RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 BRAFP15056 766 aa14.47□□□□□ -0.09
CDH1-201ENST00000261769 RENBPP51606 427 aa14.47□□□□□ -0.09
CDH1-201ENST00000261769 TRMT10CQ7L0Y3 403 aaKnown RBP14.47□□□□□ -0.09
CDH1-201ENST00000261769 SH3BP5LQ7L8J4 393 aa14.47□□□□□ -0.09
CDH1-201ENST00000261769 HELQQ8TDG4 1101 aa14.47□□□□□ -0.09
CDH1-201ENST00000261769 HSD17B14Q9BPX1 270 aa14.47□□□□□ -0.09
CDH1-201ENST00000261769 CDT1Q9H211 546 aa14.47□□□□□ -0.09
CDH1-201ENST00000261769 Q9H521 79 aa14.47□□□□□ -0.09
CDH1-201ENST00000261769 SLC45A1Q9Y2W3 748 aa14.47□□□□□ -0.09
CDH1-201ENST00000261769 LMO7Q8WWI1 1683 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 TARSL2A2RTX5 802 aaKnown RBP14.46□□□□□ -0.09
CDH1-201ENST00000261769 INHAP05111 366 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 ADIGQ0VDE8 80 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 USP10Q14694 798 aaKnown RBP14.46□□□□□ -0.09
CDH1-201ENST00000261769 KCNA10Q16322 511 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 DCLRE1AQ6PJP8 1040 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 SLC35C1Q96A29 364 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 EML4Q9HC35 981 aaKnown RBP14.46□□□□□ -0.09
CDH1-201ENST00000261769 C20orf96Q9NUD7 363 aaPredicted RBP14.46□□□□□ -0.09
CDH1-201ENST00000261769 SMPD4Q9NXE4 827 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 PRR23AA6NEV1 266 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 VCLP18206 1134 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 ZNF135P52742 658 aaPredicted RBP14.46□□□□□ -0.09
CDH1-201ENST00000261769 TRADDQ15628 312 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 DNAJC7Q99615 494 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 ZSWIM1Q9BR11 485 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 SLC13A1Q9BZW2 595 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 BTBD7Q9P203 1132 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 RIPK3Q9Y572 518 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 ORC6Q9Y5N6 252 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 CHD2O14647 1828 aaKnown RBP14.46□□□□□ -0.09
CDH1-201ENST00000261769 FGBP02675 491 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 CSH1P0DML2 217 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 CSH2P0DML3 217 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 LAG3P18627 525 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 CLEC16AQ2KHT3 1053 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 MRNIPQ6NTE8 343 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 PALB2Q86YC2 1186 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 ANKMY2Q8IV38 441 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 HS6ST3Q8IZP7 471 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 LZTR1Q8N653 840 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 TMEM161BQ8NDZ6 487 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 TPCN2Q8NHX9 752 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 SKA1Q96BD8 255 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 PPWD1Q96BP3 646 aaKnown RBP14.46□□□□□ -0.09
CDH1-201ENST00000261769 FAM105AQ9NUU6 356 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 USP18Q9UMW8 372 aa14.46□□□□□ -0.09
CDH1-201ENST00000261769 NALCNQ8IZF0 1738 aa14.46□□□□□ -0.1
CDH1-201ENST00000261769 PROSCO94903 275 aa14.46□□□□□ -0.1
CDH1-201ENST00000261769 WEE1P30291 646 aa14.46□□□□□ -0.1
CDH1-201ENST00000261769 CCDC38Q502W7 563 aa14.46□□□□□ -0.1
CDH1-201ENST00000261769 HABP4Q5JVS0 413 aaKnown RBP14.46□□□□□ -0.1
CDH1-201ENST00000261769 TMA16Q96EY4 203 aaKnown RBP14.46□□□□□ -0.1
CDH1-201ENST00000261769 ASAH2Q9NR71 780 aa14.46□□□□□ -0.1
CDH1-201ENST00000261769 STK39Q9UEW8 545 aa14.46□□□□□ -0.1
CDH1-201ENST00000261769 CDH9Q9ULB4 789 aa14.46□□□□□ -0.1
CDH1-201ENST00000261769 ANKRD63C9JTQ0 380 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 CLCN6P51797 869 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 ZSCAN26Q16670 478 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 HSDL1Q3SXM5 330 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 TFDP3Q5H9I0 405 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 KCNK18Q7Z418 384 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 SLC13A5Q86YT5 568 aaPredicted RBP14.45□□□□□ -0.1
CDH1-201ENST00000261769 CCNJLQ8IV13 435 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 ETNPPLQ8TBG4 499 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 ACO2Q99798 780 aaKnown RBP14.45□□□□□ -0.1
CDH1-201ENST00000261769 ADGRE3Q9BY15 652 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 UPF3AQ9H1J1 476 aaKnown RBP14.45□□□□□ -0.1
CDH1-201ENST00000261769 MFSD1Q9H3U5 465 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 SCUBE2Q9NQ36 999 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 CBX4O00257 560 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 PTPN1P18031 435 aaKnown RBP14.45□□□□□ -0.1
CDH1-201ENST00000261769 HMOX2P30519 316 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 CDKAL1Q5VV42 579 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 UGT3A1Q6NUS8 523 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 ABHD15Q6UXT9 468 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 ATXN7L3BQ96GX2 97 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 TXLNGQ9NUQ3 528 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 FGFR1OP2Q9NVK5 253 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 USP20Q9Y2K6 914 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 MRPS23Q9Y3D9 190 aaKnown RBP14.45□□□□□ -0.1
CDH1-201ENST00000261769 PRPF4O43172 522 aaKnown RBP eCLIP14.45□□□□□ -0.1
CDH1-201ENST00000261769 RAMP2O60895 175 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 ESRRAP11474 423 aaPredicted RBP14.45□□□□□ -0.1
CDH1-201ENST00000261769 BDNFP23560 247 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 ICAM3P32942 547 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 GRM5P41594 1212 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 CRHR2Q13324 411 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 MORF4L2Q15014 288 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 SLC47A2Q86VL8 602 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 PPIL6Q8IXY8 311 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 FAM71DQ8N9W8 422 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 EDEM1Q92611 657 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 MRFAP1Q9Y605 127 aa14.45□□□□□ -0.1
CDH1-201ENST00000261769 LRRIQ3A6PVS8 624 aaPredicted RBP14.44□□□□□ -0.1
CDH1-201ENST00000261769 PHF20L1A8MW92 1017 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 FNTAP49354 379 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 PSEN1P49768 467 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 NAT9Q9BTE0 207 aa14.44□□□□□ -0.1
CDH1-201ENST00000261769 KDM4CQ9H3R0 1056 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms