RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 LEFTY2O00292 366 aa10.14□□□□□ -0.79
HMHB1-201ENST00000289448 TNFRSF10BO14763 440 aa10.14□□□□□ -0.79
HMHB1-201ENST00000289448 SCAMP3O14828 347 aaKnown RBP10.14□□□□□ -0.79
HMHB1-201ENST00000289448 BEST1O76090 585 aa10.14□□□□□ -0.79
HMHB1-201ENST00000289448 ZNF202O95125 648 aa10.14□□□□□ -0.79
HMHB1-201ENST00000289448 OLFM2O95897 454 aa10.14□□□□□ -0.79
HMHB1-201ENST00000289448 ASS1P00966 412 aaKnown RBP10.14□□□□□ -0.79
HMHB1-201ENST00000289448 OAS1P00973 400 aaKnown RBP10.14□□□□□ -0.79
HMHB1-201ENST00000289448 HLA-DRAP01903 254 aa10.14□□□□□ -0.79
HMHB1-201ENST00000289448 TRIM49P0CI25 452 aa10.14□□□□□ -0.79
HMHB1-201ENST00000289448 TRIM49CP0CI26 452 aa10.14□□□□□ -0.79
HMHB1-201ENST00000289448 ASPAP45381 313 aa10.14□□□□□ -0.79
HMHB1-201ENST00000289448 IFNAR2P48551 515 aa10.14□□□□□ -0.79
HMHB1-201ENST00000289448 PXNP49023 591 aaPredicted RBP10.14□□□□□ -0.79
HMHB1-201ENST00000289448 PGFP49763 221 aa10.14□□□□□ -0.79
HMHB1-201ENST00000289448 SLC7A9P82251 487 aa10.14□□□□□ -0.79
HMHB1-201ENST00000289448 PPP3CAQ08209 521 aa10.14□□□□□ -0.79
HMHB1-201ENST00000289448 GRSF1Q12849 480 aaKnown RBP eCLIP10.14□□□□□ -0.79
HMHB1-201ENST00000289448 PPP2R5DQ14738 602 aa10.14□□□□□ -0.79
HMHB1-201ENST00000289448 GAB4Q2WGN9 574 aa10.14□□□□□ -0.79
HMHB1-201ENST00000289448 ACOT1Q86TX2 421 aa10.14□□□□□ -0.79
HMHB1-201ENST00000289448 FAM35AQ86V20 835 aa10.14□□□□□ -0.79
HMHB1-201ENST00000289448 SMYD4Q8IYR2 804 aaPredicted RBP10.14□□□□□ -0.79
HMHB1-201ENST00000289448 FUKQ8N0W3 1084 aa10.14□□□□□ -0.79
HMHB1-201ENST00000289448 ZMIZ2Q8NF64 920 aa10.14□□□□□ -0.79
HMHB1-201ENST00000289448 APOBEC3GQ9HC16 384 aaKnown RBP10.14□□□□□ -0.79
HMHB1-201ENST00000289448 SMPD4Q9NXE4 827 aa10.14□□□□□ -0.79
HMHB1-201ENST00000289448 NCDNQ9UBB6 729 aa10.14□□□□□ -0.79
HMHB1-201ENST00000289448 FRMD4BQ9Y2L6 1034 aa10.14□□□□□ -0.79
HMHB1-201ENST00000289448 EPG5Q9HCE0 2579 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 CHD8Q9HCK8 2581 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 IKBKBO14920 756 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 CALUO43852 315 aaPredicted RBP10.13□□□□□ -0.79
HMHB1-201ENST00000289448 RNF40O75150 1001 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 ABL1P00519 1130 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 CCDC130P13994 396 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 NR2F2P24468 414 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 YWHAQP27348 245 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 HOXA6P31267 233 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 GCLMP48507 274 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 VAMP7P51809 220 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 NDST1P52848 882 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 SLC5A3P53794 718 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 MESP2Q0VG99 397 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 IFRD2Q12894 506 aaPredicted RBP10.13□□□□□ -0.79
HMHB1-201ENST00000289448 NFIL3Q16649 462 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 SGSM1Q2NKQ1 1148 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 ZCWPW2Q504Y3 356 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 LONP2Q86WA8 852 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 FMR1NBQ8N0W7 255 aaPredicted RBP10.13□□□□□ -0.79
HMHB1-201ENST00000289448 NUP93Q8N1F7 819 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 GUF1Q8N442 669 aaKnown RBP10.13□□□□□ -0.79
HMHB1-201ENST00000289448 CPA6Q8N4T0 437 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 C12orf29Q8N999 325 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 TAS1R2Q8TE23 839 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 ATP2A3Q93084 1043 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 EEF2KMTQ96G04 330 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 ZFRQ96KR1 1074 aaKnown RBP10.13□□□□□ -0.79
HMHB1-201ENST00000289448 TWNKQ96RR1 684 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 SMOQ99835 787 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 P2RY13Q9BPV8 354 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 MED10Q9BTT4 135 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 IL37Q9NZH6 218 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 CHORDC1Q9UHD1 332 aaPredicted RBP10.13□□□□□ -0.79
HMHB1-201ENST00000289448 ATP6V1DQ9Y5K8 247 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 CPQQ9Y646 472 aa10.13□□□□□ -0.79
HMHB1-201ENST00000289448 MAPK13O15264 365 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 COCHO43405 550 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 AP1G2O75843 785 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 CLSTN1O94985 981 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 PFKLP17858 780 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 DRD1P21728 446 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 OPRD1P41143 372 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 PIK3CAP42336 1068 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 PPP3CCP48454 512 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 MCCD1P59942 119 aaPredicted RBP10.12□□□□□ -0.79
HMHB1-201ENST00000289448 ADAM9Q13443 819 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 PNOCQ13519 176 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 SIM2Q14190 667 aaPredicted RBP10.12□□□□□ -0.79
HMHB1-201ENST00000289448 PRR23BQ6ZRT6 265 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 FILIP1Q7Z7B0 1213 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 WDR5BQ86VZ2 330 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 SFTPA1Q8IWL2 248 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 FAM186BQ8IYM0 893 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 ADGRG2Q8IZP9 1017 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 CRYBG2Q8N1P7 616 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 SLC2A14Q8TDB8 520 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 TAF4BQ92750 862 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 SEMA4DQ92854 862 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 ERCC4Q92889 916 aaPredicted RBP10.12□□□□□ -0.79
HMHB1-201ENST00000289448 FBXO32Q969P5 355 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 TNIP3Q96KP6 325 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 SLITRK1Q96PX8 696 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 CCSER2Q9H7U1 834 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 KRT82Q9NSB4 513 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 FAM49BQ9NUQ9 324 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 DLL3Q9NYJ7 618 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 EHD2Q9NZN4 543 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 GMIPQ9P107 970 aa10.12□□□□□ -0.79
HMHB1-201ENST00000289448 CFAP97Q9P2B7 532 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms