RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 ARSAP15289 507 aa10.39□□□□□ -0.75
CCDC58-201ENST00000291458 ANP32AP39687 249 aaKnown RBP10.39□□□□□ -0.75
CCDC58-201ENST00000291458 MAGEA11P43364 429 aa10.39□□□□□ -0.75
CCDC58-201ENST00000291458 ASPAP45381 313 aa10.39□□□□□ -0.75
CCDC58-201ENST00000291458 MXI1P50539 228 aa10.39□□□□□ -0.75
CCDC58-201ENST00000291458 STX17P56962 302 aa10.39□□□□□ -0.75
CCDC58-201ENST00000291458 PON2Q15165 354 aa10.39□□□□□ -0.75
CCDC58-201ENST00000291458 EDRF1Q3B7T1 1238 aa10.39□□□□□ -0.75
CCDC58-201ENST00000291458 ZNF394Q53GI3 561 aa10.39□□□□□ -0.75
CCDC58-201ENST00000291458 ANKRD40Q6AI12 368 aa10.39□□□□□ -0.75
CCDC58-201ENST00000291458 VSTM1Q6UX27 236 aa10.39□□□□□ -0.75
CCDC58-201ENST00000291458 DENND5BQ6ZUT9 1274 aa10.39□□□□□ -0.75
CCDC58-201ENST00000291458 CELF5Q8N6W0 485 aaKnown RBP10.39□□□□□ -0.75
CCDC58-201ENST00000291458 CCDC150Q8NCX0 1101 aa10.39□□□□□ -0.75
CCDC58-201ENST00000291458 FAM3CQ92520 227 aa10.39□□□□□ -0.75
CCDC58-201ENST00000291458 E2F7Q96AV8 911 aa10.39□□□□□ -0.75
CCDC58-201ENST00000291458 TWNKQ96RR1 684 aa10.39□□□□□ -0.75
CCDC58-201ENST00000291458 DDX23Q9BUQ8 820 aaKnown RBP10.39□□□□□ -0.75
CCDC58-201ENST00000291458 ELOVL4Q9GZR5 314 aa10.39□□□□□ -0.75
CCDC58-201ENST00000291458 EBF3Q9H4W6 596 aa10.39□□□□□ -0.75
CCDC58-201ENST00000291458 SMPD4Q9NXE4 827 aa10.39□□□□□ -0.75
CCDC58-201ENST00000291458 DLGAP2Q9P1A6 1054 aa10.39□□□□□ -0.75
CCDC58-201ENST00000291458 MRPS17Q9Y2R5 130 aaKnown RBP10.39□□□□□ -0.75
CCDC58-201ENST00000291458 WNT6Q9Y6F9 365 aa10.39□□□□□ -0.75
CCDC58-201ENST00000291458 SHISA7A6NL88 538 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 SPECC1L-ADORA2AF8WAN1 911 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 CHADO15335 359 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 LAMTOR5O43504 91 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 GFRA3O60609 400 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 STAU1O95793 577 aaKnown RBP10.38□□□□□ -0.75
CCDC58-201ENST00000291458 ASS1P00966 412 aaKnown RBP10.38□□□□□ -0.75
CCDC58-201ENST00000291458 CTHP32929 405 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 CLDN10P78369 228 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 CSTF1Q05048 431 aaKnown RBP10.38□□□□□ -0.75
CCDC58-201ENST00000291458 FCHO2Q0JRZ9 810 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 LRMPQ12912 555 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 STIM1Q13586 685 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 CAMK4Q16566 473 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 NFIL3Q16649 462 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 SGSM1Q2NKQ1 1148 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 CCDC40Q4G0X9 1142 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 ARHGAP29Q52LW3 1261 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 CC2D1AQ6P1N0 951 aaPredicted RBP10.38□□□□□ -0.75
CCDC58-201ENST00000291458 TXNDC11Q6PKC3 985 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 TSSK4Q6SA08 328 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 MON1AQ86VX9 555 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 C1orf210Q8IVY1 113 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 C12orf29Q8N999 325 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 SLC2A14Q8TDB8 520 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 NELFBQ8WX92 580 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 SEMA4DQ92854 862 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 FBXO32Q969P5 355 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 TRMT2BQ96GJ1 504 aaKnown RBP10.38□□□□□ -0.75
CCDC58-201ENST00000291458 TNIP3Q96KP6 325 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 GSDMAQ96QA5 445 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 KCNK16Q96T55 309 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 ARID3AQ99856 593 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 NIF3L1Q9GZT8 377 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 TMEM8AQ9HCN3 771 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 DMAP1Q9NPF5 467 aaPredicted RBP10.38□□□□□ -0.75
CCDC58-201ENST00000291458 TDP1Q9NUW8 608 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 THG1LQ9NWX6 298 aaKnown RBP10.38□□□□□ -0.75
CCDC58-201ENST00000291458 CACNA1IQ9P0X4 2223 aa10.38□□□□□ -0.75
CCDC58-201ENST00000291458 ARNTLO00327 626 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 MAN2B1O00754 1011 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 PSMA7O14818 248 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 MAPK13O15264 365 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 USP17L7P0C7H9 530 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 DDX6P26196 483 aaKnown RBP eCLIP10.37□□□□□ -0.75
CCDC58-201ENST00000291458 IFNAR2P48551 515 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 SLC5A3P53794 718 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 MAP3K7CLP57077 242 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 TAF10Q12962 218 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 USP4Q13107 963 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 MTAPQ13126 283 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 MTF1Q14872 753 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 CBWD6Q4V339 395 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 CBWD3Q5JTY5 395 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 CBWD5Q5RIA9 395 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 NAIF1Q69YI7 327 aaPredicted RBP10.37□□□□□ -0.75
CCDC58-201ENST00000291458 KRT39Q6A163 491 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 Q6ZS52 159 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 ADSSL1Q8N142 457 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 SCAMP5Q8TAC9 235 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 SH3RF2Q8TEC5 729 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 SMARCD1Q96GM5 515 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 SPATA17Q96L03 361 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 C8orf48Q96LL4 319 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 TIGD1Q96MW7 591 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 IRF2BPLQ9H1B7 796 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 KDM4CQ9H3R0 1056 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 VRTNQ9H8Y1 702 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 KIF9Q9HAQ2 790 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 LMAN1LQ9HAT1 526 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 HPS4Q9NQG7 708 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 GKN1Q9NS71 199 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 TRPM5Q9NZQ8 1165 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 CHMP5Q9NZZ3 219 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 GMIPQ9P107 970 aa10.37□□□□□ -0.75
CCDC58-201ENST00000291458 F5P12259 2224 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms