RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 CYP2A13Q16696 494 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 ABCB5Q2M3G0 1257 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 PPP6R3Q5H9R7 873 aaPredicted RBP9.14□□□□□ -0.95
VAPB-201ENST00000265619 STARD8Q92502 1023 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 TTC17Q96AE7 1141 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 GPATCH1Q9BRR8 931 aaKnown RBP9.14□□□□□ -0.95
VAPB-201ENST00000265619 MRPS26Q9BYN8 205 aaKnown RBP9.14□□□□□ -0.95
VAPB-201ENST00000265619 FHDC1Q9C0D6 1143 aaPredicted RBP9.14□□□□□ -0.95
VAPB-201ENST00000265619 VPS37BQ9H9H4 285 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 STK17AQ9UEE5 414 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 ARAP2Q8WZ64 1704 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 POTEB3A0JP26 581 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 RSPH10B2B2RC85 870 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 POTECB2RU33 542 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 ZMPSTE24O75844 475 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 RSPH10BP0C881 870 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 POLR2MP0CAP2 368 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 TRIM49P0CI25 452 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 TRIM49CP0CI26 452 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 SRGAP2CP0DJJ0 459 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 SRGAP2BP0DMP2 458 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 LMNB1P20700 586 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 ADSSP30520 456 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 MSX2P35548 267 aaPredicted RBP9.14□□□□□ -0.95
VAPB-201ENST00000265619 ECE1P42892 770 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 CDH15P55291 814 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 KRT81Q14533 505 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 ZNF423Q2M1K9 1284 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 EFHC1Q5JVL4 640 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 RABGAP1LQ5R372 815 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 DCLRE1AQ6PJP8 1040 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 POTEBQ6S5H4 581 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 Q8N9G6 341 aaPredicted RBP9.14□□□□□ -0.95
VAPB-201ENST00000265619 ICA1LQ8NDH6 482 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 ATP2A3Q93084 1043 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 MAELQ96JY0 434 aaKnown RBP9.14□□□□□ -0.95
VAPB-201ENST00000265619 CCDC106Q9BWC9 280 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 OSBPL6Q9BZF3 934 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 DRC3Q9H069 523 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 PAIP1Q9H074 479 aaKnown RBP9.14□□□□□ -0.95
VAPB-201ENST00000265619 PLGRKTQ9HBL7 147 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 HOMER2Q9NSB8 354 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 UTP6Q9NYH9 597 aaKnown RBP9.14□□□□□ -0.95
VAPB-201ENST00000265619 DNAJB4Q9UDY4 337 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 MTUS1Q9ULD2 1270 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 SMG5Q9UPR3 1016 aaKnown RBP9.14□□□□□ -0.95
VAPB-201ENST00000265619 GIT1Q9Y2X7 761 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 AP4B1Q9Y6B7 739 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 CCDC195A0A1B0GUA6 201 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 MATN2O00339 956 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 SORBS3O60504 671 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 STIP1P31948 543 aaKnown RBP9.14□□□□□ -0.95
VAPB-201ENST00000265619 SHMT1P34896 483 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 GRM5P41594 1212 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 GPX6P59796 221 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 COG2Q14746 738 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 ERI1Q8IV48 349 aaKnown RBP9.14□□□□□ -0.95
VAPB-201ENST00000265619 RTKN2Q8IZC4 609 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 NEDD1Q8NHV4 660 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 FAM111AQ96PZ2 611 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 OSBPL10Q9BXB5 764 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 MTMR4Q9NYA4 1195 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 RSL24D1Q9UHA3 163 aaKnown RBP9.14□□□□□ -0.95
VAPB-201ENST00000265619 DTNAQ9Y4J8 743 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 CORINQ9Y5Q5 1042 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 GPC6Q9Y625 555 aaPredicted RBP9.14□□□□□ -0.95
VAPB-201ENST00000265619 MAST2Q6P0Q8 1798 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 ADAMTSL1Q8N6G6 1762 aa9.14□□□□□ -0.95
VAPB-201ENST00000265619 CBFA2T3O75081 653 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 ZBTB11O95625 1053 aaPredicted RBP9.13□□□□□ -0.95
VAPB-201ENST00000265619 HSPA6P17066 643 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 ALDH1A3P47895 512 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 NDST2P52849 883 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 C11orf63Q6NUN7 778 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 RSBN1LQ6PCB5 846 aaPredicted RBP9.13□□□□□ -0.95
VAPB-201ENST00000265619 CDHR3Q6ZTQ4 885 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 DENND5BQ6ZUT9 1274 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 SH3BP5LQ7L8J4 393 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 ADGRG6Q86SQ4 1221 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 DAGLBQ8NCG7 672 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 MZB1Q8WU39 189 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 KAT5Q92993 513 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 CEP295NLQ96MC4 621 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 DCLK3Q9C098 648 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 SH3GLB2Q9NR46 395 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 PI4KBQ9UBF8 816 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 MTO1Q9Y2Z2 717 aaKnown RBP9.13□□□□□ -0.95
VAPB-201ENST00000265619 ZNFX1Q9P2E3 1918 aaKnown RBP9.13□□□□□ -0.95
VAPB-201ENST00000265619 ASTN1O14525 1302 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 GAKO14976 1311 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 TBC1D12O60347 775 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 SSTR1P30872 391 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 YWHAGP61981 247 aaKnown RBP eCLIP9.13□□□□□ -0.95
VAPB-201ENST00000265619 PSMC6P62333 389 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 OASLQ15646 514 aaKnown RBP9.13□□□□□ -0.95
VAPB-201ENST00000265619 ADRM1Q16186 407 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 C2CD6Q53TS8 623 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 DEPDC1Q5TB30 811 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 SLFN13Q68D06 897 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 CIAPIN1Q6FI81 312 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms