RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 SYPL2Q5VXT5 272 aa12.22□□□□□ -0.45
LIN28A-201ENST00000254231 GPRIN1Q7Z2K8 1008 aa12.22□□□□□ -0.45
LIN28A-201ENST00000254231 LRRTM3Q86VH5 581 aa12.22□□□□□ -0.45
LIN28A-201ENST00000254231 MYLPFQ96A32 169 aa12.22□□□□□ -0.45
LIN28A-201ENST00000254231 AGAP3Q96P47 875 aa12.22□□□□□ -0.45
LIN28A-201ENST00000254231 STXBP5LQ9Y2K9 1186 aa12.22□□□□□ -0.45
LIN28A-201ENST00000254231 CDY1Q9Y6F8 540 aa12.22□□□□□ -0.45
LIN28A-201ENST00000254231 PLXNA1Q9UIW2 1896 aa12.22□□□□□ -0.45
LIN28A-201ENST00000254231 LOC102724159A0A0B4J2E5 919 aa12.21□□□□□ -0.45
LIN28A-201ENST00000254231 F7P08709 466 aaPredicted RBP12.21□□□□□ -0.45
LIN28A-201ENST00000254231 RFX1P22670 979 aa12.21□□□□□ -0.45
LIN28A-201ENST00000254231 MIPP30301 263 aa12.21□□□□□ -0.45
LIN28A-201ENST00000254231 OR1D2P34982 312 aa12.21□□□□□ -0.45
LIN28A-201ENST00000254231 AMPD2Q01433 879 aa12.21□□□□□ -0.45
LIN28A-201ENST00000254231 IFFO1Q0D2I5 559 aa12.21□□□□□ -0.45
LIN28A-201ENST00000254231 PWP2Q15269 919 aaKnown RBP12.21□□□□□ -0.45
LIN28A-201ENST00000254231 TMC7Q7Z402 723 aa12.21□□□□□ -0.45
LIN28A-201ENST00000254231 CELF6Q96J87 481 aaKnown RBP12.21□□□□□ -0.45
LIN28A-201ENST00000254231 ISCUQ9H1K1 167 aa12.21□□□□□ -0.45
LIN28A-201ENST00000254231 FAM204AQ9H8W3 233 aa12.21□□□□□ -0.45
LIN28A-201ENST00000254231 ANKZF1Q9H8Y5 726 aa12.21□□□□□ -0.45
LIN28A-201ENST00000254231 MOXD2PA6NHM9 499 aa12.21□□□□□ -0.45
LIN28A-201ENST00000254231 ENPP3O14638 875 aa12.21□□□□□ -0.45
LIN28A-201ENST00000254231 NRP1O14786 923 aa12.21□□□□□ -0.45
LIN28A-201ENST00000254231 ERLIN1O75477 346 aa12.21□□□□□ -0.45
LIN28A-201ENST00000254231 CALB1P05937 261 aa12.21□□□□□ -0.45
LIN28A-201ENST00000254231 MMP8P22894 467 aa12.21□□□□□ -0.45
LIN28A-201ENST00000254231 BASP1P80723 227 aaKnown RBP12.21□□□□□ -0.45
LIN28A-201ENST00000254231 PTK7Q13308 1070 aa12.21□□□□□ -0.45
LIN28A-201ENST00000254231 LRRC26Q2I0M4 334 aa12.21□□□□□ -0.45
LIN28A-201ENST00000254231 TCTN1Q2MV58 587 aa12.21□□□□□ -0.45
LIN28A-201ENST00000254231 HSP90B2PQ58FF3 399 aa12.21□□□□□ -0.45
LIN28A-201ENST00000254231 KIAA0319Q5VV43 1072 aa12.21□□□□□ -0.45
LIN28A-201ENST00000254231 TBK1Q9UHD2 729 aa12.21□□□□□ -0.45
LIN28A-201ENST00000254231 RP1L1Q8IWN7 2480 aaPredicted RBP12.21□□□□□ -0.46
LIN28A-201ENST00000254231 MAPK13O15264 365 aa12.21□□□□□ -0.46
LIN28A-201ENST00000254231 ACSL3O95573 720 aa12.21□□□□□ -0.46
LIN28A-201ENST00000254231 RARAP10276 462 aa12.21□□□□□ -0.46
LIN28A-201ENST00000254231 GZMAP12544 262 aa12.21□□□□□ -0.46
LIN28A-201ENST00000254231 DR1Q01658 176 aa12.21□□□□□ -0.46
LIN28A-201ENST00000254231 FUKQ8N0W3 1084 aa12.21□□□□□ -0.46
LIN28A-201ENST00000254231 USP38Q8NB14 1042 aa12.21□□□□□ -0.46
LIN28A-201ENST00000254231 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.21□□□□□ -0.46
LIN28A-201ENST00000254231 OSBPL8Q9BZF1 889 aa12.21□□□□□ -0.46
LIN28A-201ENST00000254231 PLK2Q9NYY3 685 aa12.21□□□□□ -0.46
LIN28A-201ENST00000254231 UBP1Q9NZI7 540 aa12.21□□□□□ -0.46
LIN28A-201ENST00000254231 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.21□□□□□ -0.46
LIN28A-201ENST00000254231 CHD9Q3L8U1 2897 aa12.21□□□□□ -0.46
LIN28A-201ENST00000254231 YJEFN3A6XGL0 299 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 E7ENQ6 273 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 PAPSS1O43252 624 aaPredicted RBP12.2□□□□□ -0.46
LIN28A-201ENST00000254231 ATXN8OSP0DMR3 200 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 IL1R2P27930 398 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 GTF2F1P35269 517 aaKnown RBP eCLIP12.2□□□□□ -0.46
LIN28A-201ENST00000254231 GPD2P43304 727 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 LMAN1P49257 510 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 PAPD7Q5XG87 772 aaKnown RBP12.2□□□□□ -0.46
LIN28A-201ENST00000254231 THEM5Q8N1Q8 247 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 TTC8Q8TAM2 541 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 ZNF512Q96ME7 567 aaPredicted RBP12.2□□□□□ -0.46
LIN28A-201ENST00000254231 CRTAC1Q9NQ79 661 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 TMEM30AQ9NV96 361 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 SLC38A7Q9NVC3 462 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 STIM2Q9P246 746 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 Q9Y3F1 56 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 HADHQ16836 314 aaKnown RBP12.2□□□□□ -0.46
LIN28A-201ENST00000254231 FAM187BQ17R55 369 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 SLC39A5Q6ZMH5 540 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 PPP1R21Q6ZMI0 780 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 ANKS1BQ7Z6G8 1248 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 OR10T2Q8NGX3 314 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 KBTBD7Q8WVZ9 684 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 TMEM169Q96HH4 297 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 HHIPL1Q96JK4 782 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 CYP4F11Q9HBI6 524 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 WBP1LQ9NX94 342 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 UTP11Q9Y3A2 253 aaKnown RBP12.2□□□□□ -0.46
LIN28A-201ENST00000254231 E2F8A0AVK6 867 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 TUSC3Q13454 348 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 IKBKEQ14164 716 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 CA9Q16790 459 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 MON1BQ7L1V2 547 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 TFAP2DQ7Z6R9 452 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 GPR161Q8N6U8 529 aaKnown RBP12.2□□□□□ -0.46
LIN28A-201ENST00000254231 LRRC57Q8N9N7 239 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 MFHAS1Q9Y4C4 1052 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 DAAM1Q9Y4D1 1078 aa12.2□□□□□ -0.46
LIN28A-201ENST00000254231 FOXO6A8MYZ6 492 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 PJA2O43164 708 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 BANF1O75531 89 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 FAAP100Q0VG06 881 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 EFEMP1Q12805 493 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 IRF5Q13568 498 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 COL9A2Q14055 689 aaPredicted RBP12.19□□□□□ -0.46
LIN28A-201ENST00000254231 DARS2Q6PI48 645 aaKnown RBP12.19□□□□□ -0.46
LIN28A-201ENST00000254231 RNF135Q8IUD6 432 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 FMNL3Q8IVF7 1028 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 RHOT1Q8IXI2 618 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 FBXL5Q9UKA1 691 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 USP18Q9UMW8 372 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms