RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 PTPN4P29074 926 aa13.83□□□□□ -0.19
CASC4-201ENST00000299957 PEX5P50542 639 aa13.83□□□□□ -0.19
CASC4-201ENST00000299957 DRG2P55039 364 aaKnown RBP13.83□□□□□ -0.19
CASC4-201ENST00000299957 NME5P56597 212 aa13.83□□□□□ -0.19
CASC4-201ENST00000299957 SURF1Q15526 300 aa13.83□□□□□ -0.19
CASC4-201ENST00000299957 PDCD2Q16342 344 aaPredicted RBP13.83□□□□□ -0.19
CASC4-201ENST00000299957 SCG3Q8WXD2 468 aaKnown RBP13.83□□□□□ -0.19
CASC4-201ENST00000299957 FDXACB1Q9BRP7 624 aaPredicted RBP13.83□□□□□ -0.19
CASC4-201ENST00000299957 RSAD1Q9HA92 442 aa13.83□□□□□ -0.19
CASC4-201ENST00000299957 IGKV6D-41A0A0C4DH26 115 aa13.83□□□□□ -0.2
CASC4-201ENST00000299957 EDIL3O43854 480 aa13.83□□□□□ -0.2
CASC4-201ENST00000299957 USP1O94782 785 aa13.83□□□□□ -0.2
CASC4-201ENST00000299957 HMGCRP04035 888 aa13.83□□□□□ -0.2
CASC4-201ENST00000299957 MLH1P40692 756 aa13.83□□□□□ -0.2
CASC4-201ENST00000299957 NOMO3P69849 1222 aa13.83□□□□□ -0.2
CASC4-201ENST00000299957 SLC25A3Q00325 362 aa13.83□□□□□ -0.2
CASC4-201ENST00000299957 PCSK7Q16549 785 aa13.83□□□□□ -0.2
CASC4-201ENST00000299957 BZW1Q7L1Q6 419 aaKnown RBP13.83□□□□□ -0.2
CASC4-201ENST00000299957 ZNF677Q86XU0 584 aa13.83□□□□□ -0.2
CASC4-201ENST00000299957 ZCCHC9Q8N567 271 aaKnown RBP13.83□□□□□ -0.2
CASC4-201ENST00000299957 PDZD8Q8NEN9 1154 aa13.83□□□□□ -0.2
CASC4-201ENST00000299957 USP13Q92995 863 aaPredicted RBP13.83□□□□□ -0.2
CASC4-201ENST00000299957 WNK4Q96J92 1243 aa13.83□□□□□ -0.2
CASC4-201ENST00000299957 SLITRK1Q96PX8 696 aa13.83□□□□□ -0.2
CASC4-201ENST00000299957 PTPRHQ9HD43 1115 aa13.83□□□□□ -0.2
CASC4-201ENST00000299957 NOCTQ9UK39 431 aaKnown RBP13.83□□□□□ -0.2
CASC4-201ENST00000299957 DFFAO00273 331 aa13.83□□□□□ -0.2
CASC4-201ENST00000299957 CASQ2O14958 399 aaPredicted RBP13.83□□□□□ -0.2
CASC4-201ENST00000299957 EEF1B2P24534 225 aaKnown RBP13.83□□□□□ -0.2
CASC4-201ENST00000299957 GNL1P36915 607 aaPredicted RBP13.83□□□□□ -0.2
CASC4-201ENST00000299957 EFNA5P52803 228 aa13.83□□□□□ -0.2
CASC4-201ENST00000299957 WDR4P57081 412 aaKnown RBP13.83□□□□□ -0.2
CASC4-201ENST00000299957 ITGA9Q13797 1035 aa13.83□□□□□ -0.2
CASC4-201ENST00000299957 DCLRE1BQ9H816 532 aa13.83□□□□□ -0.2
CASC4-201ENST00000299957 ZNF395Q9H8N7 513 aaPredicted RBP13.83□□□□□ -0.2
CASC4-201ENST00000299957 BATF3Q9NR55 127 aa13.83□□□□□ -0.2
CASC4-201ENST00000299957 MTO1Q9Y2Z2 717 aaKnown RBP13.83□□□□□ -0.2
CASC4-201ENST00000299957 TELO2Q9Y4R8 837 aa13.83□□□□□ -0.2
CASC4-201ENST00000299957 ROBO3Q96MS0 1386 aa13.83□□□□□ -0.2
CASC4-201ENST00000299957 E5RJQ4 531 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 CALB2P22676 271 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 ZC3H12AQ5D1E8 599 aaKnown RBP13.82□□□□□ -0.2
CASC4-201ENST00000299957 VSTM1Q6UX27 236 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 TRIM67Q6ZTA4 783 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 TRABD2AQ86V40 505 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 SCN4BQ8IWT1 228 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 FAM13CQ8NE31 585 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 STK32AQ8WU08 396 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 CGRRF1Q99675 332 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 NT5C1AQ9BXI3 368 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 TASP1Q9H6P5 420 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 RNPEPL1Q9HAU8 725 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 ETS2P15036 469 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 BACE1P56817 501 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 PTPN11Q06124 597 aaPredicted RBP13.82□□□□□ -0.2
CASC4-201ENST00000299957 MED21Q13503 144 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 KIF19Q2TAC6 998 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 TATDN1Q6P1N9 297 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 DSTYKQ6XUX3 929 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 NMD3Q96D46 503 aaKnown RBP13.82□□□□□ -0.2
CASC4-201ENST00000299957 CYP4F12Q9HCS2 524 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 TIMM13Q9Y5L4 95 aaPredicted RBP13.82□□□□□ -0.2
CASC4-201ENST00000299957 KIF1CO43896 1103 aaKnown RBP13.82□□□□□ -0.2
CASC4-201ENST00000299957 HUS1O60921 280 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 CETPP11597 493 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 AMPD1P23109 780 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 PLIN5Q00G26 463 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 ZACNQ401N2 412 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 ZNF572Q7Z3I7 529 aaPredicted RBP13.82□□□□□ -0.2
CASC4-201ENST00000299957 ZDHHC14Q8IZN3 488 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 EIF1ADQ8N9N8 165 aaKnown RBP13.82□□□□□ -0.2
CASC4-201ENST00000299957 ATXN3LQ9H3M9 355 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 SUDS3Q9H7L9 328 aaPredicted RBP13.82□□□□□ -0.2
CASC4-201ENST00000299957 PCDH9Q9HC56 1237 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 ARL8BQ9NVJ2 186 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 DONSONQ9NYP3 566 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 PIN4Q9Y237 131 aaKnown RBP13.82□□□□□ -0.2
CASC4-201ENST00000299957 MYH7P12883 1935 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 TOPAZ1Q8N9V7 1692 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 DUOX1Q9NRD9 1551 aa13.82□□□□□ -0.2
CASC4-201ENST00000299957 XPO1O14980 1071 aaKnown RBP13.81□□□□□ -0.2
CASC4-201ENST00000299957 CTSHP09668 335 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 ACAT1P24752 427 aaKnown RBP13.81□□□□□ -0.2
CASC4-201ENST00000299957 SULT1E1P49888 294 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 NUDT2P50583 147 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 LAMTOR4Q0VGL1 99 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 PEX6Q13608 980 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 CNGA3Q16281 694 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 MAP3K21Q5TCX8 1036 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 EEF1DP3Q658K8 133 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 PDZD4Q76G19 769 aaPredicted RBP13.81□□□□□ -0.2
CASC4-201ENST00000299957 SCUBE1Q8IWY4 988 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 CENPTQ96BT3 561 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 PAK5Q9P286 719 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 AURKCQ9UQB9 309 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 AK5Q9Y6K8 562 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 MROH7Q68CQ1 1323 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 SUPT3HO75486 399 aa13.81□□□□□ -0.2
CASC4-201ENST00000299957 LYPLA1O75608 230 aaPredicted RBP13.81□□□□□ -0.2
CASC4-201ENST00000299957 RXRBP28702 533 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms