RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 POLNQ7Z5Q5 900 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 ARPINQ7Z6K5 226 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 FITM2Q8N6M3 262 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 OSCP1Q8WVF1 389 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 GANQ9H2C0 597 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 RPF1Q9H9Y2 349 aaKnown RBP12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 TUBGCP4Q9UGJ1 667 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 G3BP2Q9UN86 482 aaKnown RBP12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 ANKRD6Q9Y2G4 727 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 SLC22A2O15244 555 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 NR2C2P49116 596 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 IRF2BP1Q8IU81 584 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 ENDOVQ8N8Q3 282 aaKnown RBP12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 PIK3R5Q8WYR1 880 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 FAM84BQ96KN1 310 aaPredicted RBP12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 ZNF317Q96PQ6 595 aaPredicted RBP12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 NIF3L1Q9GZT8 377 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 RIOX1Q9H6W3 641 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 TMEM59LQ9UK28 342 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 ADGRA2Q96PE1 1338 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 DPPA5A6NC42 116 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 GSNP06396 782 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 ASNSP08243 561 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 ANPEPP15144 967 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 GARTP22102 1010 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 RBBP8Q99708 897 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 TRMUO75648 421 aaKnown RBP12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 VCAM1P19320 739 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 CATSPER3Q86XQ3 398 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 ZNF786Q8N393 782 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 ETNPPLQ8TBG4 499 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 NCLNQ969V3 563 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 APOL4Q9BPW4 351 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 SCN3BQ9NY72 215 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 AGO2Q9UKV8 859 aaKnown RBP12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 PEAK1Q9H792 1746 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 EIF2B2P49770 351 aaKnown RBP12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 RIPOR1Q6ZS17 1223 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 ANKMY2Q8IV38 441 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 LARGE2Q8N3Y3 721 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 GALNT4Q8N4A0 578 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 RMDN1Q96DB5 314 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 ALG13Q9NP73 1137 aaKnown RBP12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 FEM1BQ9UK73 627 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 CLK1P49759 484 aaKnown RBP12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 FASTKD1Q53R41 847 aaKnown RBP12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 PACS1Q6VY07 963 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 TAB3Q8N5C8 712 aaPredicted RBP12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 TMA16Q96EY4 203 aaKnown RBP12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 NUDT12Q9BQG2 462 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 PLEKHA5Q9HAU0 1116 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 URB1O60287 2271 aaKnown RBP12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 SUPT3HO75486 399 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 RIPPLY1Q0D2K3 151 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 EFHC2Q5JST6 749 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 ARMC3Q5W041 872 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 TMEM79Q9BSE2 394 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 EXTL3O43909 919 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 POLR2EP19388 210 aaKnown RBP12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 CDH3P22223 829 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 GIT2Q14161 759 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 AP3M1Q9Y2T2 418 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 NCAM2O15394 837 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 SLFN11Q7Z7L1 901 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 ADCY4Q8NFM4 1077 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 SH3GL1Q99961 368 aa12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 CAB39Q9Y376 341 aaPredicted RBP12.1□□□□□ -0.47
DNMT3A-201ENST00000264709 CST8O60676 142 aa12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 PYGMP11217 842 aa12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 SREBF1P36956 1147 aa12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 C16orf72Q14CZ0 275 aa12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 MYLK4Q86YV6 388 aaPredicted RBP12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 MINDY2Q8NBR6 621 aa12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 C7orf26Q96N11 449 aa12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 EFR3BQ9Y2G0 817 aa12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 CYP2D6P10635 497 aa12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 YWHABP31946 246 aaKnown RBP12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 MRPL4Q9BYD3 311 aaKnown RBP12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 NINJ2Q9NZG7 142 aa12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 TPBGLP0DKB5 382 aa12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 MAGEB16A2A368 324 aa12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 CCDC78A2IDD5 438 aa12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 CYP1A2P05177 515 aa12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 ALAS1P13196 640 aa12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 RAD23AP54725 363 aa12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 MRPL28Q13084 256 aaKnown RBP12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 SF3B3Q15393 1217 aaKnown RBP12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 FAM83EQ2M2I3 478 aa12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 EXOC3L1Q86VI1 746 aa12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 L3MBTL3Q96JM7 780 aaPredicted RBP12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 HEXIM2Q96MH2 286 aaKnown RBP12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 PCDHA10Q9Y5I2 948 aa12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 RCCD1A6NED2 376 aa12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 PYGLP06737 847 aa12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 CLEC16AQ2KHT3 1053 aa12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 KLHL25Q9H0H3 589 aa12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 MUC13Q9H3R2 512 aa12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 UNC45AQ9H3U1 944 aa12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 SYNPO2Q9UMS6 1093 aa12.09□□□□□ -0.47
DNMT3A-201ENST00000264709 LYNP07948 512 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms