RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 BCL7CQ8WUZ0 217 aaPredicted RBP9.93□□□□□ -0.82
NIP7-202ENST00000254941 UBXN4Q92575 508 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 GOLGA1Q92805 767 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 RNPC3Q96LT9 517 aaKnown RBP9.93□□□□□ -0.82
NIP7-202ENST00000254941 KCNK16Q96T55 309 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.93□□□□□ -0.821e-11■□□□□ 9.9
NIP7-202ENST00000254941 PNPLA8Q9NP80 782 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 SMARCAL1Q9NZC9 954 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 MYO16Q9Y6X6 1858 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 CARNS1A5YM72 827 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 OR6C75A6NL08 312 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 HHLA1C9JL84 531 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 PGRMC1O00264 195 aaKnown RBP9.93□□□□□ -0.82
NIP7-202ENST00000254941 LRCH4O75427 683 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 PYGMP11217 842 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 PDGFRAP16234 1089 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 GPD1P21695 349 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 FLT3P36888 993 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 TAS2R40P59535 323 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 RNASE9P60153 205 aaKnown RBP9.93□□□□□ -0.82
NIP7-202ENST00000254941 FPGSQ05932 587 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 ADCY1Q08828 1119 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 NAA30Q147X3 362 aaPredicted RBP9.93□□□□□ -0.82
NIP7-202ENST00000254941 TAF5Q15542 800 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 CLUL1Q15846 466 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 NFE2Q16621 373 aaPredicted RBP9.93□□□□□ -0.82
NIP7-202ENST00000254941 CTXN3Q4LDR2 81 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 EFHC1Q5JVL4 640 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 ZNF280DQ6N043 979 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 TRNP1Q6NT89 227 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 KCNT2Q6UVM3 1135 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 CEP57Q86XR8 500 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 SPATA2LQ8IUW3 424 aaPredicted RBP9.93□□□□□ -0.82
NIP7-202ENST00000254941 RNF168Q8IYW5 571 aaPredicted RBP9.93□□□□□ -0.82
NIP7-202ENST00000254941 DCP1BQ8IZD4 617 aaKnown RBP9.93□□□□□ -0.82
NIP7-202ENST00000254941 ARFGAP1Q8N6T3 406 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 NOA1Q8NC60 698 aaKnown RBP9.93□□□□□ -0.82
NIP7-202ENST00000254941 CLEC4CQ8WTT0 213 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 BADQ92934 168 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 IGSF21Q96ID5 467 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 CNPY3Q9BT09 278 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 TTPALQ9BTX7 342 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 PLVAPQ9BX97 442 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 OXCT2Q9BYC2 517 aaPredicted RBP9.93□□□□□ -0.82
NIP7-202ENST00000254941 RHOBTB2Q9BYZ6 727 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 LRRC4Q9HBW1 653 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 DMAP1Q9NPF5 467 aaPredicted RBP9.93□□□□□ -0.82
NIP7-202ENST00000254941 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.93□□□□□ -0.82
NIP7-202ENST00000254941 USTQ9Y2C2 406 aa9.93□□□□□ -0.82
NIP7-202ENST00000254941 V9GYY5 206 aaPredicted RBP9.93□□□□□ -0.82
NIP7-202ENST00000254941 RANBP2P49792 3224 aaKnown RBP9.92□□□□□ -0.82
NIP7-202ENST00000254941 DPYSL4O14531 572 aa9.92□□□□□ -0.82
NIP7-202ENST00000254941 DYNC1I1O14576 645 aa9.92□□□□□ -0.82
NIP7-202ENST00000254941 TBC1D4O60343 1298 aa9.92□□□□□ -0.82
NIP7-202ENST00000254941 GRAP2O75791 330 aa9.92□□□□□ -0.82
NIP7-202ENST00000254941 FBXO21O94952 628 aa9.92□□□□□ -0.82
NIP7-202ENST00000254941 FGBP02675 491 aa9.92□□□□□ -0.82
NIP7-202ENST00000254941 OR4Q2P0C623 313 aa9.92□□□□□ -0.82
NIP7-202ENST00000254941 TCF4P15884 667 aa9.92□□□□□ -0.82
NIP7-202ENST00000254941 TKTL1P51854 596 aa9.92□□□□□ -0.82
NIP7-202ENST00000254941 MRPS5P82675 430 aaKnown RBP9.92□□□□□ -0.82
NIP7-202ENST00000254941 ZNF211Q13398 564 aaPredicted RBP9.92□□□□□ -0.82
NIP7-202ENST00000254941 BTG3Q14201 252 aaPredicted RBP9.92□□□□□ -0.82
NIP7-202ENST00000254941 SLC39A12Q504Y0 691 aa9.92□□□□□ -0.82
NIP7-202ENST00000254941 RTP2Q5QGT7 225 aa9.92□□□□□ -0.82
NIP7-202ENST00000254941 FAM117BQ6P1L5 589 aa9.92□□□□□ -0.82
NIP7-202ENST00000254941 ANKS3Q6ZW76 656 aa9.92□□□□□ -0.82
NIP7-202ENST00000254941 ZNF365Q70YC5 407 aa9.92□□□□□ -0.82
NIP7-202ENST00000254941 POLNQ7Z5Q5 900 aa9.92□□□□□ -0.82
NIP7-202ENST00000254941 KATNAL2Q8IYT4 538 aa9.92□□□□□ -0.82
NIP7-202ENST00000254941 SIX6OS1Q8N1H7 587 aa9.92□□□□□ -0.82
NIP7-202ENST00000254941 RXFP2Q8WXD0 754 aa9.92□□□□□ -0.82
NIP7-202ENST00000254941 SLC39A7Q92504 469 aa9.92□□□□□ -0.82
NIP7-202ENST00000254941 FUBP3Q96I24 572 aaKnown RBP eCLIP9.92□□□□□ -0.82
NIP7-202ENST00000254941 B3GALT6Q96L58 329 aa9.92□□□□□ -0.82
NIP7-202ENST00000254941 NAP1L3Q99457 506 aaPredicted RBP9.92□□□□□ -0.82
NIP7-202ENST00000254941 CNGB3Q9NQW8 809 aa9.92□□□□□ -0.82
NIP7-202ENST00000254941 ASNSD1Q9NWL6 643 aa9.92□□□□□ -0.82
NIP7-202ENST00000254941 METRNQ9UJH8 293 aa9.92□□□□□ -0.82
NIP7-202ENST00000254941 CHD7Q9P2D1 2997 aa9.92□□□□□ -0.82
NIP7-202ENST00000254941 H7C4K7 107 aa9.91□□□□□ -0.82
NIP7-202ENST00000254941 HSF2BPO75031 334 aa9.91□□□□□ -0.82
NIP7-202ENST00000254941 RNF8O76064 485 aa9.91□□□□□ -0.82
NIP7-202ENST00000254941 FGGP02679 453 aa9.91□□□□□ -0.82
NIP7-202ENST00000254941 GLI1P08151 1106 aa9.91□□□□□ -0.82
NIP7-202ENST00000254941 PCK1P35558 622 aa9.91□□□□□ -0.82
NIP7-202ENST00000254941 NDUFV1P49821 464 aa9.91□□□□□ -0.82
NIP7-202ENST00000254941 SLC25A11Q02978 314 aaKnown RBP9.91□□□□□ -0.82
NIP7-202ENST00000254941 C2orf54Q08AI8 447 aa9.91□□□□□ -0.82
NIP7-202ENST00000254941 USP41Q3LFD5 358 aa9.91□□□□□ -0.82
NIP7-202ENST00000254941 CCDC14Q49A88 953 aa9.91□□□□□ -0.82
NIP7-202ENST00000254941 TEX35Q5T0J7 233 aa9.91□□□□□ -0.82
NIP7-202ENST00000254941 SEL1L2Q5TEA6 688 aa9.91□□□□□ -0.82
NIP7-202ENST00000254941 AADACL2Q6P093 401 aa9.91□□□□□ -0.82
NIP7-202ENST00000254941 TAS1R1Q7RTX1 841 aa9.91□□□□□ -0.82
NIP7-202ENST00000254941 GPRIN1Q7Z2K8 1008 aa9.91□□□□□ -0.82
NIP7-202ENST00000254941 MMGT1Q8N4V1 131 aa9.91□□□□□ -0.82
NIP7-202ENST00000254941 EXD1Q8NHP7 514 aa9.91□□□□□ -0.82
NIP7-202ENST00000254941 TSC1Q92574 1164 aa9.91□□□□□ -0.82
NIP7-202ENST00000254941 CFAP57Q96MR6 1250 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms