RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 E5RJQ4 531 aa28.61■■■□□ 2.17
HDAC3-201ENST00000305264 ZMYND10O75800 440 aa28.61■■■□□ 2.17
HDAC3-201ENST00000305264 CYLC1P35663 651 aaPredicted RBP28.61■■■□□ 2.17
HDAC3-201ENST00000305264 RPL34P49207 117 aaKnown RBP28.61■■■□□ 2.17
HDAC3-201ENST00000305264 ADIGQ0VDE8 80 aa28.61■■■□□ 2.17
HDAC3-201ENST00000305264 RAB41Q5JT25 222 aa28.61■■■□□ 2.17
HDAC3-201ENST00000305264 PPM1LQ5SGD2 360 aa28.61■■■□□ 2.17
HDAC3-201ENST00000305264 CCDC122Q5T0U0 273 aa28.61■■■□□ 2.17
HDAC3-201ENST00000305264 ACAD10Q6JQN1 1059 aa28.61■■■□□ 2.17
HDAC3-201ENST00000305264 MMS22LQ6ZRQ5 1243 aa28.61■■■□□ 2.17
HDAC3-201ENST00000305264 HDAC7Q8WUI4 952 aa28.61■■■□□ 2.17
HDAC3-201ENST00000305264 HSFY1Q96LI6 401 aa28.61■■■□□ 2.17
HDAC3-201ENST00000305264 C11orf70Q9BRQ4 267 aa28.61■■■□□ 2.17
HDAC3-201ENST00000305264 NDUFA10O95299 355 aa28.6■■■□□ 2.17
HDAC3-201ENST00000305264 ERBB2P04626 1255 aa28.6■■■□□ 2.17
HDAC3-201ENST00000305264 MMP8P22894 467 aa28.6■■■□□ 2.17
HDAC3-201ENST00000305264 USP46P62068 366 aa28.6■■■□□ 2.17
HDAC3-201ENST00000305264 ERICH1Q86X53 443 aa28.6■■■□□ 2.17
HDAC3-201ENST00000305264 FEZF2Q8TBJ5 459 aa28.6■■■□□ 2.17
HDAC3-201ENST00000305264 EPN1Q9Y6I3 576 aaPredicted RBP28.6■■■□□ 2.17
HDAC3-201ENST00000305264 LRG1P02750 347 aa28.59■■■□□ 2.17
HDAC3-201ENST00000305264 LCP1P13796 627 aa28.59■■■□□ 2.17
HDAC3-201ENST00000305264 IFRD2Q12894 506 aaPredicted RBP28.59■■■□□ 2.17
HDAC3-201ENST00000305264 CYP4A22Q5TCH4 519 aa28.59■■■□□ 2.17
HDAC3-201ENST00000305264 DENND5BQ6ZUT9 1274 aa28.59■■■□□ 2.17
HDAC3-201ENST00000305264 MON1BQ7L1V2 547 aa28.59■■■□□ 2.17
HDAC3-201ENST00000305264 PHF13Q86YI8 300 aaPredicted RBP28.59■■■□□ 2.17
HDAC3-201ENST00000305264 DPP7Q9UHL4 492 aa28.59■■■□□ 2.17
HDAC3-201ENST00000305264 SLC38A8A6NNN8 435 aa28.59■■■□□ 2.17
HDAC3-201ENST00000305264 CCL16O15467 120 aa28.59■■■□□ 2.17
HDAC3-201ENST00000305264 RTN2O75298 545 aa28.59■■■□□ 2.17
HDAC3-201ENST00000305264 FTLP02792 175 aaPredicted RBP28.59■■■□□ 2.17
HDAC3-201ENST00000305264 TKTL1P51854 596 aa28.59■■■□□ 2.17
HDAC3-201ENST00000305264 EPHB3P54753 998 aa28.59■■■□□ 2.17
HDAC3-201ENST00000305264 PTP4A2Q12974 167 aa28.59■■■□□ 2.17
HDAC3-201ENST00000305264 PLD1Q13393 1074 aa28.59■■■□□ 2.17
HDAC3-201ENST00000305264 TMEM110Q86TL2 294 aa28.59■■■□□ 2.17
HDAC3-201ENST00000305264 NUP93Q8N1F7 819 aa28.59■■■□□ 2.17
HDAC3-201ENST00000305264 CASP10Q92851 521 aa28.59■■■□□ 2.17
HDAC3-201ENST00000305264 ISCUQ9H1K1 167 aa28.59■■■□□ 2.17
HDAC3-201ENST00000305264 SYNCQ9H7C4 482 aa28.59■■■□□ 2.17
HDAC3-201ENST00000305264 LRRC4Q9HBW1 653 aa28.59■■■□□ 2.17
HDAC3-201ENST00000305264 XIRP2A4UGR9 3374 aa28.58■■■□□ 2.17
HDAC3-201ENST00000305264 SPDYE4A6NLX3 237 aa28.58■■■□□ 2.17
HDAC3-201ENST00000305264 ARHGAP6O43182 974 aa28.58■■■□□ 2.17
HDAC3-201ENST00000305264 LCA5LO95447 670 aa28.58■■■□□ 2.17
HDAC3-201ENST00000305264 IPO4Q8TEX9 1081 aaKnown RBP28.58■■■□□ 2.17
HDAC3-201ENST00000305264 CYLDQ9NQC7 956 aa28.58■■■□□ 2.17
HDAC3-201ENST00000305264 EIF3CLB5ME19 914 aaKnown RBP28.57■■■□□ 2.16
HDAC3-201ENST00000305264 VEPH1Q14D04 833 aa28.57■■■□□ 2.16
HDAC3-201ENST00000305264 RTL10Q7L3V2 364 aa28.57■■■□□ 2.16
HDAC3-201ENST00000305264 C12orf76Q8N812 135 aaPredicted RBP28.57■■■□□ 2.16
HDAC3-201ENST00000305264 CLEC4CQ8WTT0 213 aa28.57■■■□□ 2.16
HDAC3-201ENST00000305264 CEP295NLQ96MC4 621 aa28.57■■■□□ 2.16
HDAC3-201ENST00000305264 EIF3CQ99613 913 aaKnown RBP28.57■■■□□ 2.16
HDAC3-201ENST00000305264 ADAM22Q9P0K1 906 aa28.57■■■□□ 2.16
HDAC3-201ENST00000305264 SPTBN5Q9NRC6 3674 aaKnown RBP28.57■■■□□ 2.16
HDAC3-201ENST00000305264 DOCK6Q96HP0 2047 aa28.57■■■□□ 2.16
HDAC3-201ENST00000305264 HOXA9P31269 272 aa28.57■■■□□ 2.16
HDAC3-201ENST00000305264 ACADSBP45954 432 aa28.57■■■□□ 2.16
HDAC3-201ENST00000305264 ELMSAN1Q6PJG2 1045 aa28.57■■■□□ 2.16
HDAC3-201ENST00000305264 TMEM184AQ6ZMB5 413 aa28.57■■■□□ 2.16
HDAC3-201ENST00000305264 TOGARAM2Q6ZUX3 1019 aa28.57■■■□□ 2.16
HDAC3-201ENST00000305264 MCOLN2Q8IZK6 566 aa28.57■■■□□ 2.16
HDAC3-201ENST00000305264 SIX6OS1Q8N1H7 587 aa28.57■■■□□ 2.16
HDAC3-201ENST00000305264 ACRBPQ8NEB7 543 aa28.57■■■□□ 2.16
HDAC3-201ENST00000305264 PSMG2Q969U7 264 aa28.57■■■□□ 2.16
HDAC3-201ENST00000305264 DESI2Q9BSY9 194 aa28.57■■■□□ 2.16
HDAC3-201ENST00000305264 PACSIN1Q9BY11 444 aa28.57■■■□□ 2.16
HDAC3-201ENST00000305264 ULBP1Q9BZM6 244 aa28.57■■■□□ 2.16
HDAC3-201ENST00000305264 MIS12Q9H081 205 aa28.57■■■□□ 2.16
HDAC3-201ENST00000305264 MAGED2Q9UNF1 606 aaPredicted RBP28.57■■■□□ 2.16
HDAC3-201ENST00000305264 BRWD1Q9NSI6 2320 aa28.56■■■□□ 2.16
HDAC3-201ENST00000305264 PAPSS1O43252 624 aaPredicted RBP28.56■■■□□ 2.16
HDAC3-201ENST00000305264 NRDCO43847 1150 aa28.56■■■□□ 2.16
HDAC3-201ENST00000305264 HMGA1P17096 107 aaKnown RBP28.56■■■□□ 2.16
HDAC3-201ENST00000305264 GABRB2P47870 512 aa28.56■■■□□ 2.16
HDAC3-201ENST00000305264 ADAM15Q13444 863 aa28.56■■■□□ 2.16
HDAC3-201ENST00000305264 SCUBE3Q8IX30 993 aa28.56■■■□□ 2.16
HDAC3-201ENST00000305264 MSANTD4Q8NCY6 345 aa28.56■■■□□ 2.16
HDAC3-201ENST00000305264 ZDHHC7Q9NXF8 308 aa28.56■■■□□ 2.16
HDAC3-201ENST00000305264 REXO2Q9Y3B8 237 aaKnown RBP28.56■■■□□ 2.16
HDAC3-201ENST00000305264 USP3Q9Y6I4 520 aa28.56■■■□□ 2.16
HDAC3-201ENST00000305264 C1QBPQ07021 282 aaKnown RBP28.55■■■□□ 2.16
HDAC3-201ENST00000305264 PHLDB2Q86SQ0 1253 aa28.55■■■□□ 2.16
HDAC3-201ENST00000305264 NDRG1Q92597 394 aaKnown RBP28.55■■■□□ 2.16
HDAC3-201ENST00000305264 C18orf8Q96DM3 657 aa28.55■■■□□ 2.16
HDAC3-201ENST00000305264 PIWIL1Q96J94 861 aaKnown RBP28.55■■■□□ 2.16
HDAC3-201ENST00000305264 DZANK1Q9NVP4 752 aa28.55■■■□□ 2.16
HDAC3-201ENST00000305264 MTMR10Q9NXD2 777 aa28.55■■■□□ 2.16
HDAC3-201ENST00000305264 ATMINO43313 823 aaPredicted RBP28.55■■■□□ 2.16
HDAC3-201ENST00000305264 HNRNPA1P09651 372 aaKnown RBP eCLIP28.55■■■□□ 2.16
HDAC3-201ENST00000305264 USP17L7P0C7H9 530 aa28.55■■■□□ 2.16
HDAC3-201ENST00000305264 CSH1P0DML2 217 aa28.55■■■□□ 2.16
HDAC3-201ENST00000305264 CSH2P0DML3 217 aa28.55■■■□□ 2.16
HDAC3-201ENST00000305264 ABCB4P21439 1286 aa28.55■■■□□ 2.16
HDAC3-201ENST00000305264 PPP1R2P3Q6NXS1 205 aa28.55■■■□□ 2.16
HDAC3-201ENST00000305264 FAM183BPQ6ZVS7 135 aa28.55■■■□□ 2.16
HDAC3-201ENST00000305264 DNAJB7Q7Z6W7 309 aaPredicted RBP28.55■■■□□ 2.16
HDAC3-201ENST00000305264 XYLT1Q86Y38 959 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms