RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 COL19A1Q14993 1142 aa29.24■■■□□ 2.27
CHCHD4-201ENST00000295767 PTPN20Q4JDL3 420 aa29.24■■■□□ 2.27
CHCHD4-201ENST00000295767 RAB41Q5JT25 222 aa29.24■■■□□ 2.27
CHCHD4-201ENST00000295767 DENND5BQ6ZUT9 1274 aa29.24■■■□□ 2.27
CHCHD4-201ENST00000295767 NUP93Q8N1F7 819 aa29.24■■■□□ 2.27
CHCHD4-201ENST00000295767 C12orf76Q8N812 135 aaPredicted RBP29.24■■■□□ 2.27
CHCHD4-201ENST00000295767 FEZF2Q8TBJ5 459 aa29.24■■■□□ 2.27
CHCHD4-201ENST00000295767 HSFY1Q96LI6 401 aa29.24■■■□□ 2.27
CHCHD4-201ENST00000295767 NOX5Q96PH1 765 aa29.24■■■□□ 2.27
CHCHD4-201ENST00000295767 SLC4A5Q9BY07 1137 aa29.24■■■□□ 2.27
CHCHD4-201ENST00000295767 SFXN1Q9H9B4 322 aa29.24■■■□□ 2.27
CHCHD4-201ENST00000295767 CLDND1Q9NY35 253 aa29.24■■■□□ 2.27
CHCHD4-201ENST00000295767 TJP2Q9UDY2 1190 aa29.24■■■□□ 2.27
CHCHD4-201ENST00000295767 PIK3R2O00459 728 aa29.23■■■□□ 2.27
CHCHD4-201ENST00000295767 AKR1B10O60218 316 aa29.23■■■□□ 2.27
CHCHD4-201ENST00000295767 RPL34P49207 117 aaKnown RBP29.23■■■□□ 2.27
CHCHD4-201ENST00000295767 USP46P62068 366 aa29.23■■■□□ 2.27
CHCHD4-201ENST00000295767 IFRD2Q12894 506 aaPredicted RBP29.23■■■□□ 2.27
CHCHD4-201ENST00000295767 SCAMP5Q8TAC9 235 aa29.23■■■□□ 2.27
CHCHD4-201ENST00000295767 PPP1R13BQ96KQ4 1090 aa29.23■■■□□ 2.27
CHCHD4-201ENST00000295767 LRRC4Q9HBW1 653 aa29.23■■■□□ 2.27
CHCHD4-201ENST00000295767 CCDC195A0A1B0GUA6 201 aa29.23■■■□□ 2.27
CHCHD4-201ENST00000295767 TMCO5BA8MYB1 307 aa29.23■■■□□ 2.27
CHCHD4-201ENST00000295767 NCK2O43639 380 aa29.23■■■□□ 2.27
CHCHD4-201ENST00000295767 TBX10O75333 385 aa29.23■■■□□ 2.27
CHCHD4-201ENST00000295767 NSFP46459 744 aaKnown RBP29.23■■■□□ 2.27
CHCHD4-201ENST00000295767 ADIGQ0VDE8 80 aa29.23■■■□□ 2.27
CHCHD4-201ENST00000295767 CCDC85BQ15834 202 aaPredicted RBP29.23■■■□□ 2.27
CHCHD4-201ENST00000295767 SLC18A3Q16572 532 aa29.23■■■□□ 2.27
CHCHD4-201ENST00000295767 ACAD10Q6JQN1 1059 aa29.23■■■□□ 2.27
CHCHD4-201ENST00000295767 ANKRD54Q6NXT1 300 aa29.23■■■□□ 2.27
CHCHD4-201ENST00000295767 PSMG2Q969U7 264 aa29.23■■■□□ 2.27
CHCHD4-201ENST00000295767 SPTLC3Q9NUV7 552 aa29.23■■■□□ 2.27
CHCHD4-201ENST00000295767 NENFQ9UMX5 172 aa29.23■■■□□ 2.27
CHCHD4-201ENST00000295767 DENND4CQ5VZ89 1909 aa29.23■■■□□ 2.27
CHCHD4-201ENST00000295767 NOTCH4Q99466 2003 aa29.22■■■□□ 2.27
CHCHD4-201ENST00000295767 E5RJQ4 531 aa29.22■■■□□ 2.27
CHCHD4-201ENST00000295767 CSH1P0DML2 217 aa29.22■■■□□ 2.27
CHCHD4-201ENST00000295767 CSH2P0DML3 217 aa29.22■■■□□ 2.27
CHCHD4-201ENST00000295767 GZMAP12544 262 aa29.22■■■□□ 2.27
CHCHD4-201ENST00000295767 LCP1P13796 627 aa29.22■■■□□ 2.27
CHCHD4-201ENST00000295767 TKTL1P51854 596 aa29.22■■■□□ 2.27
CHCHD4-201ENST00000295767 EP400NLQ6ZTU2 488 aa29.22■■■□□ 2.27
CHCHD4-201ENST00000295767 ERICH1Q86X53 443 aa29.22■■■□□ 2.27
CHCHD4-201ENST00000295767 DNAAF5Q86Y56 855 aa29.22■■■□□ 2.27
CHCHD4-201ENST00000295767 ZNF707Q96C28 371 aaPredicted RBP29.22■■■□□ 2.27
CHCHD4-201ENST00000295767 PABPC5Q96DU9 382 aaKnown RBP29.22■■■□□ 2.27
CHCHD4-201ENST00000295767 PRKD2Q9BZL6 878 aa29.22■■■□□ 2.27
CHCHD4-201ENST00000295767 CYLDQ9NQC7 956 aa29.22■■■□□ 2.27
CHCHD4-201ENST00000295767 CLEC1BQ9P126 229 aa29.22■■■□□ 2.27
CHCHD4-201ENST00000295767 NAGPAQ9UK23 515 aa29.22■■■□□ 2.27
CHCHD4-201ENST00000295767 MAGED2Q9UNF1 606 aaPredicted RBP29.22■■■□□ 2.27
CHCHD4-201ENST00000295767 ASB3Q9Y575 518 aa29.22■■■□□ 2.27
CHCHD4-201ENST00000295767 HMGA1P17096 107 aaKnown RBP29.21■■■□□ 2.27
CHCHD4-201ENST00000295767 DLX2Q07687 328 aaPredicted RBP29.21■■■□□ 2.27
CHCHD4-201ENST00000295767 MTF1Q14872 753 aa29.21■■■□□ 2.27
CHCHD4-201ENST00000295767 C2CD6Q53TS8 623 aa29.21■■■□□ 2.27
CHCHD4-201ENST00000295767 TMC5Q6UXY8 1006 aa29.21■■■□□ 2.27
CHCHD4-201ENST00000295767 DNAJB7Q7Z6W7 309 aaPredicted RBP29.21■■■□□ 2.27
CHCHD4-201ENST00000295767 TMEM110Q86TL2 294 aa29.21■■■□□ 2.27
CHCHD4-201ENST00000295767 ITIH5Q86UX2 942 aa29.21■■■□□ 2.27
CHCHD4-201ENST00000295767 ELMOD1Q8N336 334 aa29.21■■■□□ 2.27
CHCHD4-201ENST00000295767 RTN3O95197 1032 aaPredicted RBP29.2■■■□□ 2.27
CHCHD4-201ENST00000295767 PAPLNO95428 1278 aa29.2■■■□□ 2.27
CHCHD4-201ENST00000295767 ERBB2P04626 1255 aa29.2■■■□□ 2.27
CHCHD4-201ENST00000295767 MMP8P22894 467 aa29.2■■■□□ 2.27
CHCHD4-201ENST00000295767 LTBRP36941 435 aa29.2■■■□□ 2.27
CHCHD4-201ENST00000295767 ACADSBP45954 432 aa29.2■■■□□ 2.27
CHCHD4-201ENST00000295767 RARS2Q5T160 578 aaKnown RBP29.2■■■□□ 2.27
CHCHD4-201ENST00000295767 ALKBH5Q6P6C2 394 aaKnown RBP29.2■■■□□ 2.27
CHCHD4-201ENST00000295767 SYCE2Q6PIF2 218 aa29.2■■■□□ 2.27
CHCHD4-201ENST00000295767 RAD9BQ6WBX8 426 aa29.2■■■□□ 2.27
CHCHD4-201ENST00000295767 MMS22LQ6ZRQ5 1243 aa29.2■■■□□ 2.27
CHCHD4-201ENST00000295767 PHF13Q86YI8 300 aaPredicted RBP29.2■■■□□ 2.27
CHCHD4-201ENST00000295767 CCDC170Q8IYT3 715 aa29.2■■■□□ 2.27
CHCHD4-201ENST00000295767 CCDC112Q8NEF3 446 aa29.2■■■□□ 2.27
CHCHD4-201ENST00000295767 CMASQ8NFW8 434 aaPredicted RBP29.2■■■□□ 2.27
CHCHD4-201ENST00000295767 IPO4Q8TEX9 1081 aaKnown RBP29.2■■■□□ 2.27
CHCHD4-201ENST00000295767 ZNF512Q96ME7 567 aaPredicted RBP29.2■■■□□ 2.27
CHCHD4-201ENST00000295767 C11orf70Q9BRQ4 267 aa29.2■■■□□ 2.27
CHCHD4-201ENST00000295767 TTLL2Q9BWV7 592 aa29.2■■■□□ 2.27
CHCHD4-201ENST00000295767 IL37Q9NZH6 218 aa29.2■■■□□ 2.27
CHCHD4-201ENST00000295767 USP3Q9Y6I4 520 aa29.2■■■□□ 2.27
CHCHD4-201ENST00000295767 ANAPC1Q9H1A4 1944 aa29.2■■■□□ 2.27
CHCHD4-201ENST00000295767 BRWD1Q9NSI6 2320 aa29.2■■■□□ 2.26
CHCHD4-201ENST00000295767 XYLBO75191 536 aa29.2■■■□□ 2.26
CHCHD4-201ENST00000295767 RTN2O75298 545 aa29.2■■■□□ 2.26
CHCHD4-201ENST00000295767 POU2F2P09086 479 aa29.2■■■□□ 2.26
CHCHD4-201ENST00000295767 TAF12Q16514 161 aa29.2■■■□□ 2.26
CHCHD4-201ENST00000295767 CCDC122Q5T0U0 273 aa29.2■■■□□ 2.26
CHCHD4-201ENST00000295767 MON1BQ7L1V2 547 aa29.2■■■□□ 2.26
CHCHD4-201ENST00000295767 SIX6OS1Q8N1H7 587 aa29.2■■■□□ 2.26
CHCHD4-201ENST00000295767 APOL5Q9BWW9 433 aa29.2■■■□□ 2.26
CHCHD4-201ENST00000295767 ULBP1Q9BZM6 244 aa29.2■■■□□ 2.26
CHCHD4-201ENST00000295767 ISCUQ9H1K1 167 aa29.2■■■□□ 2.26
CHCHD4-201ENST00000295767 SYNCQ9H7C4 482 aa29.2■■■□□ 2.26
CHCHD4-201ENST00000295767 HCFC1R1Q9NWW0 138 aa29.2■■■□□ 2.26
CHCHD4-201ENST00000295767 CCZ1BP86790 482 aa29.19■■■□□ 2.26
CHCHD4-201ENST00000295767 CCZ1P86791 482 aaPredicted RBP29.19■■■□□ 2.26
CHCHD4-201ENST00000295767 PTP4A2Q12974 167 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms