RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 YWHAEP62258 255 aaKnown RBP13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 IRX1P78414 480 aaPredicted RBP13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 MRPS35P82673 323 aaKnown RBP13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 SLC18A2Q05940 514 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 SNX30Q5VWJ9 437 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 CCDC62Q6P9F0 684 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 ILDR2Q71H61 639 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 NIM1KQ8IY84 436 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 SYNCQ9H7C4 482 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 TAS2R1Q9NYW7 299 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 ARMCX1Q9P291 453 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 ANK1P16157 1881 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 DOCK1Q14185 1865 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 FAM237BA0A1B0GVD1 139 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 ENO4A6NNW6 628 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 E5RJQ4 531 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 FCHO1O14526 889 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 MIPP30301 263 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 SERPINB4P48594 390 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 BACE1P56817 501 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 CXCL9Q07325 125 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 KLC1Q07866 573 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 FSTL1Q12841 308 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 MMRN1Q13201 1228 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 DARS2Q6PI48 645 aaKnown RBP13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 ZPBP2Q6X784 338 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 SH2D5Q6ZV89 423 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 TTLL6Q8N841 843 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 WDR60Q8WVS4 1066 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 CFAP36Q96G28 342 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 OXNAD1Q96HP4 312 aaPredicted RBP13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 NIFKQ9BYG3 293 aaKnown RBP13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 TEX264Q9Y6I9 313 aa13.82□□□□□ -0.2
SLC28A1-201ENST00000286749 SPDYE5A6NIY4 337 aa13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 SMAPO00193 183 aa13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 CAPN9O14815 690 aa13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 PPP1R12AO14974 1030 aaPredicted RBP13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 MSCO60682 206 aa13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 TOM1L1O75674 476 aa13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 PSMG1O95456 288 aa13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 ERBB2P04626 1255 aa13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 ROR1Q01973 937 aa13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 CDHR3Q6ZTQ4 885 aa13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 PRPF39Q86UA1 669 aaKnown RBP13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 ALYREFQ86V81 257 aaKnown RBP13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 XYLT1Q86Y38 959 aa13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 DTX3LQ8TDB6 740 aa13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 FNIP1Q8TF40 1166 aa13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 PRPF31Q8WWY3 499 aaKnown RBP13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 SYT15Q9BQS2 421 aa13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 MRPL4Q9BYD3 311 aaKnown RBP13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 XYLT2Q9H1B5 865 aa13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 CNTN3Q9P232 1028 aa13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 CPA2P48052 419 aa13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 HMGCS2P54868 508 aa13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 OSTNP61366 133 aa13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 GRM1Q13255 1194 aa13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 KRT72Q14CN4 511 aa13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 TMEM154Q6P9G4 183 aa13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 CMASQ8NFW8 434 aaPredicted RBP13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 ZNF483Q8TF39 744 aaPredicted RBP13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 NMUR2Q9GZQ4 415 aa13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 IQCGQ9H095 443 aaKnown RBP13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 ACAD9Q9H845 621 aa13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.81□□□□□ -0.2
SLC28A1-201ENST00000286749 TRIM49D1C9J1S8 452 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 COPEO14579 308 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 OGTO15294 1046 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 TBX10O75333 385 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 SRGAP2CP0DJJ0 459 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 RFC5P40937 340 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 MXRA7P84157 204 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 KCNJ11Q14654 390 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 CTAGE3PQ8IX95 158 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 UCMAQ8WVF2 138 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 SCG3Q8WXD2 468 aaKnown RBP13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 FAM136AQ96C01 138 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 SRPK1Q96SB4 655 aaKnown RBP13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 MECRQ9BV79 373 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 USP18Q9UMW8 372 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 RNF8O76064 485 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 TRUB2O95900 331 aaKnown RBP13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 HOXC6P09630 235 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 RARBP10826 455 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 GCLCP48506 637 aaPredicted RBP13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 CDH8P55286 799 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 SLC34A1Q06495 639 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 LRRC74BQ6ZQY2 392 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 TMEM130Q8N3G9 435 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 PPM1NQ8N819 430 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 STMN2Q93045 179 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 FAF2Q96CS3 445 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 PEBP4Q96S96 227 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 PCYT2Q99447 389 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 ACO2Q99798 780 aaKnown RBP13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 LHX5Q9H2C1 402 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 ARHGEF4Q9NR80 690 aa13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 CPSF3Q9UKF6 684 aaKnown RBP13.8□□□□□ -0.2
SLC28A1-201ENST00000286749 EME2A4GXA9 379 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms