RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 FAM183BPQ6ZVS7 135 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 CCDC127Q96BQ5 260 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 C18orf8Q96DM3 657 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 PARK7Q99497 189 aaKnown RBP6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 SDF4Q9BRK5 362 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 NT5C3AQ9H0P0 336 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 ISY1Q9ULR0 285 aaKnown RBP6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 IGLV3-10A0A075B6K4 115 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 DNM1LO00429 736 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 HSPA1AP0DMV8 641 aaKnown RBP6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 HSPA1BP0DMV9 641 aaKnown RBP6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 L1CAMP32004 1257 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 GYS2P54840 703 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 NOP14P78316 857 aaKnown RBP6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 TLE2Q04725 743 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 DUPD1Q68J44 220 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 CXorf57Q6NSI4 855 aaKnown RBP6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 ARMC9Q7Z3E5 817 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 MYRIPQ8NFW9 859 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 NEK9Q8TD19 979 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 S1PR5Q9H228 398 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 XPNPEP3Q9NQH7 507 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 KIAA0391O15091 583 aaKnown RBP6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 HBP1O60381 514 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 KINO60870 393 aaKnown RBP6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 PALMO75781 387 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 FTCDO95954 541 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 WSCD1Q658N2 575 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 LCLAT1Q6UWP7 414 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 Q6ZNB5 142 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 TRIM6Q9C030 488 aaPredicted RBP6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 MCOLN1Q9GZU1 580 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 CHRDQ9H2X0 955 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 PLEKHA4Q9H4M7 779 aa6.01□□□□□ -1.45
TOPBP1-201ENST00000260810 HMGCRP04035 888 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 GRK4P32298 578 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 OR6J1Q8NGC5 347 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 ORAI3Q9BRQ5 295 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 PRDM5Q9NQX1 630 aaPredicted RBP6□□□□□ -1.45
TOPBP1-201ENST00000260810 DTLQ9NZJ0 730 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 TMEM189-UBE2V1I3L0A0 370 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 LETM1O95202 739 aaPredicted RBP6□□□□□ -1.45
TOPBP1-201ENST00000260810 METTL18O95568 372 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 PRKCBP05771 671 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 ACRP10323 421 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 IGBP1P78318 339 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 GPS2Q13227 327 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 ZNF394Q53GI3 561 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 DNTTIP2Q5QJE6 756 aaKnown RBP6□□□□□ -1.45
TOPBP1-201ENST00000260810 PRPF39Q86UA1 669 aaKnown RBP6□□□□□ -1.45
TOPBP1-201ENST00000260810 PASD1Q8IV76 773 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 C1orf131Q8NDD1 294 aaKnown RBP6□□□□□ -1.45
TOPBP1-201ENST00000260810 NAT14Q8WUY8 206 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 TCEAL4Q96EI5 215 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 METTL14Q9HCE5 456 aaKnown RBP6□□□□□ -1.45
TOPBP1-201ENST00000260810 GDF3Q9NR23 364 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 SLC12A6Q9UHW9 1150 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 USP9XQ93008 2570 aaPredicted RBP6□□□□□ -1.45
TOPBP1-201ENST00000260810 TARM1B6A8C7 271 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 CCP110O43303 1012 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 GH1P01241 217 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 PSAPP07602 524 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 TPBGLP0DKB5 382 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 HAPLN1P10915 354 aaPredicted RBP6□□□□□ -1.45
TOPBP1-201ENST00000260810 KRT10P13645 584 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 KCNJ1P48048 391 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 MRPS6P82932 125 aaKnown RBP6□□□□□ -1.45
TOPBP1-201ENST00000260810 UBXN1Q04323 297 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 PDE4CQ08493 712 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 TRAF1Q13077 416 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 BAG1Q99933 345 aaPredicted RBP6□□□□□ -1.45
TOPBP1-201ENST00000260810 RBAKQ9NYW8 714 aaPredicted RBP6□□□□□ -1.45
TOPBP1-201ENST00000260810 ALG6Q9Y672 507 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 C5orf67F2Z3F1 127 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 MICAL2O94851 1124 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 CLSTN1O94985 981 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 TBX6O95947 436 aaPredicted RBP6□□□□□ -1.45
TOPBP1-201ENST00000260810 TNFAIP3P21580 790 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 GBE1Q04446 702 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 ZNF211Q13398 564 aaPredicted RBP6□□□□□ -1.45
TOPBP1-201ENST00000260810 WDR49Q8IV35 697 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 C2orf69Q8N8R5 385 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 SLC22A17Q8WUG5 538 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 CASKIN2Q8WXE0 1202 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 RTP4Q96DX8 246 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 SMARCAD1Q9H4L7 1026 aa6□□□□□ -1.45
TOPBP1-201ENST00000260810 C2orf78A6NCI8 922 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 BUB1O43683 1085 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 UGT1A9O60656 530 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 ZMPSTE24O75844 475 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 GJB5O95377 273 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 SOD1P00441 154 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 CTSHP09668 335 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 AKR1A1P14550 325 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 IDEP14735 1019 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 ZFP36L2P47974 494 aaKnown RBP5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 DNM2P50570 870 aa5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 PSMC1P62191 440 aaKnown RBP5.99□□□□□ -1.45
TOPBP1-201ENST00000260810 GAS6Q14393 721 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms