RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 ZNF518BQ9C0D4 1074 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 FGFR2P21802 821 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 USP18Q9UMW8 372 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 NRXN1Q9ULB1 1477 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 HEATR9A2RTY3 570 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 EVPLLA8MZ36 301 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 CPT1AP50416 773 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 SKOR1P84550 965 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 TRIM60Q495X7 471 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 UNC45BQ8IWX7 931 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 CRLS1Q9UJA2 301 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 KBTBD12Q3ZCT8 623 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 GNASQ5JWF2 1037 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 SCN3BQ9NY72 215 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 STX7O15400 261 aaKnown RBP14.43□□□□□ -0.1
PRKCB-201ENST00000303531 EFCAB14O75071 495 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 PGK2P07205 417 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 RPS12P25398 132 aaKnown RBP14.43□□□□□ -0.1
PRKCB-201ENST00000303531 ZNF157P51786 506 aaPredicted RBP14.43□□□□□ -0.1
PRKCB-201ENST00000303531 FUT11Q495W5 492 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 ATP6V0D2Q8N8Y2 350 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 TRMT6Q9UJA5 497 aaKnown RBP14.43□□□□□ -0.1
PRKCB-201ENST00000303531 PRG3Q9Y2Y8 225 aaPredicted RBP14.43□□□□□ -0.1
PRKCB-201ENST00000303531 M0R3G1 203 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 H2AFYO75367 372 aaKnown RBP14.42□□□□□ -0.1
PRKCB-201ENST00000303531 GLRBP48167 497 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 RAP1GDS1P52306 607 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 TTC33Q6PID6 262 aaPredicted RBP14.42□□□□□ -0.1
PRKCB-201ENST00000303531 SLFN11Q7Z7L1 901 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 TUBGCP3Q96CW5 907 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 PRPF18Q99633 342 aaKnown RBP14.42□□□□□ -0.1
PRKCB-201ENST00000303531 KIAA1257Q9ULG3 409 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 ALBP02768 609 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 SOAT1P35610 550 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 FAM117BQ6P1L5 589 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 GMCL1Q96IK5 515 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 IARS2Q9NSE4 1012 aaKnown RBP14.42□□□□□ -0.1
PRKCB-201ENST00000303531 SELENONQ9NZV5 590 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 TFE3P19532 575 aaPredicted RBP14.42□□□□□ -0.1
PRKCB-201ENST00000303531 MAPRE1Q15691 268 aaKnown RBP14.42□□□□□ -0.1
PRKCB-201ENST00000303531 CCNG2Q16589 344 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 MTMR8Q96EF0 704 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 ZDHHC15Q96MV8 337 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 WWOXQ9NZC7 414 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 AAR2Q9Y312 384 aaKnown RBP14.42□□□□□ -0.1
PRKCB-201ENST00000303531 PSMA4P25789 261 aaKnown RBP14.42□□□□□ -0.1
PRKCB-201ENST00000303531 HSPA13P48723 471 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 AQP5P55064 265 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 PSMC6P62333 389 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 IRX1P78414 480 aaPredicted RBP14.42□□□□□ -0.1
PRKCB-201ENST00000303531 MCL1Q07820 350 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 SLC7A5P2Q9GIP4 190 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 EXOSC4Q9NPD3 245 aaKnown RBP14.42□□□□□ -0.1
PRKCB-201ENST00000303531 TIMM44O43615 452 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 THRAP10827 490 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 GMCL1P1Q8NEA9 526 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 CHST12Q9NRB3 414 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 CISHQ9NSE2 258 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 VPS9D1Q9Y2B5 631 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 SALL3Q9BXA9 1300 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 C17orf102A2RUQ5 167 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 O00370 1275 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 STAG3L1P0CL83 205 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 TDRD10Q5VZ19 366 aaKnown RBP14.42□□□□□ -0.1
PRKCB-201ENST00000303531 MRNIPQ6NTE8 343 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 MTDHQ86UE4 582 aaKnown RBP14.42□□□□□ -0.1
PRKCB-201ENST00000303531 SCUBE1Q8IWY4 988 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 EMC1Q8N766 993 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 VPS37AQ8NEZ2 397 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 RPRD1AQ96P16 312 aaPredicted RBP14.42□□□□□ -0.1
PRKCB-201ENST00000303531 RIOX1Q9H6W3 641 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 RNF112Q9ULX5 631 aa14.42□□□□□ -0.1
PRKCB-201ENST00000303531 CETPP11597 493 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 DPEP1P16444 411 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 P3H2Q8IVL5 708 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 PLEKHA8Q96JA3 519 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 DNAJC16Q9Y2G8 782 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 SLC2A3P11169 496 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 CLK1P49759 484 aaKnown RBP14.41□□□□□ -0.1
PRKCB-201ENST00000303531 MYL6P60660 151 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 HES6Q96HZ4 224 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 CPB2Q96IY4 423 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 THUMPD3Q9BV44 507 aaKnown RBP14.41□□□□□ -0.1
PRKCB-201ENST00000303531 TMEM120AQ9BXJ8 343 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 LRRC40Q9H9A6 602 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 HPS4Q9NQG7 708 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 MAGEA13PA6NCF6 341 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 PTENP60484 403 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 PCNX4Q63HM2 1172 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 CD302Q8IX05 232 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 ANKRD13AQ8IZ07 590 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 AGXT2Q9BYV1 514 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 CYLC2Q14093 348 aaPredicted RBP14.41□□□□□ -0.1
PRKCB-201ENST00000303531 SLC26A11Q86WA9 606 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 ZFYVE28Q9HCC9 887 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 AP4E1Q9UPM8 1137 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 VWA5AO00534 786 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 LSM8O95777 96 aaKnown RBP14.41□□□□□ -0.1
PRKCB-201ENST00000303531 EARS2Q5JPH6 523 aaKnown RBP14.41□□□□□ -0.1
PRKCB-201ENST00000303531 ZNF484Q5JVG2 852 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms