RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 RGS16O15492 202 aaPredicted RBP18.81■□□□□ 0.6
CAPN1-201ENST00000279247 BANF1O75531 89 aa18.81■□□□□ 0.6
CAPN1-201ENST00000279247 GHRP10912 638 aa18.81■□□□□ 0.6
CAPN1-201ENST00000279247 MRPS6P82932 125 aaKnown RBP18.81■□□□□ 0.6
CAPN1-201ENST00000279247 ADGRF2Q8IZF7 708 aa18.81■□□□□ 0.6
CAPN1-201ENST00000279247 LRRC52Q8N7C0 313 aa18.81■□□□□ 0.6
CAPN1-201ENST00000279247 HASPINQ8TF76 798 aa18.81■□□□□ 0.6
CAPN1-201ENST00000279247 FAM172AQ8WUF8 416 aa18.81■□□□□ 0.6
CAPN1-201ENST00000279247 MTG1Q9BT17 334 aaPredicted RBP18.81■□□□□ 0.6
CAPN1-201ENST00000279247 MAK16Q9BXY0 300 aaKnown RBP18.81■□□□□ 0.6
CAPN1-201ENST00000279247 CTNNAL1Q9UBT7 734 aa18.81■□□□□ 0.6
CAPN1-201ENST00000279247 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.81■□□□□ 0.6
CAPN1-201ENST00000279247 CASTOR2A6NHX0 329 aa18.8■□□□□ 0.6
CAPN1-201ENST00000279247 C3orf70A6NLC5 250 aaPredicted RBP18.8■□□□□ 0.6
CAPN1-201ENST00000279247 C2CD4BA6NLJ0 364 aa18.8■□□□□ 0.6
CAPN1-201ENST00000279247 PTGESO14684 152 aa18.8■□□□□ 0.6
CAPN1-201ENST00000279247 TRUB2O95900 331 aaKnown RBP18.8■□□□□ 0.6
CAPN1-201ENST00000279247 GBP1P32455 592 aa18.8■□□□□ 0.6
CAPN1-201ENST00000279247 CCT5P48643 541 aa18.8■□□□□ 0.6
CAPN1-201ENST00000279247 ZNF143P52747 638 aaPredicted RBP18.8■□□□□ 0.6
CAPN1-201ENST00000279247 LILRA4P59901 499 aa18.8■□□□□ 0.6
CAPN1-201ENST00000279247 KRT81Q14533 505 aa18.8■□□□□ 0.6
CAPN1-201ENST00000279247 WSCD1Q658N2 575 aa18.8■□□□□ 0.6
CAPN1-201ENST00000279247 XPNPEP3Q9NQH7 507 aa18.8■□□□□ 0.6
CAPN1-201ENST00000279247 HEY1Q9Y5J3 304 aa18.8■□□□□ 0.6
CAPN1-201ENST00000279247 PIRO00625 290 aa18.8■□□□□ 0.6
CAPN1-201ENST00000279247 CD4P01730 458 aa18.8■□□□□ 0.6
CAPN1-201ENST00000279247 ASGR1P07306 291 aa18.8■□□□□ 0.6
CAPN1-201ENST00000279247 SP3Q02447 781 aa18.8■□□□□ 0.6
CAPN1-201ENST00000279247 KDM7AQ6ZMT4 941 aa18.8■□□□□ 0.6
CAPN1-201ENST00000279247 SLCO2A1Q92959 643 aa18.8■□□□□ 0.6
CAPN1-201ENST00000279247 AGO3Q9H9G7 860 aaKnown RBP18.8■□□□□ 0.6
CAPN1-201ENST00000279247 INPP5FQ9Y2H2 1132 aa18.8■□□□□ 0.6
CAPN1-201ENST00000279247 GRIN2DO15399 1336 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 AXLP30530 894 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 SDC4P31431 198 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 VCPP55072 806 aaKnown RBP18.79■□□□□ 0.6
CAPN1-201ENST00000279247 GAD2Q05329 585 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 CACNB2Q08289 660 aaPredicted RBP18.79■□□□□ 0.6
CAPN1-201ENST00000279247 CCDC14Q49A88 953 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 HOOK3Q86VS8 718 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 ZNF560Q96MR9 790 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 PAAF1Q9BRP4 392 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 CNPY3Q9BT09 278 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 GTF2IRD1Q9UHL9 959 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 NOD1Q9Y239 953 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 DERAQ9Y315 318 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 CYB561D2O14569 222 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 RASGRF2O14827 1237 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 PIAS1O75925 651 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 CYBAP13498 195 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 TKTP29401 623 aaKnown RBP18.79■□□□□ 0.6
CAPN1-201ENST00000279247 GABRB2P47870 512 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 OSTM1Q86WC4 334 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 NETO2Q8NC67 525 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.79■□□□□ 0.6
CAPN1-201ENST00000279247 RBM15Q96T37 977 aaKnown RBP eCLIP18.79■□□□□ 0.6
CAPN1-201ENST00000279247 EIF3HO15372 352 aaKnown RBP eCLIP18.79■□□□□ 0.6
CAPN1-201ENST00000279247 CHRNA1P02708 482 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 FASTKD3Q14CZ7 662 aaKnown RBP18.79■□□□□ 0.6
CAPN1-201ENST00000279247 KCNA10Q16322 511 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 CA9Q16790 459 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 TAF2Q6P1X5 1199 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 FAM71DQ8N9W8 422 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 FNIP1Q8TF40 1166 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 SLC35F5Q8WV83 523 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 RSAD2Q8WXG1 361 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 MED10Q9BTT4 135 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 SAYSD1Q9NPB0 183 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 MIOSQ9NXC5 875 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 KIAA1257Q9ULG3 409 aa18.79■□□□□ 0.6
CAPN1-201ENST00000279247 XPOTO43592 962 aaKnown RBP18.78■□□□□ 0.6
CAPN1-201ENST00000279247 STAU1O95793 577 aaKnown RBP18.78■□□□□ 0.6
CAPN1-201ENST00000279247 POMCP01189 267 aa18.78■□□□□ 0.6
CAPN1-201ENST00000279247 PRKAR2AP13861 404 aaKnown RBP18.78■□□□□ 0.6
CAPN1-201ENST00000279247 KLRC2P26717 231 aa18.78■□□□□ 0.6
CAPN1-201ENST00000279247 CD52P31358 61 aa18.78■□□□□ 0.6
CAPN1-201ENST00000279247 LSP1P33241 339 aa18.78■□□□□ 0.6
CAPN1-201ENST00000279247 SCNN1GP51170 649 aa18.78■□□□□ 0.6
CAPN1-201ENST00000279247 APLP1P51693 650 aa18.78■□□□□ 0.6
CAPN1-201ENST00000279247 RHBDF2Q6PJF5 856 aa18.78■□□□□ 0.6
CAPN1-201ENST00000279247 OLFML1Q6UWY5 402 aa18.78■□□□□ 0.6
CAPN1-201ENST00000279247 POLNQ7Z5Q5 900 aa18.78■□□□□ 0.6
CAPN1-201ENST00000279247 CTU1Q7Z7A3 348 aaKnown RBP18.78■□□□□ 0.6
CAPN1-201ENST00000279247 SPATA18Q8TC71 538 aa18.78■□□□□ 0.6
CAPN1-201ENST00000279247 FAM105AQ9NUU6 356 aa18.78■□□□□ 0.6
CAPN1-201ENST00000279247 NEU2Q9Y3R4 380 aa18.78■□□□□ 0.6
CAPN1-201ENST00000279247 LAMA3Q16787 3333 aa18.78■□□□□ 0.6
CAPN1-201ENST00000279247 E7EVH7 732 aa18.78■□□□□ 0.6
CAPN1-201ENST00000279247 EIF3BP55884 814 aaKnown RBP18.78■□□□□ 0.6
CAPN1-201ENST00000279247 PPP2R2AP63151 447 aa18.78■□□□□ 0.6
CAPN1-201ENST00000279247 SLC6A3Q01959 620 aa18.78■□□□□ 0.6
CAPN1-201ENST00000279247 UNC45BQ8IWX7 931 aa18.78■□□□□ 0.6
CAPN1-201ENST00000279247 ALLCQ8N6M5 410 aa18.78■□□□□ 0.6
CAPN1-201ENST00000279247 NDUFAB1O14561 156 aa18.77■□□□□ 0.6
CAPN1-201ENST00000279247 BEST1O76090 585 aa18.77■□□□□ 0.6
CAPN1-201ENST00000279247 MDH1P40925 334 aaKnown RBP18.77■□□□□ 0.6
CAPN1-201ENST00000279247 CLCNKBP51801 687 aa18.77■□□□□ 0.6
CAPN1-201ENST00000279247 EIF3EP60228 445 aaKnown RBP18.77■□□□□ 0.6
CAPN1-201ENST00000279247 SYDE1Q6ZW31 735 aaPredicted RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms