RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ALKBH8Q96BT7 664 aaKnown RBP13.53□□□□□ -0.24
C9orf3-201ENST00000277198 RMDN2Q96LZ7 410 aa13.53□□□□□ -0.24
C9orf3-201ENST00000277198 ANKRD27Q96NW4 1050 aa13.53□□□□□ -0.24
C9orf3-201ENST00000277198 TMEM237Q96Q45 408 aa13.53□□□□□ -0.24
C9orf3-201ENST00000277198 CISHQ9NSE2 258 aa13.53□□□□□ -0.24
C9orf3-201ENST00000277198 WDR35Q9P2L0 1181 aa13.53□□□□□ -0.24
C9orf3-201ENST00000277198 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.53□□□□□ -0.24
C9orf3-201ENST00000277198 SIP14410 1827 aa13.53□□□□□ -0.24
C9orf3-201ENST00000277198 RBM47A0AV96 593 aaKnown RBP13.52□□□□□ -0.24
C9orf3-201ENST00000277198 SIGLEC16A6NMB1 481 aa13.52□□□□□ -0.24
C9orf3-201ENST00000277198 OGTO15294 1046 aa13.52□□□□□ -0.24
C9orf3-201ENST00000277198 TYROBPO43914 113 aa13.52□□□□□ -0.24
C9orf3-201ENST00000277198 PQBP1O60828 265 aaKnown RBP13.52□□□□□ -0.24
C9orf3-201ENST00000277198 EDF1O60869 148 aaKnown RBP13.52□□□□□ -0.24
C9orf3-201ENST00000277198 CST3P01034 146 aaPredicted RBP13.52□□□□□ -0.24
C9orf3-201ENST00000277198 WEE2P0C1S8 567 aa13.52□□□□□ -0.24
C9orf3-201ENST00000277198 MAGEA10P43363 369 aaPredicted RBP13.52□□□□□ -0.24
C9orf3-201ENST00000277198 RASSF2P50749 326 aa13.52□□□□□ -0.24
C9orf3-201ENST00000277198 ATP11AP98196 1134 aa13.52□□□□□ -0.24
C9orf3-201ENST00000277198 MGAT5Q09328 741 aa13.52□□□□□ -0.24
C9orf3-201ENST00000277198 CAPSQ13938 189 aa13.52□□□□□ -0.24
C9orf3-201ENST00000277198 ACAP1Q15027 740 aa13.52□□□□□ -0.24
C9orf3-201ENST00000277198 FSCN1Q16658 493 aaKnown RBP13.52□□□□□ -0.24
C9orf3-201ENST00000277198 HADHQ16836 314 aaKnown RBP13.52□□□□□ -0.24
C9orf3-201ENST00000277198 LY6KQ17RY6 165 aa13.52□□□□□ -0.24
C9orf3-201ENST00000277198 KLHL38Q2WGJ6 581 aa13.52□□□□□ -0.24
C9orf3-201ENST00000277198 TLDC1Q6P9B6 456 aa13.52□□□□□ -0.24
C9orf3-201ENST00000277198 ZBED8Q8IZ13 594 aa13.52□□□□□ -0.24
C9orf3-201ENST00000277198 ATP11CQ8NB49 1132 aa13.52□□□□□ -0.24
C9orf3-201ENST00000277198 GLIS1Q8NBF1 620 aa13.52□□□□□ -0.24
C9orf3-201ENST00000277198 INPP5DQ92835 1189 aa13.52□□□□□ -0.24
C9orf3-201ENST00000277198 FAM167AQ96KS9 214 aa13.52□□□□□ -0.24
C9orf3-201ENST00000277198 VPS37BQ9H9H4 285 aa13.52□□□□□ -0.24
C9orf3-201ENST00000277198 PRDM5Q9NQX1 630 aaPredicted RBP13.52□□□□□ -0.24
C9orf3-201ENST00000277198 NOP53Q9NZM5 478 aaKnown RBP13.52□□□□□ -0.24
C9orf3-201ENST00000277198 PHTF1Q9UMS5 762 aa13.52□□□□□ -0.24
C9orf3-201ENST00000277198 LRRD1A4D1F6 860 aa13.52□□□□□ -0.25
C9orf3-201ENST00000277198 FOXO6A8MYZ6 492 aa13.52□□□□□ -0.25
C9orf3-201ENST00000277198 E7ESA3 106 aa13.52□□□□□ -0.25
C9orf3-201ENST00000277198 SGK1O00141 431 aa13.52□□□□□ -0.25
C9orf3-201ENST00000277198 MED7O43513 233 aa13.52□□□□□ -0.25
C9orf3-201ENST00000277198 HNRNPCL1O60812 293 aaKnown RBP13.52□□□□□ -0.25
C9orf3-201ENST00000277198 TGFB3P10600 412 aa13.52□□□□□ -0.25
C9orf3-201ENST00000277198 ITGB8P26012 769 aa13.52□□□□□ -0.25
C9orf3-201ENST00000277198 ARL4CP56559 192 aa13.52□□□□□ -0.25
C9orf3-201ENST00000277198 OGDHQ02218 1023 aa13.52□□□□□ -0.25
C9orf3-201ENST00000277198 SF3A3Q12874 501 aaKnown RBP eCLIP13.52□□□□□ -0.25
C9orf3-201ENST00000277198 CBLBQ13191 982 aa13.52□□□□□ -0.25
C9orf3-201ENST00000277198 MXD4Q14582 209 aaPredicted RBP13.52□□□□□ -0.25
C9orf3-201ENST00000277198 E2F5Q15329 346 aa13.52□□□□□ -0.25
C9orf3-201ENST00000277198 HABP4Q5JVS0 413 aaKnown RBP13.52□□□□□ -0.25
C9orf3-201ENST00000277198 IER5Q5VY09 327 aa13.52□□□□□ -0.25
C9orf3-201ENST00000277198 CDCA2Q69YH5 1023 aaPredicted RBP13.52□□□□□ -0.25
C9orf3-201ENST00000277198 BBS12Q6ZW61 710 aa13.52□□□□□ -0.25
C9orf3-201ENST00000277198 WDTC1Q8N5D0 677 aa13.52□□□□□ -0.25
C9orf3-201ENST00000277198 LRRC8CQ8TDW0 803 aa13.52□□□□□ -0.25
C9orf3-201ENST00000277198 RSRC1Q96IZ7 334 aaKnown RBP13.52□□□□□ -0.25
C9orf3-201ENST00000277198 LRRC37BQ96QE4 947 aa13.52□□□□□ -0.25
C9orf3-201ENST00000277198 DHRS4Q9BTZ2 278 aa13.52□□□□□ -0.25
C9orf3-201ENST00000277198 LRMDAQ9H2I8 198 aa13.52□□□□□ -0.25
C9orf3-201ENST00000277198 STARD7Q9NQZ5 370 aa13.52□□□□□ -0.25
C9orf3-201ENST00000277198 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.52□□□□□ -0.25
C9orf3-201ENST00000277198 WDR81Q562E7 1941 aa13.52□□□□□ -0.25
C9orf3-201ENST00000277198 TRIM43BA6NCK2 446 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 C3orf70A6NLC5 250 aaPredicted RBP13.51□□□□□ -0.25
C9orf3-201ENST00000277198 POC1B-GALNT4F8VUJ3 575 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 ZSCAN5DPP0CG00 497 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 TCF4P15884 667 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 SLC8A3P57103 927 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 NKX3-2P78367 333 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 PLCB3Q01970 1234 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 PDIA2Q13087 525 aaKnown RBP13.51□□□□□ -0.25
C9orf3-201ENST00000277198 TRPC3Q13507 836 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 CCDC62Q6P9F0 684 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 ADGRD1Q6QNK2 874 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 PRUNE1Q86TP1 453 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 AGGF1Q8N302 714 aaeCLIP13.51□□□□□ -0.25
C9orf3-201ENST00000277198 OR6J1Q8NGC5 347 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 TRIM43Q96BQ3 446 aaPredicted RBP13.51□□□□□ -0.25
C9orf3-201ENST00000277198 TSEN34Q9BSV6 310 aaKnown RBP13.51□□□□□ -0.25
C9orf3-201ENST00000277198 C2orf40Q9H1Z8 148 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 SPC25Q9HBM1 224 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 KLHL11Q9NVR0 708 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 GGT7Q9UJ14 662 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 CPSF3Q9UKF6 684 aaKnown RBP13.51□□□□□ -0.25
C9orf3-201ENST00000277198 RPL26L1Q9UNX3 145 aaKnown RBP13.51□□□□□ -0.25
C9orf3-201ENST00000277198 MOXD2PA6NHM9 499 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 TM9SF1O15321 606 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 B4GALT4O60513 344 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 KRT16P08779 473 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 TXNP10599 105 aaKnown RBP13.51□□□□□ -0.25
C9orf3-201ENST00000277198 CA4P22748 312 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 BRD2P25440 801 aaKnown RBP13.51□□□□□ -0.25
C9orf3-201ENST00000277198 GBP2P32456 591 aaPredicted RBP13.51□□□□□ -0.25
C9orf3-201ENST00000277198 STAT5BP51692 787 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 CCNG1P51959 295 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 MYL6P60660 151 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 SLC25A11Q02978 314 aaKnown RBP13.51□□□□□ -0.25
C9orf3-201ENST00000277198 NAT8LQ8N9F0 302 aa13.51□□□□□ -0.25
C9orf3-201ENST00000277198 AGAP11Q8TF27 550 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms