RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 EBF3Q9H4W6 596 aa15.33■□□□□ 0.04
HMGN3-201ENST00000275036 C8orf33Q9H7E9 229 aaPredicted RBP15.33■□□□□ 0.04
HMGN3-201ENST00000275036 HOOK1Q9UJC3 728 aaKnown RBP15.33■□□□□ 0.04
HMGN3-201ENST00000275036 DNAH14Q0VDD8 3507 aa15.33■□□□□ 0.04
HMGN3-201ENST00000275036 PPP1R3GB7ZBB8 358 aa15.32■□□□□ 0.04
HMGN3-201ENST00000275036 TNFRSF10BO14763 440 aa15.32■□□□□ 0.04
HMGN3-201ENST00000275036 SLC16A3O15427 465 aaKnown RBP15.32■□□□□ 0.04
HMGN3-201ENST00000275036 LILRB5O75023 590 aa15.32■□□□□ 0.04
HMGN3-201ENST00000275036 BEST1O76090 585 aa15.32■□□□□ 0.04
HMGN3-201ENST00000275036 GTF2H1P32780 548 aa15.32■□□□□ 0.04
HMGN3-201ENST00000275036 MXI1P50539 228 aa15.32■□□□□ 0.04
HMGN3-201ENST00000275036 FKBP3Q00688 224 aaKnown RBP15.32■□□□□ 0.04
HMGN3-201ENST00000275036 LRRC63Q05C16 580 aa15.32■□□□□ 0.04
HMGN3-201ENST00000275036 DMWDQ09019 674 aa15.32■□□□□ 0.04
HMGN3-201ENST00000275036 IFRD2Q12894 506 aaPredicted RBP15.32■□□□□ 0.04
HMGN3-201ENST00000275036 CCINQ13939 588 aa15.32■□□□□ 0.04
HMGN3-201ENST00000275036 MORC3Q14149 939 aa15.32■□□□□ 0.04
HMGN3-201ENST00000275036 ITPRIPL2Q3MIP1 535 aa15.32■□□□□ 0.04
HMGN3-201ENST00000275036 CBWD6Q4V339 395 aa15.32■□□□□ 0.04
HMGN3-201ENST00000275036 CBWD3Q5JTY5 395 aa15.32■□□□□ 0.04
HMGN3-201ENST00000275036 CBWD5Q5RIA9 395 aa15.32■□□□□ 0.04
HMGN3-201ENST00000275036 ZC3H14Q6PJT7 736 aaKnown RBP15.32■□□□□ 0.04
HMGN3-201ENST00000275036 UNC93AQ86WB7 457 aa15.32■□□□□ 0.04
HMGN3-201ENST00000275036 WHAMMQ8TF30 809 aa15.32■□□□□ 0.04
HMGN3-201ENST00000275036 TSG101Q99816 390 aa15.32■□□□□ 0.04
HMGN3-201ENST00000275036 DUSP9Q99956 384 aaKnown RBP15.32■□□□□ 0.04
HMGN3-201ENST00000275036 MED10Q9BTT4 135 aa15.32■□□□□ 0.04
HMGN3-201ENST00000275036 NIF3L1Q9GZT8 377 aa15.32■□□□□ 0.04
HMGN3-201ENST00000275036 SEMA4AQ9H3S1 761 aa15.32■□□□□ 0.04
HMGN3-201ENST00000275036 KIF9Q9HAQ2 790 aa15.32■□□□□ 0.04
HMGN3-201ENST00000275036 FAM49BQ9NUQ9 324 aa15.32■□□□□ 0.04
HMGN3-201ENST00000275036 CHMP5Q9NZZ3 219 aa15.32■□□□□ 0.04
HMGN3-201ENST00000275036 SPTBN4Q9H254 2564 aa15.32■□□□□ 0.04
HMGN3-201ENST00000275036 TRAV19A0A0A6YYK7 116 aa15.31■□□□□ 0.04
HMGN3-201ENST00000275036 ZNF840PA6NDX5 716 aa15.31■□□□□ 0.04
HMGN3-201ENST00000275036 BIN1O00499 593 aa15.31■□□□□ 0.04
HMGN3-201ENST00000275036 AP1G2O75843 785 aa15.31■□□□□ 0.04
HMGN3-201ENST00000275036 CKMP06732 381 aa15.31■□□□□ 0.04
HMGN3-201ENST00000275036 USP17L7P0C7H9 530 aa15.31■□□□□ 0.04
HMGN3-201ENST00000275036 CD58P19256 250 aa15.31■□□□□ 0.04
HMGN3-201ENST00000275036 TAF10Q12962 218 aa15.31■□□□□ 0.04
HMGN3-201ENST00000275036 RUNX3Q13761 415 aa15.31■□□□□ 0.04
HMGN3-201ENST00000275036 MTF1Q14872 753 aa15.31■□□□□ 0.04
HMGN3-201ENST00000275036 DCAF17Q5H9S7 520 aaPredicted RBP15.31■□□□□ 0.04
HMGN3-201ENST00000275036 PKN3Q6P5Z2 889 aa15.31■□□□□ 0.04
HMGN3-201ENST00000275036 MAMSTRQ6ZN01 415 aa15.31■□□□□ 0.04
HMGN3-201ENST00000275036 DCLK2Q8N568 766 aa15.31■□□□□ 0.04
HMGN3-201ENST00000275036 FBXL13Q8NEE6 735 aa15.31■□□□□ 0.04
HMGN3-201ENST00000275036 SCAMP5Q8TAC9 235 aa15.31■□□□□ 0.04
HMGN3-201ENST00000275036 SLC2A14Q8TDB8 520 aa15.31■□□□□ 0.04
HMGN3-201ENST00000275036 SMARCD1Q96GM5 515 aa15.31■□□□□ 0.04
HMGN3-201ENST00000275036 SMOQ99835 787 aa15.31■□□□□ 0.04
HMGN3-201ENST00000275036 IMPG2Q9BZV3 1241 aa15.31■□□□□ 0.04
HMGN3-201ENST00000275036 CYP3A43Q9HB55 503 aa15.31■□□□□ 0.04
HMGN3-201ENST00000275036 FBRSL1Q9HCM7 1045 aaKnown RBP15.31■□□□□ 0.04
HMGN3-201ENST00000275036 KRT82Q9NSB4 513 aa15.31■□□□□ 0.04
HMGN3-201ENST00000275036 THG1LQ9NWX6 298 aaKnown RBP15.31■□□□□ 0.04
HMGN3-201ENST00000275036 ZSCAN32Q9NX65 697 aa15.31■□□□□ 0.04
HMGN3-201ENST00000275036 TRPM5Q9NZQ8 1165 aa15.31■□□□□ 0.04
HMGN3-201ENST00000275036 PCDHGA2Q9Y5H1 932 aa15.31■□□□□ 0.04
HMGN3-201ENST00000275036 WNT6Q9Y6F9 365 aa15.31■□□□□ 0.04
HMGN3-201ENST00000275036 K7ESF4 209 aa15.3■□□□□ 0.04
HMGN3-201ENST00000275036 PSMA7O14818 248 aa15.3■□□□□ 0.04
HMGN3-201ENST00000275036 ATP8B3O60423 1300 aa15.3■□□□□ 0.04
HMGN3-201ENST00000275036 CILPO75339 1184 aa15.3■□□□□ 0.04
HMGN3-201ENST00000275036 HDCP19113 662 aa15.3■□□□□ 0.04
HMGN3-201ENST00000275036 SLC5A3P53794 718 aa15.3■□□□□ 0.04
HMGN3-201ENST00000275036 TCERG1LQ5VWI1 586 aa15.3■□□□□ 0.04
HMGN3-201ENST00000275036 KLHL10Q6JEL2 608 aa15.3■□□□□ 0.04
HMGN3-201ENST00000275036 FSTL4Q6MZW2 842 aa15.3■□□□□ 0.04
HMGN3-201ENST00000275036 TTI2Q6NXR4 508 aa15.3■□□□□ 0.04
HMGN3-201ENST00000275036 KIAA1549LQ6ZVL6 1849 aa15.3■□□□□ 0.04
HMGN3-201ENST00000275036 NUP93Q8N1F7 819 aa15.3■□□□□ 0.04
HMGN3-201ENST00000275036 TTC16Q8NEE8 873 aa15.3■□□□□ 0.04
HMGN3-201ENST00000275036 TATDN2Q93075 761 aa15.3■□□□□ 0.04
HMGN3-201ENST00000275036 SLC35C1Q96A29 364 aa15.3■□□□□ 0.04
HMGN3-201ENST00000275036 DHTKD1Q96HY7 919 aaPredicted RBP15.3■□□□□ 0.04
HMGN3-201ENST00000275036 ARID3AQ99856 593 aa15.3■□□□□ 0.04
HMGN3-201ENST00000275036 IER2Q9BTL4 223 aa15.3■□□□□ 0.04
HMGN3-201ENST00000275036 GTPBP4Q9BZE4 634 aaKnown RBP15.3■□□□□ 0.04
HMGN3-201ENST00000275036 RNF38Q9H0F5 515 aa15.3■□□□□ 0.04
HMGN3-201ENST00000275036 CSNK1G1Q9HCP0 422 aa15.3■□□□□ 0.04
HMGN3-201ENST00000275036 DMAP1Q9NPF5 467 aaPredicted RBP15.3■□□□□ 0.04
HMGN3-201ENST00000275036 RAB20Q9NX57 234 aa15.3■□□□□ 0.04
HMGN3-201ENST00000275036 IL37Q9NZH6 218 aa15.3■□□□□ 0.04
HMGN3-201ENST00000275036 DMXL1Q9Y485 3027 aa15.3■□□□□ 0.04
HMGN3-201ENST00000275036 OLFM2O95897 454 aa15.29■□□□□ 0.04
HMGN3-201ENST00000275036 OAS1P00973 400 aaKnown RBP15.29■□□□□ 0.04
HMGN3-201ENST00000275036 YWHAQP27348 245 aa15.29■□□□□ 0.04
HMGN3-201ENST00000275036 ADORA2BP29275 332 aa15.29■□□□□ 0.04
HMGN3-201ENST00000275036 CCR3P51677 355 aa15.29■□□□□ 0.04
HMGN3-201ENST00000275036 MAP3K7CLP57077 242 aa15.29■□□□□ 0.04
HMGN3-201ENST00000275036 UBE2HP62256 183 aa15.29■□□□□ 0.04
HMGN3-201ENST00000275036 STIM1Q13586 685 aa15.29■□□□□ 0.04
HMGN3-201ENST00000275036 LRRC32Q14392 662 aa15.29■□□□□ 0.04
HMGN3-201ENST00000275036 C1orf228Q6PIY5 440 aa15.29■□□□□ 0.04
HMGN3-201ENST00000275036 SPEM1Q8N4L4 309 aa15.29■□□□□ 0.04
HMGN3-201ENST00000275036 SH3RF2Q8TEC5 729 aa15.29■□□□□ 0.04
HMGN3-201ENST00000275036 OSCP1Q8WVF1 389 aa15.29■□□□□ 0.04
HMGN3-201ENST00000275036 NELFBQ8WX92 580 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms