RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 GAB4Q2WGN9 574 aa26.85■■□□□ 1.89
U2AF1-201ENST00000291552 PFKLP17858 780 aa26.84■■□□□ 1.89
U2AF1-201ENST00000291552 PXNP49023 591 aaPredicted RBP26.84■■□□□ 1.89
U2AF1-201ENST00000291552 AP3M2P53677 418 aa26.84■■□□□ 1.89
U2AF1-201ENST00000291552 SLC7A9P82251 487 aa26.84■■□□□ 1.89
U2AF1-201ENST00000291552 ZACNQ401N2 412 aa26.84■■□□□ 1.89
U2AF1-201ENST00000291552 ZNF667Q5HYK9 610 aa26.84■■□□□ 1.89
U2AF1-201ENST00000291552 FAM35AQ86V20 835 aa26.84■■□□□ 1.89
U2AF1-201ENST00000291552 GPR161Q8N6U8 529 aaKnown RBP26.84■■□□□ 1.89
U2AF1-201ENST00000291552 GOLPH3LQ9H4A5 285 aa26.84■■□□□ 1.89
U2AF1-201ENST00000291552 USP18Q9UMW8 372 aa26.84■■□□□ 1.89
U2AF1-201ENST00000291552 MED19A0JLT2 244 aaPredicted RBP26.83■■□□□ 1.89
U2AF1-201ENST00000291552 MYL1P05976 194 aa26.83■■□□□ 1.89
U2AF1-201ENST00000291552 DRD1P21728 446 aa26.83■■□□□ 1.89
U2AF1-201ENST00000291552 CNR2P34972 360 aa26.83■■□□□ 1.89
U2AF1-201ENST00000291552 SYKP43405 635 aa26.83■■□□□ 1.89
U2AF1-201ENST00000291552 AMPD2Q01433 879 aa26.83■■□□□ 1.89
U2AF1-201ENST00000291552 SPEM2Q0P670 501 aa26.83■■□□□ 1.89
U2AF1-201ENST00000291552 DGLUCYQ7Z3D6 616 aa26.83■■□□□ 1.89
U2AF1-201ENST00000291552 CD101Q93033 1021 aa26.83■■□□□ 1.89
U2AF1-201ENST00000291552 KCNK16Q96T55 309 aa26.83■■□□□ 1.89
U2AF1-201ENST00000291552 HMGXB4Q9UGU5 601 aa26.83■■□□□ 1.89
U2AF1-201ENST00000291552 RETP07949 1114 aa26.82■■□□□ 1.88
U2AF1-201ENST00000291552 PDE6CP51160 858 aa26.82■■□□□ 1.88
U2AF1-201ENST00000291552 DPYDQ12882 1025 aa26.82■■□□□ 1.88
U2AF1-201ENST00000291552 IFRD2Q12894 506 aaPredicted RBP26.82■■□□□ 1.88
U2AF1-201ENST00000291552 TMC2Q8TDI7 906 aa26.82■■□□□ 1.88
U2AF1-201ENST00000291552 EHD2Q9NZN4 543 aa26.82■■□□□ 1.88
U2AF1-201ENST00000291552 TRAF3IP3Q9Y228 551 aa26.82■■□□□ 1.88
U2AF1-201ENST00000291552 CPQQ9Y646 472 aa26.82■■□□□ 1.88
U2AF1-201ENST00000291552 TNFRSF10BO14763 440 aa26.81■■□□□ 1.88
U2AF1-201ENST00000291552 SCAMP3O14828 347 aaKnown RBP26.81■■□□□ 1.88
U2AF1-201ENST00000291552 RHOBTB3O94955 611 aa26.81■■□□□ 1.88
U2AF1-201ENST00000291552 OPRD1P41143 372 aa26.81■■□□□ 1.88
U2AF1-201ENST00000291552 PPP3CCP48454 512 aa26.81■■□□□ 1.88
U2AF1-201ENST00000291552 ORC1Q13415 861 aa26.81■■□□□ 1.88
U2AF1-201ENST00000291552 SPOPLQ6IQ16 392 aa26.81■■□□□ 1.88
U2AF1-201ENST00000291552 SV2AQ7L0J3 742 aa26.81■■□□□ 1.88
U2AF1-201ENST00000291552 FUKQ8N0W3 1084 aa26.81■■□□□ 1.88
U2AF1-201ENST00000291552 SMPD4Q9NXE4 827 aa26.81■■□□□ 1.88
U2AF1-201ENST00000291552 MYO18AQ92614 2054 aaKnown RBP26.8■■□□□ 1.88
U2AF1-201ENST00000291552 ANTXRLA6NF34 631 aa26.8■■□□□ 1.88
U2AF1-201ENST00000291552 NFATC1O95644 943 aa26.8■■□□□ 1.88
U2AF1-201ENST00000291552 CYP17A1P05093 508 aa26.8■■□□□ 1.88
U2AF1-201ENST00000291552 ASPAP45381 313 aa26.8■■□□□ 1.88
U2AF1-201ENST00000291552 LMNB2Q03252 620 aa26.8■■□□□ 1.88
U2AF1-201ENST00000291552 CEP135Q66GS9 1140 aa26.8■■□□□ 1.88
U2AF1-201ENST00000291552 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.8■■□□□ 1.88
U2AF1-201ENST00000291552 FILIP1Q7Z7B0 1213 aa26.8■■□□□ 1.88
U2AF1-201ENST00000291552 ACOT1Q86TX2 421 aa26.8■■□□□ 1.88
U2AF1-201ENST00000291552 NUP93Q8N1F7 819 aa26.8■■□□□ 1.88
U2AF1-201ENST00000291552 FAM160A2Q8N612 972 aaPredicted RBP26.8■■□□□ 1.88
U2AF1-201ENST00000291552 ZMIZ2Q8NF64 920 aa26.8■■□□□ 1.88
U2AF1-201ENST00000291552 RPLP0P6Q8NHW5 317 aa26.8■■□□□ 1.88
U2AF1-201ENST00000291552 SCAMP5Q8TAC9 235 aa26.8■■□□□ 1.88
U2AF1-201ENST00000291552 ATG13O75143 517 aa26.79■■□□□ 1.88
U2AF1-201ENST00000291552 CLSTN1O94985 981 aa26.79■■□□□ 1.88
U2AF1-201ENST00000291552 ABL1P00519 1130 aa26.79■■□□□ 1.88
U2AF1-201ENST00000291552 ASS1P00966 412 aaKnown RBP26.79■■□□□ 1.88
U2AF1-201ENST00000291552 HLA-DRAP01903 254 aa26.79■■□□□ 1.88
U2AF1-201ENST00000291552 YWHAQP27348 245 aa26.79■■□□□ 1.88
U2AF1-201ENST00000291552 FBXO43Q4G163 708 aa26.79■■□□□ 1.88
U2AF1-201ENST00000291552 KRBA2Q6ZNG9 492 aa26.79■■□□□ 1.88
U2AF1-201ENST00000291552 FBXO32Q969P5 355 aa26.79■■□□□ 1.88
U2AF1-201ENST00000291552 ZFRQ96KR1 1074 aaKnown RBP26.79■■□□□ 1.88
U2AF1-201ENST00000291552 SLITRK1Q96PX8 696 aa26.79■■□□□ 1.88
U2AF1-201ENST00000291552 HHIPQ96QV1 700 aa26.79■■□□□ 1.88
U2AF1-201ENST00000291552 MED10Q9BTT4 135 aa26.79■■□□□ 1.88
U2AF1-201ENST00000291552 KRT82Q9NSB4 513 aa26.79■■□□□ 1.88
U2AF1-201ENST00000291552 IL37Q9NZH6 218 aa26.79■■□□□ 1.88
U2AF1-201ENST00000291552 SLC8A2Q9UPR5 921 aa26.79■■□□□ 1.88
U2AF1-201ENST00000291552 DYNC1LI1Q9Y6G9 523 aaKnown RBP26.79■■□□□ 1.88
U2AF1-201ENST00000291552 CCDC163A0A0D9SF12 145 aa26.78■■□□□ 1.88
U2AF1-201ENST00000291552 A0A1W2PQ27 194 aa26.78■■□□□ 1.88
U2AF1-201ENST00000291552 A0A1W2PQ64 194 aa26.78■■□□□ 1.88
U2AF1-201ENST00000291552 A0A1W2PQD8 194 aa26.78■■□□□ 1.88
U2AF1-201ENST00000291552 CALUO43852 315 aaPredicted RBP26.78■■□□□ 1.88
U2AF1-201ENST00000291552 RTN3O95197 1032 aaPredicted RBP26.78■■□□□ 1.88
U2AF1-201ENST00000291552 CCDC130P13994 396 aa26.78■■□□□ 1.88
U2AF1-201ENST00000291552 SLC5A3P53794 718 aa26.78■■□□□ 1.88
U2AF1-201ENST00000291552 NFIL3Q16649 462 aa26.78■■□□□ 1.88
U2AF1-201ENST00000291552 SGSM1Q2NKQ1 1148 aa26.78■■□□□ 1.88
U2AF1-201ENST00000291552 CEP68Q76N32 757 aa26.78■■□□□ 1.88
U2AF1-201ENST00000291552 GAB3Q8WWW8 586 aa26.78■■□□□ 1.88
U2AF1-201ENST00000291552 SMARCD1Q96GM5 515 aa26.78■■□□□ 1.88
U2AF1-201ENST00000291552 TNIP3Q96KP6 325 aa26.78■■□□□ 1.88
U2AF1-201ENST00000291552 SMOQ99835 787 aa26.78■■□□□ 1.88
U2AF1-201ENST00000291552 DMAP1Q9NPF5 467 aaPredicted RBP26.78■■□□□ 1.88
U2AF1-201ENST00000291552 CFAP97Q9P2B7 532 aa26.78■■□□□ 1.88
U2AF1-201ENST00000291552 MAPK8IP1Q9UQF2 711 aa26.78■■□□□ 1.88
U2AF1-201ENST00000291552 ATP8B3O60423 1300 aa26.78■■□□□ 1.88
U2AF1-201ENST00000291552 PRR5-ARHGAP8B1AHC4 643 aa26.77■■□□□ 1.88
U2AF1-201ENST00000291552 IKBKBO14920 756 aa26.77■■□□□ 1.88
U2AF1-201ENST00000291552 LRP3O75074 770 aa26.77■■□□□ 1.88
U2AF1-201ENST00000291552 AKAP3O75969 853 aa26.77■■□□□ 1.88
U2AF1-201ENST00000291552 BEST1O76090 585 aa26.77■■□□□ 1.88
U2AF1-201ENST00000291552 TRIM49P0CI25 452 aa26.77■■□□□ 1.88
U2AF1-201ENST00000291552 TRIM49CP0CI26 452 aa26.77■■□□□ 1.88
U2AF1-201ENST00000291552 NDST1P52848 882 aa26.77■■□□□ 1.88
U2AF1-201ENST00000291552 ATXN1P54253 815 aaKnown RBP26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms