RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 KCTD6Q8NC69 237 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 FBXO36Q8NEA4 188 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 ACTL9Q8TC94 416 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 FBF1Q8TES7 1133 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 DCPSQ96C86 337 aaKnown RBP7.55□□□□□ -1.2
RGPD3-201ENST00000304514 GRAMD1AQ96CP6 724 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 L3MBTL3Q96JM7 780 aaPredicted RBP7.55□□□□□ -1.2
RGPD3-201ENST00000304514 FDXACB1Q9BRP7 624 aaPredicted RBP7.55□□□□□ -1.2
RGPD3-201ENST00000304514 DPP3Q9NY33 737 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 GGT7Q9UJ14 662 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 C2CD2Q9Y426 696 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 TTLL3Q9Y4R7 772 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 CEP83Q9Y592 693 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 ZNF487B1APH4 448 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 GOLGA8MH3BSY2 632 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 KRT19P08727 400 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 ARF4P18085 180 aaPredicted RBP7.55□□□□□ -1.2
RGPD3-201ENST00000304514 CETN2P41208 172 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 HADHQ16836 314 aaKnown RBP7.55□□□□□ -1.2
RGPD3-201ENST00000304514 PREPLQ4J6C6 727 aaPredicted RBP7.55□□□□□ -1.2
RGPD3-201ENST00000304514 SPDYAQ5MJ70 313 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 RFX6Q8HWS3 928 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 PLD5Q8N7P1 536 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 AFG1LQ8WV93 481 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 SNX27Q96L92 541 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 ADPGKQ9BRR6 497 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 ACSS3Q9H6R3 686 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 PHTF1Q9UMS5 762 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 DERAQ9Y315 318 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 SMAPO00193 183 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 CHADO15335 359 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 SUN1O94901 812 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 ZWINTO95229 277 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 VTNP04004 478 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 DHRS4L1P0CG22 281 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 INSRRP14616 1297 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 STX2P32856 288 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 SKIV2L2P42285 1042 aaKnown RBP7.55□□□□□ -1.2
RGPD3-201ENST00000304514 MAGEA3P43357 314 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 IL9RQ01113 521 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 RNASELQ05823 741 aaKnown RBP7.55□□□□□ -1.2
RGPD3-201ENST00000304514 TMEM132DQ14C87 1099 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 CCDC125Q86Z20 511 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 FAM71DQ8N9W8 422 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 UBA3Q8TBC4 463 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 SPOCK2Q92563 424 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 CCDC77Q9BR77 488 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 MRPL45Q9BRJ2 306 aaKnown RBP7.55□□□□□ -1.2
RGPD3-201ENST00000304514 TEX264Q9Y6I9 313 aa7.55□□□□□ -1.2
RGPD3-201ENST00000304514 A0A1B0GUA9 196 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 INO80B-WBP1J3KQ70 363 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 ADCY6O43306 1168 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 TGM2P21980 687 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 NDST1P52848 882 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 KCNJ2P63252 427 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 ADCY1Q08828 1119 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 GOLGA7BQ2TAP0 167 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 FAM47CQ5HY64 1035 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 NT5DC4Q86YG4 428 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 ANKRD13AQ8IZ07 590 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 TEKT4Q8WW24 435 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 HPDLQ96IR7 371 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 PAFAH2Q99487 392 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 TCHPQ9BT92 498 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 INO80BQ9C086 356 aaPredicted RBP7.54□□□□□ -1.2
RGPD3-201ENST00000304514 ASNSD1Q9NWL6 643 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 SENP1Q9P0U3 644 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 PTPRDP23468 1912 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 ASB14A6NK59 587 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 H0YHG0 523 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 NPTXRO95502 500 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 GRM5P41594 1212 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 ARL4CP56559 192 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 ZBTB6Q15916 424 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 ZNF467Q7Z7K2 595 aaPredicted RBP7.54□□□□□ -1.2
RGPD3-201ENST00000304514 DYDC1Q8WWB3 177 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 CENPIQ92674 756 aaPredicted RBP7.54□□□□□ -1.2
RGPD3-201ENST00000304514 ADAM33Q9BZ11 813 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 VPS37BQ9H9H4 285 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 RSAD1Q9HA92 442 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 SLC45A1Q9Y2W3 748 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 EDF1O60869 148 aaKnown RBP7.54□□□□□ -1.2
RGPD3-201ENST00000304514 ATP2C2O75185 946 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 NRLP54845 237 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 EIF3EP60228 445 aaKnown RBP7.54□□□□□ -1.2
RGPD3-201ENST00000304514 ROR1Q01973 937 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 LAMC2Q13753 1193 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 KCTD2Q14681 263 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 LIMS2Q7Z4I7 341 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 TTC30AQ86WT1 665 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 SERAC1Q96JX3 654 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 SLC4A5Q9BY07 1137 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 USP3Q9Y6I4 520 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 E5RJQ4 531 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 PDE4CQ08493 712 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 SF3A3Q12874 501 aaKnown RBP eCLIP7.54□□□□□ -1.2
RGPD3-201ENST00000304514 R3HDM1Q15032 1099 aaKnown RBP7.54□□□□□ -1.2
RGPD3-201ENST00000304514 ZNF534Q76KX8 674 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 NKIRAS1Q9NYS0 192 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 CNTN3Q9P232 1028 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms