RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 TPX2Q9ULW0 747 aaKnown RBP6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 NAALADL1Q9UQQ1 740 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 OTOFQ9HC10 1997 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 CREB3O43889 395 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 HUS1O60921 280 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 HMGCRP04035 888 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 APRTP07741 180 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 PAEPP09466 180 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 NEFHP12036 1026 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 MLH1P40692 756 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 BCAR1P56945 870 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 FSCN1Q16658 493 aaKnown RBP6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 HIF1AQ16665 826 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 DCAF6Q58WW2 860 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 TRMT10CQ7L0Y3 403 aaKnown RBP6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 TAOK1Q7L7X3 1001 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 PALM2Q8IXS6 379 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 CACNA2D3Q8IZS8 1091 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 PYROXD2Q8N2H3 581 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 ARRDC4Q8NCT1 418 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 PYROXD1Q8WU10 500 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 CFAP36Q96G28 342 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 TRIM56Q9BRZ2 755 aaKnown RBP6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 RAB6BQ9NRW1 208 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 FGFR1OP2Q9NVK5 253 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 C2CD2Q9Y426 696 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 MAD1L1Q9Y6D9 718 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 CAPN7Q9Y6W3 813 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 SCN1AP35498 2009 aa6.33□□□□□ -1.4
TNFSF4-201ENST00000281834 MYO18AQ92614 2054 aaKnown RBP6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 NRCAMQ92823 1304 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 SBF1O95248 1867 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 KPNA7A9QM74 516 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 TCP11X1B4DZS4 312 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 PAPSS1O43252 624 aaPredicted RBP6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 FAM107AO95990 144 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 STX2P32856 288 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 GRM5P41594 1212 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 NDUFV1P49821 464 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 TRIM32Q13049 653 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 PPP1R15BQ5SWA1 713 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 GKAP1Q5VSY0 366 aaPredicted RBP6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 C9orf57Q5W0N0 161 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 FBXW10Q5XX13 1052 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 WSCD1Q658N2 575 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 CCDC121Q6ZUS5 278 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 ALLCQ8N6M5 410 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 APPL2Q8NEU8 664 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 CCDC110Q8TBZ0 833 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 FAF2Q96CS3 445 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 CHMP6Q96FZ7 201 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 RASSF4Q9H2L5 321 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 DDX56Q9NY93 547 aaKnown RBP6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 DDX20Q9UHI6 824 aaKnown RBP6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 NOD1Q9Y239 953 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 PPME1Q9Y570 386 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 NME7Q9Y5B8 376 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 TCRBV5S1A1TA0A578 114 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 C17orf102A2RUQ5 167 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 RRN3P2A6NIE6 340 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 A6NJR5 290 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 BHMG1C9JSJ3 638 aaPredicted RBP6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 DNALI1O14645 258 aaPredicted RBP6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 TRAPPC3O43617 180 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 GPR32O75388 356 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 TRUB2O95900 331 aaKnown RBP6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 ZBED1O96006 694 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 AGTP01019 485 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 POMCP01189 267 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 YY1P25490 414 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 KLRC2P26717 231 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 ATICP31939 592 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 RPL22P35268 128 aaKnown RBP6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 PITX1P78337 314 aaPredicted RBP6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 ROR1Q01973 937 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 LMNB2Q03252 620 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 TAP1Q03518 808 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 ENPEPQ07075 957 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 ADIGQ0VDE8 80 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 SEPT7Q16181 437 aaKnown RBP6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 MSS51Q4VC12 460 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 FAM133BQ5BKY9 247 aaKnown RBP6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 PPP1R21Q6ZMI0 780 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 C3orf62Q6ZUJ4 267 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 ZNF410Q86VK4 478 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 CXorf38Q8TB03 319 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 GTF3C2Q8WUA4 911 aaPredicted RBP6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 SEC16BQ96JE7 1060 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 CNPY3Q9BT09 278 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 LHX5Q9H2C1 402 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 ADAM7Q9H2U9 754 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 ADAMTS10Q9H324 1103 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 CYP3A43Q9HB55 503 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 NKIRAS1Q9NYS0 192 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 MORF4L1Q9UBU8 362 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 XPO7Q9UIA9 1087 aaKnown RBP6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 MFHAS1Q9Y4C4 1052 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 TTLL3Q9Y4R7 772 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 IPPQ9Y573 584 aa6.32□□□□□ -1.4
TNFSF4-201ENST00000281834 SLC15A5A6NIM6 579 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms