RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 APOPT1Q96IL0 206 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 BTBD10Q9BSF8 475 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 IRX2Q9BZI1 471 aaPredicted RBP7.9□□□□□ -1.14
SF3B3-201ENST00000302516 FER1L4A9Z1Z3 1794 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 BNIP3LO60238 219 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 CST8O60676 142 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 NBNO60934 754 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 VPS26AO75436 327 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 STAT5BP51692 787 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 HK2P52789 917 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 PLEKHA7Q6IQ23 1121 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 ZNF544Q6NX49 715 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 IRGCQ6NXR0 463 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 CRELD2Q6UXH1 353 aaPredicted RBP7.9□□□□□ -1.14
SF3B3-201ENST00000302516 LRRC74BQ6ZQY2 392 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 TDRD5Q8NAT2 981 aaKnown RBP7.9□□□□□ -1.14
SF3B3-201ENST00000302516 PAFAH2Q99487 392 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 NYAP2Q9P242 653 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 KLHL3Q9UH77 587 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 HAO1Q9UJM8 370 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 L1RE1Q9UN81 338 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 SLC30A1Q9Y6M5 507 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 ALADP13716 330 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 MYL6P60660 151 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 SLC34A1Q06495 639 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 CLEC16AQ2KHT3 1053 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 FAM98BQ52LJ0 330 aaKnown RBP7.9□□□□□ -1.14
SF3B3-201ENST00000302516 MFSD14CQ5VZR4 134 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 LDHDQ86WU2 507 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 ZNF507Q8TCN5 953 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 KCNB2Q92953 911 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 C9orf16Q9BUW7 83 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 EXOSC4Q9NPD3 245 aaKnown RBP7.9□□□□□ -1.14
SF3B3-201ENST00000302516 UTP6Q9NYH9 597 aaKnown RBP7.9□□□□□ -1.14
SF3B3-201ENST00000302516 PTPRMP28827 1452 aa7.9□□□□□ -1.15
SF3B3-201ENST00000302516 PPP3CCP48454 512 aa7.9□□□□□ -1.15
SF3B3-201ENST00000302516 ARHGEF7Q14155 803 aa7.9□□□□□ -1.15
SF3B3-201ENST00000302516 MYBPC2Q14324 1141 aa7.9□□□□□ -1.15
SF3B3-201ENST00000302516 NDUFA5Q16718 116 aa7.9□□□□□ -1.15
SF3B3-201ENST00000302516 DDR2Q16832 855 aa7.9□□□□□ -1.15
SF3B3-201ENST00000302516 SP8Q8IXZ3 490 aa7.9□□□□□ -1.15
SF3B3-201ENST00000302516 ZBTB10Q96DT7 871 aa7.9□□□□□ -1.15
SF3B3-201ENST00000302516 PCDH9Q9HC56 1237 aa7.9□□□□□ -1.15
SF3B3-201ENST00000302516 TMCC3Q9ULS5 477 aa7.9□□□□□ -1.15
SF3B3-201ENST00000302516 CHD2O14647 1828 aaKnown RBP7.9□□□□□ -1.15
SF3B3-201ENST00000302516 MYBP10242 640 aa7.9□□□□□ -1.15
SF3B3-201ENST00000302516 RBP3P10745 1247 aa7.9□□□□□ -1.15
SF3B3-201ENST00000302516 SNAP25P60880 206 aa7.9□□□□□ -1.15
SF3B3-201ENST00000302516 TBL3Q12788 808 aaKnown RBP7.9□□□□□ -1.15
SF3B3-201ENST00000302516 GOLGA7BQ2TAP0 167 aa7.9□□□□□ -1.15
SF3B3-201ENST00000302516 MROH9Q5TGP6 573 aa7.9□□□□□ -1.15
SF3B3-201ENST00000302516 GPAT2Q6NUI2 795 aa7.9□□□□□ -1.15
SF3B3-201ENST00000302516 AENQ8WTP8 325 aaKnown RBP7.9□□□□□ -1.15
SF3B3-201ENST00000302516 PRR23AA6NEV1 266 aa7.9□□□□□ -1.15
SF3B3-201ENST00000302516 CNOT3O75175 753 aaKnown RBP7.9□□□□□ -1.15
SF3B3-201ENST00000302516 MAGEA10P43363 369 aaPredicted RBP7.9□□□□□ -1.15
SF3B3-201ENST00000302516 INAQ16352 499 aa7.9□□□□□ -1.15
SF3B3-201ENST00000302516 LPCAT2Q7L5N7 544 aa7.9□□□□□ -1.15
SF3B3-201ENST00000302516 STARD8Q92502 1023 aa7.9□□□□□ -1.15
SF3B3-201ENST00000302516 ZNF669Q96BR6 464 aaPredicted RBP7.9□□□□□ -1.15
SF3B3-201ENST00000302516 SLC10A4Q96EP9 437 aa7.9□□□□□ -1.15
SF3B3-201ENST00000302516 RPL26L1Q9UNX3 145 aaKnown RBP7.9□□□□□ -1.15
SF3B3-201ENST00000302516 CLCA2Q9UQC9 943 aa7.9□□□□□ -1.15
SF3B3-201ENST00000302516 MYRFQ9Y2G1 1151 aa7.9□□□□□ -1.15
SF3B3-201ENST00000302516 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.89□□□□□ -1.15
SF3B3-201ENST00000302516 CENPXA8MT69 81 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 C19orf81C9J6K1 198 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 KLRC1P26715 233 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 SERPINB5P36952 375 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 PRIM2P49643 509 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 CACNA2D1P54289 1103 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 UBE3AQ05086 875 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 ATF7IP2Q5U623 682 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 ARMC3Q5W041 872 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 NOTUMQ6P988 496 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 ASB2Q96Q27 587 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 CAMKK2Q96RR4 588 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 CINPQ9BW66 212 aaPredicted RBP7.89□□□□□ -1.15
SF3B3-201ENST00000302516 TEX13BQ9BXU2 312 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 HMG20AQ9NP66 347 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 AFF2P51816 1311 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 PRR36Q9H6K5 1346 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 CCDC88AQ3V6T2 1871 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 F8VZ95 297 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 ABLIM1O14639 778 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 MED26O95402 600 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 NT5DC1Q5TFE4 455 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 TRIQKQ629K1 86 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 FAM45BPQ6NSW5 357 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 MTDHQ86UE4 582 aaKnown RBP7.89□□□□□ -1.15
SF3B3-201ENST00000302516 LRRC40Q9H9A6 602 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 C8orf4Q9NR00 106 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 POLG2Q9UHN1 485 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 SNX13Q9Y5W8 968 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 MROH7Q68CQ1 1323 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 DIP2BQ9P265 1576 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 SPEF2Q9C093 1822 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 TCN1P20061 433 aaPredicted RBP7.89□□□□□ -1.15
SF3B3-201ENST00000302516 CDK7P50613 346 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 CCNG2Q16589 344 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms