RNA–Protein interactions for RNA: ENST00000295008.8

MRPL55-201, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-201ENST00000295008 SPDYE4A6NLX3 237 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 SLC38A8A6NNN8 435 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 ZNF263O14978 683 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 NRDCO43847 1150 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 RTN2O75298 545 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 RFPL2O75678 378 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 NDUFA10O95299 355 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 GZMAP12544 262 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 LCP1P13796 627 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 MMP8P22894 467 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 ACADSBP45954 432 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 RPL34P49207 117 aaKnown RBP16.75■□□□□ 0.27
MRPL55-201ENST00000295008 EPHB3P54753 998 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 IFRD2Q12894 506 aaPredicted RBP16.75■□□□□ 0.27
MRPL55-201ENST00000295008 MTMR3Q13615 1198 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 VEPH1Q14D04 833 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 C2CD6Q53TS8 623 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 RTL10Q7L3V2 364 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 ERICH1Q86X53 443 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 PHF13Q86YI8 300 aaPredicted RBP16.75■□□□□ 0.27
MRPL55-201ENST00000295008 NUP93Q8N1F7 819 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 MSANTD4Q8NCY6 345 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 IPO4Q8TEX9 1081 aaKnown RBP16.75■□□□□ 0.27
MRPL55-201ENST00000295008 CASP10Q92851 521 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 CEP295NLQ96MC4 621 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 ZNF830Q96NB3 372 aaPredicted RBP16.75■□□□□ 0.27
MRPL55-201ENST00000295008 GUCD1Q96NT3 240 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 ISCUQ9H1K1 167 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 LRRC4Q9HBW1 653 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 CYLDQ9NQC7 956 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 DZANK1Q9NVP4 752 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 EPN1Q9Y6I3 576 aaPredicted RBP16.75■□□□□ 0.27
MRPL55-201ENST00000295008 MYO16Q9Y6X6 1858 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 MYH10P35580 1976 aa16.75■□□□□ 0.27
MRPL55-201ENST00000295008 EIF3CLB5ME19 914 aaKnown RBP16.74■□□□□ 0.27
MRPL55-201ENST00000295008 CCL16O15467 120 aa16.74■□□□□ 0.27
MRPL55-201ENST00000295008 ARHGAP6O43182 974 aa16.74■□□□□ 0.27
MRPL55-201ENST00000295008 LCA5LO95447 670 aa16.74■□□□□ 0.27
MRPL55-201ENST00000295008 FTLP02792 175 aaPredicted RBP16.74■□□□□ 0.27
MRPL55-201ENST00000295008 HNRNPA1P09651 372 aaKnown RBP eCLIP16.74■□□□□ 0.27
MRPL55-201ENST00000295008 HOXA9P31269 272 aa16.74■□□□□ 0.27
MRPL55-201ENST00000295008 TKTL1P51854 596 aa16.74■□□□□ 0.27
MRPL55-201ENST00000295008 USP46P62068 366 aa16.74■□□□□ 0.27
MRPL55-201ENST00000295008 C1QBPQ07021 282 aaKnown RBP16.74■□□□□ 0.27
MRPL55-201ENST00000295008 PTP4A2Q12974 167 aa16.74■□□□□ 0.27
MRPL55-201ENST00000295008 CYP4A22Q5TCH4 519 aa16.74■□□□□ 0.27
MRPL55-201ENST00000295008 PPP1R2P3Q6NXS1 205 aa16.74■□□□□ 0.27
MRPL55-201ENST00000295008 DENND5BQ6ZUT9 1274 aa16.74■□□□□ 0.27
MRPL55-201ENST00000295008 TMEM110Q86TL2 294 aa16.74■□□□□ 0.27
MRPL55-201ENST00000295008 SIX6OS1Q8N1H7 587 aa16.74■□□□□ 0.27
MRPL55-201ENST00000295008 SCAMP5Q8TAC9 235 aa16.74■□□□□ 0.27
MRPL55-201ENST00000295008 EIF3CQ99613 913 aaKnown RBP16.74■□□□□ 0.27
MRPL55-201ENST00000295008 ULBP1Q9BZM6 244 aa16.74■□□□□ 0.27
MRPL55-201ENST00000295008 SYNCQ9H7C4 482 aa16.74■□□□□ 0.27
MRPL55-201ENST00000295008 ZDHHC7Q9NXF8 308 aa16.74■□□□□ 0.27
MRPL55-201ENST00000295008 ADAM22Q9P0K1 906 aa16.74■□□□□ 0.27
MRPL55-201ENST00000295008 TRANK1O15050 2925 aa16.73■□□□□ 0.27
MRPL55-201ENST00000295008 GREB1Q4ZG55 1949 aa16.73■□□□□ 0.27
MRPL55-201ENST00000295008 RTN3O95197 1032 aaPredicted RBP16.73■□□□□ 0.27
MRPL55-201ENST00000295008 CALB1P05937 261 aa16.73■□□□□ 0.27
MRPL55-201ENST00000295008 CSH1P0DML2 217 aa16.73■□□□□ 0.27
MRPL55-201ENST00000295008 CSH2P0DML3 217 aa16.73■□□□□ 0.27
MRPL55-201ENST00000295008 SRGAP2BP0DMP2 458 aa16.73■□□□□ 0.27
MRPL55-201ENST00000295008 GABRB2P47870 512 aa16.73■□□□□ 0.27
MRPL55-201ENST00000295008 ADAM15Q13444 863 aa16.73■□□□□ 0.27
MRPL55-201ENST00000295008 TMEM184AQ6ZMB5 413 aa16.73■□□□□ 0.27
MRPL55-201ENST00000295008 TOGARAM2Q6ZUX3 1019 aa16.73■□□□□ 0.27
MRPL55-201ENST00000295008 FAM183BPQ6ZVS7 135 aa16.73■□□□□ 0.27
MRPL55-201ENST00000295008 ITIH5Q86UX2 942 aa16.73■□□□□ 0.27
MRPL55-201ENST00000295008 MCOLN2Q8IZK6 566 aa16.73■□□□□ 0.27
MRPL55-201ENST00000295008 C12orf76Q8N812 135 aaPredicted RBP16.73■□□□□ 0.27
MRPL55-201ENST00000295008 ACRBPQ8NEB7 543 aa16.73■□□□□ 0.27
MRPL55-201ENST00000295008 PSMG2Q969U7 264 aa16.73■□□□□ 0.27
MRPL55-201ENST00000295008 C18orf8Q96DM3 657 aa16.73■□□□□ 0.27
MRPL55-201ENST00000295008 DESI2Q9BSY9 194 aa16.73■□□□□ 0.27
MRPL55-201ENST00000295008 TTLL2Q9BWV7 592 aa16.73■□□□□ 0.27
MRPL55-201ENST00000295008 PACSIN1Q9BY11 444 aa16.73■□□□□ 0.27
MRPL55-201ENST00000295008 MIS12Q9H081 205 aa16.73■□□□□ 0.27
MRPL55-201ENST00000295008 SFXN1Q9H9B4 322 aa16.73■□□□□ 0.27
MRPL55-201ENST00000295008 MAGED2Q9UNF1 606 aaPredicted RBP16.73■□□□□ 0.27
MRPL55-201ENST00000295008 USP3Q9Y6I4 520 aa16.73■□□□□ 0.27
MRPL55-201ENST00000295008 NCANO14594 1321 aa16.72■□□□□ 0.27
MRPL55-201ENST00000295008 PAPSS1O43252 624 aaPredicted RBP16.72■□□□□ 0.27
MRPL55-201ENST00000295008 IPO7O95373 1038 aaKnown RBP16.72■□□□□ 0.27
MRPL55-201ENST00000295008 USP17L7P0C7H9 530 aa16.72■□□□□ 0.27
MRPL55-201ENST00000295008 FOSL2P15408 326 aa16.72■□□□□ 0.27
MRPL55-201ENST00000295008 HMGA1P17096 107 aaKnown RBP16.72■□□□□ 0.27
MRPL55-201ENST00000295008 ABCB4P21439 1286 aa16.72■□□□□ 0.27
MRPL55-201ENST00000295008 SNX16P57768 344 aa16.72■□□□□ 0.27
MRPL55-201ENST00000295008 SPA17Q15506 151 aa16.72■□□□□ 0.27
MRPL55-201ENST00000295008 OR6B2Q6IFH4 312 aa16.72■□□□□ 0.27
MRPL55-201ENST00000295008 DNAJB7Q7Z6W7 309 aaPredicted RBP16.72■□□□□ 0.27
MRPL55-201ENST00000295008 PHLDB2Q86SQ0 1253 aa16.72■□□□□ 0.27
MRPL55-201ENST00000295008 XYLT1Q86Y38 959 aa16.72■□□□□ 0.27
MRPL55-201ENST00000295008 ELMOD1Q8N336 334 aa16.72■□□□□ 0.27
MRPL55-201ENST00000295008 FEZF2Q8TBJ5 459 aa16.72■□□□□ 0.27
MRPL55-201ENST00000295008 CLEC4CQ8WTT0 213 aa16.72■□□□□ 0.27
MRPL55-201ENST00000295008 ZNF707Q96C28 371 aaPredicted RBP16.72■□□□□ 0.27
MRPL55-201ENST00000295008 ZNF653Q96CK0 615 aa16.72■□□□□ 0.27
MRPL55-201ENST00000295008 CNGB3Q9NQW8 809 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms