RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 ST7Q9NRC1 585 aa16.14■□□□□ 0.17
COPS3-201ENST00000268717 TMEM161AQ9NX61 479 aa16.14■□□□□ 0.17
COPS3-201ENST00000268717 PCYOX1Q9UHG3 505 aa16.14■□□□□ 0.17
COPS3-201ENST00000268717 CDH9Q9ULB4 789 aa16.14■□□□□ 0.17
COPS3-201ENST00000268717 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.13■□□□□ 0.17
COPS3-201ENST00000268717 FAM187AA6NFU0 413 aa16.13■□□□□ 0.17
COPS3-201ENST00000268717 CASTOR2A6NHX0 329 aa16.13■□□□□ 0.17
COPS3-201ENST00000268717 F8VP50 259 aa16.13■□□□□ 0.17
COPS3-201ENST00000268717 TMEM189-UBE2V1I3L0A0 370 aa16.13■□□□□ 0.17
COPS3-201ENST00000268717 DPYSL4O14531 572 aa16.13■□□□□ 0.17
COPS3-201ENST00000268717 TLL1O43897 1013 aa16.13■□□□□ 0.17
COPS3-201ENST00000268717 GJB5O95377 273 aa16.13■□□□□ 0.17
COPS3-201ENST00000268717 AMHP03971 560 aa16.13■□□□□ 0.17
COPS3-201ENST00000268717 CA3P07451 260 aa16.13■□□□□ 0.17
COPS3-201ENST00000268717 KRT7P08729 469 aa16.13■□□□□ 0.17
COPS3-201ENST00000268717 PTPN1P18031 435 aaKnown RBP16.13■□□□□ 0.17
COPS3-201ENST00000268717 PCSK1P29120 753 aa16.13■□□□□ 0.17
COPS3-201ENST00000268717 ZNF143P52747 638 aaPredicted RBP16.13■□□□□ 0.17
COPS3-201ENST00000268717 HADHQ16836 314 aaKnown RBP16.13■□□□□ 0.17
COPS3-201ENST00000268717 PPP2R2DQ66LE6 453 aa16.13■□□□□ 0.17
COPS3-201ENST00000268717 FAM183BPQ6ZVS7 135 aa16.13■□□□□ 0.17
COPS3-201ENST00000268717 PRELID2Q8N945 189 aa16.13■□□□□ 0.17
COPS3-201ENST00000268717 JOSD2Q8TAC2 188 aa16.13■□□□□ 0.17
COPS3-201ENST00000268717 URGCPQ8TCY9 931 aa16.13■□□□□ 0.17
COPS3-201ENST00000268717 SLC2A14Q8TDB8 520 aa16.13■□□□□ 0.17
COPS3-201ENST00000268717 SEC14L1Q92503 715 aa16.13■□□□□ 0.17
COPS3-201ENST00000268717 CNPY3Q9BT09 278 aa16.13■□□□□ 0.17
COPS3-201ENST00000268717 DDX47Q9H0S4 455 aaKnown RBP16.13■□□□□ 0.17
COPS3-201ENST00000268717 HOMER3Q9NSC5 361 aa16.13■□□□□ 0.17
COPS3-201ENST00000268717 ASNSD1Q9NWL6 643 aa16.13■□□□□ 0.17
COPS3-201ENST00000268717 C2CD4BA6NLJ0 364 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 POMCP01189 267 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 GLI1P08151 1106 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 CCDC130P13994 396 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 SLC6A3Q01959 620 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 DSC1Q08554 894 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 NNTQ13423 1086 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 CUL1Q13616 776 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 SIX1Q15475 284 aaPredicted RBP16.12■□□□□ 0.17
COPS3-201ENST00000268717 OR6B2Q6IFH4 312 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 EMBQ6PCB8 327 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 DUSP16Q9BY84 665 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 LRRC19Q9H756 370 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 DDX43Q9NXZ2 648 aaKnown RBP16.12■□□□□ 0.17
COPS3-201ENST00000268717 CACNG4Q9UBN1 327 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 USTQ9Y2C2 406 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 TRANK1O15050 2925 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 LRCH4O75427 683 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 B3GAT3O94766 335 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 NPR3P17342 541 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 DESP17661 470 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 TYMPP19971 482 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 GPD1P21695 349 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 SLC7A5Q01650 507 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 SLC25A11Q02978 314 aaKnown RBP16.12■□□□□ 0.17
COPS3-201ENST00000268717 KLF1Q13351 362 aaPredicted RBP16.12■□□□□ 0.17
COPS3-201ENST00000268717 TIGD5Q53EQ6 642 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 NOMO2Q5JPE7 1267 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 AADACL2Q6P093 401 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 SLC26A9Q7LBE3 791 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 HDXQ7Z353 690 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 METTL23Q86XA0 190 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 FUKQ8N0W3 1084 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 AENQ8WTP8 325 aaKnown RBP16.12■□□□□ 0.17
COPS3-201ENST00000268717 MYLIPQ8WY64 445 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 KCTD13Q8WZ19 329 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 SLCO2A1Q92959 643 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 SUSD3Q96L08 255 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 SYT15Q9BQS2 421 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 ZBED2Q9BTP6 218 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 FUT8Q9BYC5 575 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 RAB17Q9H0T7 212 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 EFR3BQ9Y2G0 817 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 NR2E1Q9Y466 385 aa16.12■□□□□ 0.17
COPS3-201ENST00000268717 TULP2O00295 520 aa16.11■□□□□ 0.17
COPS3-201ENST00000268717 MAP2K7O14733 419 aa16.11■□□□□ 0.17
COPS3-201ENST00000268717 PAPSS1O43252 624 aaPredicted RBP16.11■□□□□ 0.17
COPS3-201ENST00000268717 HCRTO43612 131 aa16.11■□□□□ 0.17
COPS3-201ENST00000268717 RNF8O76064 485 aa16.11■□□□□ 0.17
COPS3-201ENST00000268717 SEC31AO94979 1220 aaKnown RBP16.11■□□□□ 0.17
COPS3-201ENST00000268717 ADORA2BP29275 332 aa16.11■□□□□ 0.17
COPS3-201ENST00000268717 GUCY2DQ02846 1103 aa16.11■□□□□ 0.17
COPS3-201ENST00000268717 FAM117BQ6P1L5 589 aa16.11■□□□□ 0.17
COPS3-201ENST00000268717 CD300LGQ6UXG3 332 aa16.11■□□□□ 0.17
COPS3-201ENST00000268717 TOP1MTQ969P6 601 aa16.11■□□□□ 0.17
COPS3-201ENST00000268717 RAD9AQ99638 391 aa16.11■□□□□ 0.17
COPS3-201ENST00000268717 ACBD6Q9BR61 282 aa16.11■□□□□ 0.17
COPS3-201ENST00000268717 PAAF1Q9BRP4 392 aa16.11■□□□□ 0.17
COPS3-201ENST00000268717 OSBPL8Q9BZF1 889 aa16.11■□□□□ 0.17
COPS3-201ENST00000268717 UBXN6Q9BZV1 441 aa16.11■□□□□ 0.17
COPS3-201ENST00000268717 EPB41L5Q9HCM4 733 aa16.11■□□□□ 0.17
COPS3-201ENST00000268717 FAM53CQ9NYF3 392 aa16.11■□□□□ 0.17
COPS3-201ENST00000268717 AMACRQ9UHK6 382 aa16.11■□□□□ 0.17
COPS3-201ENST00000268717 RASAL2Q9UJF2 1139 aa16.11■□□□□ 0.17
COPS3-201ENST00000268717 INPP5FQ9Y2H2 1132 aa16.11■□□□□ 0.17
COPS3-201ENST00000268717 TDRD15B5MCY1 1934 aaKnown RBP16.1■□□□□ 0.17
COPS3-201ENST00000268717 HOXA2O43364 376 aa16.1■□□□□ 0.17
COPS3-201ENST00000268717 ARHGEF15O94989 841 aa16.1■□□□□ 0.17
COPS3-201ENST00000268717 RARAP10276 462 aa16.1■□□□□ 0.17
COPS3-201ENST00000268717 IBSPP21815 317 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms