RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 UNKQ9C0B0 810 aaKnown RBP13.57□□□□□ -0.24
SNX1-201ENST00000261889 EBF3Q9H4W6 596 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 PCDHGB4Q9UN71 923 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 PCDHGB5Q9Y5G0 923 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 H7C0C1 242 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 CDKN2BP42772 138 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 ATP5OP48047 213 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 OLIG2Q13516 323 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 IL31Q6EBC2 164 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 OR52E8Q6IFG1 317 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 LRRC71Q8N4P6 559 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 KCTD6Q8NC69 237 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 ADAM32Q8TC27 787 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 SLC26A7Q8TE54 656 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 MORC4Q8TE76 937 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 NMD3Q96D46 503 aaKnown RBP13.57□□□□□ -0.24
SNX1-201ENST00000261889 PANX3Q96QZ0 392 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 SRPK1Q96SB4 655 aaKnown RBP13.57□□□□□ -0.24
SNX1-201ENST00000261889 IDI2Q9BXS1 227 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 ARHGEF4Q9NR80 690 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 RAB6BQ9NRW1 208 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 ZNRF3Q9ULT6 936 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 UBE4BO95155 1302 aa13.56□□□□□ -0.24
SNX1-201ENST00000261889 CCDC160A6NGH7 325 aa13.56□□□□□ -0.24
SNX1-201ENST00000261889 ALOX15BO15296 676 aa13.56□□□□□ -0.24
SNX1-201ENST00000261889 C6orf222P0C671 652 aaPredicted RBP13.56□□□□□ -0.24
SNX1-201ENST00000261889 SLC1A1P43005 524 aa13.56□□□□□ -0.24
SNX1-201ENST00000261889 RGS7P49802 495 aa13.56□□□□□ -0.24
SNX1-201ENST00000261889 EIF3EP60228 445 aaKnown RBP13.56□□□□□ -0.24
SNX1-201ENST00000261889 SLC45A4Q5BKX6 768 aa13.56□□□□□ -0.24
SNX1-201ENST00000261889 TFDP3Q5H9I0 405 aa13.56□□□□□ -0.24
SNX1-201ENST00000261889 DARS2Q6PI48 645 aaKnown RBP13.56□□□□□ -0.24
SNX1-201ENST00000261889 TRIM50Q86XT4 487 aa13.56□□□□□ -0.24
SNX1-201ENST00000261889 MPP5Q8N3R9 675 aa13.56□□□□□ -0.24
SNX1-201ENST00000261889 ATG4CQ96DT6 458 aa13.56□□□□□ -0.24
SNX1-201ENST00000261889 PTCD3Q96EY7 689 aaKnown RBP13.56□□□□□ -0.24
SNX1-201ENST00000261889 GBP5Q96PP8 586 aa13.56□□□□□ -0.24
SNX1-201ENST00000261889 PARVAQ9NVD7 372 aa13.56□□□□□ -0.24
SNX1-201ENST00000261889 TMOD2Q9NZR1 351 aa13.56□□□□□ -0.24
SNX1-201ENST00000261889 SMG5Q9UPR3 1016 aaKnown RBP13.56□□□□□ -0.24
SNX1-201ENST00000261889 EXOC7Q9UPT5 735 aa13.56□□□□□ -0.24
SNX1-201ENST00000261889 AFG3L2Q9Y4W6 797 aa13.56□□□□□ -0.24
SNX1-201ENST00000261889 P4HA2O15460 535 aa13.56□□□□□ -0.24
SNX1-201ENST00000261889 MAP3K7O43318 606 aa13.56□□□□□ -0.24
SNX1-201ENST00000261889 DLDP09622 509 aaKnown RBP13.56□□□□□ -0.24
SNX1-201ENST00000261889 NELFEP18615 380 aaKnown RBP13.56□□□□□ -0.24
SNX1-201ENST00000261889 CAV1Q03135 178 aa13.56□□□□□ -0.24
SNX1-201ENST00000261889 SLC34A1Q06495 639 aa13.56□□□□□ -0.24
SNX1-201ENST00000261889 PTP4A2Q12974 167 aa13.56□□□□□ -0.24
SNX1-201ENST00000261889 OASLQ15646 514 aaKnown RBP13.56□□□□□ -0.24
SNX1-201ENST00000261889 WDTC1Q8N5D0 677 aa13.56□□□□□ -0.24
SNX1-201ENST00000261889 BANPQ8N9N5 519 aa13.56□□□□□ -0.24
SNX1-201ENST00000261889 CCDC110Q8TBZ0 833 aa13.56□□□□□ -0.24
SNX1-201ENST00000261889 LNPEPQ9UIQ6 1025 aa13.56□□□□□ -0.24
SNX1-201ENST00000261889 WDR64B1ANS9 1081 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 PRPF4O43172 522 aaKnown RBP eCLIP13.55□□□□□ -0.24
SNX1-201ENST00000261889 RNASEH1O60930 286 aaKnown RBP13.55□□□□□ -0.24
SNX1-201ENST00000261889 MUTP22033 750 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 RPL10AP62906 217 aaKnown RBP13.55□□□□□ -0.24
SNX1-201ENST00000261889 PPP2R5DQ14738 602 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 ZACNQ401N2 412 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 PTPN20Q4JDL3 420 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 TMEM192Q8IY95 271 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 ATP11CQ8NB49 1132 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 MTMR14Q8NCE2 650 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 INPP5DQ92835 1189 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 FAM136AQ96C01 138 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 MFSD14AQ96MC6 490 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 CYLDQ9NQC7 956 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 TMEM191CA6NGB0 347 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 SIGLEC16A6NMB1 481 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 COPEO14579 308 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 PSTPIP1O43586 416 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 TMEM191BP0C7N4 346 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 MAN1A1P33908 653 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 RBBP5Q15291 538 aaKnown RBP13.55□□□□□ -0.24
SNX1-201ENST00000261889 CASC4Q6P4E1 433 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 PDIK1LQ8N165 341 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 PPP1R14CQ8TAE6 165 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 FAF2Q96CS3 445 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 UBE2OQ9C0C9 1292 aaKnown RBP13.55□□□□□ -0.24
SNX1-201ENST00000261889 EHMT1Q9H9B1 1298 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 MRPL47Q9HD33 250 aaKnown RBP13.55□□□□□ -0.24
SNX1-201ENST00000261889 SMYD2Q9NRG4 433 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 ZNF358Q9NW07 568 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 SLC7A8Q9UHI5 535 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 COQ4Q9Y3A0 265 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 K7ERI5 159 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 ITM2AO43736 263 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 LRCH4O75427 683 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 DGKIO75912 1065 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 C4BPAP04003 597 aaKnown RBP13.55□□□□□ -0.24
SNX1-201ENST00000261889 SKIV2L2P42285 1042 aaKnown RBP13.55□□□□□ -0.24
SNX1-201ENST00000261889 RTP1P59025 263 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 PSMC1P62191 440 aaKnown RBP13.55□□□□□ -0.24
SNX1-201ENST00000261889 MRPS35P82673 323 aaKnown RBP13.55□□□□□ -0.24
SNX1-201ENST00000261889 CDK16Q00536 496 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 DLGAP5Q15398 846 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 PLEKHA7Q6IQ23 1121 aa13.55□□□□□ -0.24
SNX1-201ENST00000261889 DLK2Q6UY11 383 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms