RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 AGGF1Q8N302 714 aaeCLIP17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 CMASQ8NFW8 434 aaPredicted RBP17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 GPR20Q99678 358 aa17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 CDT1Q9H211 546 aa17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 EFR3BQ9Y2G0 817 aa17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 LACTBL1A8MY62 500 aa17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 MCF2LO15068 1137 aa17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 MED7O43513 233 aa17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 B4GALT4O60513 344 aa17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 EDNRBP24530 442 aa17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 CDH6P55285 790 aa17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 IGBP1P78318 339 aa17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 PTPN11Q06124 597 aaPredicted RBP17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 FAAP100Q0VG06 881 aa17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 RASA2Q15283 850 aa17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 KLHL38Q2WGJ6 581 aa17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 JADE1Q6IE81 842 aa17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 PRPF39Q86UA1 669 aaKnown RBP17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 PRR11Q96HE9 360 aaPredicted RBP17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 FAM111AQ96PZ2 611 aa17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 MANSC1Q9H8J5 431 aa17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 ANK1P16157 1881 aa17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 H0Y3Z8 333 aa17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 ACKR2O00590 384 aa17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 RNF8O76064 485 aa17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 YWHAGP61981 247 aaKnown RBP eCLIP17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 PTK7Q13308 1070 aa17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 ANKRD20A2Q5SQ80 823 aa17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 ANKRD20A1Q5TYW2 823 aa17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 ANKRD20A3Q5VUR7 823 aa17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 MAP1SQ66K74 1059 aaPredicted RBP17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 FNIP1Q8TF40 1166 aa17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 TTC17Q96AE7 1141 aa17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 HEXIM2Q96MH2 286 aaKnown RBP17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 LBHD1Q9BQE6 289 aaPredicted RBP17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 ADPGKQ9BRR6 497 aa17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 BCO2Q9BYV7 579 aa17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 RPF1Q9H9Y2 349 aaKnown RBP17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 GPATCH2LQ9NWQ4 482 aa17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 SSC5DA1L4H1 1573 aa17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 LPXNO60711 386 aa17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 MT-ND3P03897 115 aa17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 PYGBP11216 843 aa17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 SURF1Q15526 300 aa17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 FYB2Q5VWT5 728 aa17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 EFCAB12Q6NXP0 572 aa17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 CLNKQ7Z7G1 428 aa17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 TTC8Q8TAM2 541 aa17.09■□□□□ 0.33
TM9SF1-201ENST00000261789 ENTPD5O75356 428 aa17.08■□□□□ 0.33
TM9SF1-201ENST00000261789 GPD2P43304 727 aa17.08■□□□□ 0.33
TM9SF1-201ENST00000261789 ROR1Q01973 937 aa17.08■□□□□ 0.33
TM9SF1-201ENST00000261789 VGLL4Q14135 290 aa17.08■□□□□ 0.33
TM9SF1-201ENST00000261789 CTC1Q2NKJ3 1217 aa17.08■□□□□ 0.33
TM9SF1-201ENST00000261789 PARP6Q2NL67 630 aa17.08■□□□□ 0.33
TM9SF1-201ENST00000261789 CYP4V2Q6ZWL3 525 aaPredicted RBP17.08■□□□□ 0.33
TM9SF1-201ENST00000261789 MIEF2Q96C03 454 aa17.08■□□□□ 0.33
TM9SF1-201ENST00000261789 CFAP36Q96G28 342 aa17.08■□□□□ 0.33
TM9SF1-201ENST00000261789 TMEM176AQ96HP8 235 aa17.08■□□□□ 0.33
TM9SF1-201ENST00000261789 CPB2Q96IY4 423 aa17.08■□□□□ 0.33
TM9SF1-201ENST00000261789 TRIM56Q9BRZ2 755 aaKnown RBP17.08■□□□□ 0.33
TM9SF1-201ENST00000261789 SPATC1LQ9H0A9 340 aa17.08■□□□□ 0.33
TM9SF1-201ENST00000261789 FZD8Q9H461 694 aa17.08■□□□□ 0.33
TM9SF1-201ENST00000261789 PPCSQ9HAB8 311 aa17.08■□□□□ 0.33
TM9SF1-201ENST00000261789 FBXO6Q9NRD1 293 aaPredicted RBP17.08■□□□□ 0.33
TM9SF1-201ENST00000261789 SLC5A4Q9NY91 659 aa17.08■□□□□ 0.33
TM9SF1-201ENST00000261789 IGKV6-21A0A0C4DH24 114 aa17.08■□□□□ 0.32
TM9SF1-201ENST00000261789 CFAP69A5D8W1 941 aa17.08■□□□□ 0.32
TM9SF1-201ENST00000261789 H7C0C1 242 aa17.08■□□□□ 0.32
TM9SF1-201ENST00000261789 C2CD2LO14523 706 aa17.08■□□□□ 0.32
TM9SF1-201ENST00000261789 PEX11AO75192 247 aa17.08■□□□□ 0.32
TM9SF1-201ENST00000261789 ATP5HO75947 161 aa17.08■□□□□ 0.32
TM9SF1-201ENST00000261789 ATP5OP48047 213 aa17.08■□□□□ 0.32
TM9SF1-201ENST00000261789 FBXO16Q8IX29 292 aaPredicted RBP17.08■□□□□ 0.32
TM9SF1-201ENST00000261789 CCDC33Q8N5R6 958 aa17.08■□□□□ 0.32
TM9SF1-201ENST00000261789 C12orf29Q8N999 325 aa17.08■□□□□ 0.32
TM9SF1-201ENST00000261789 CYTH2Q99418 400 aa17.08■□□□□ 0.32
TM9SF1-201ENST00000261789 SGIP1Q9BQI5 828 aa17.08■□□□□ 0.32
TM9SF1-201ENST00000261789 RAB6BQ9NRW1 208 aa17.08■□□□□ 0.32
TM9SF1-201ENST00000261789 HEY2Q9UBP5 337 aa17.08■□□□□ 0.32
TM9SF1-201ENST00000261789 HEY1Q9Y5J3 304 aa17.08■□□□□ 0.32
TM9SF1-201ENST00000261789 POLR2AP24928 1970 aaKnown RBP17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 DNAH12Q6ZR08 3092 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 CILPO75339 1184 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 SKAP2O75563 359 aaPredicted RBP17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 NEFHP12036 1026 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 CYP3A5P20815 502 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 BGNP21810 368 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 RGS7P49802 495 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 MBTD1Q05BQ5 628 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 SLC45A4Q5BKX6 768 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 SCYL2Q6P3W7 929 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 RFWD3Q6PCD5 774 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 CDHR3Q6ZTQ4 885 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 RIOX2Q8IUF8 465 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 RXFP2Q8WXD0 754 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 FAF2Q96CS3 445 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 MCRS1Q96EZ8 462 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 SPATA33Q96N06 139 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 MIPEPQ99797 713 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms