RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 ASAP3Q8TDY4 903 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 KLC2Q9H0B6 622 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 GRID1Q9ULK0 1009 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 ZBBXA8MT70 800 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 M0QZ92 97 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 FARP2O94887 1054 aaPredicted RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 IFNB1P01574 187 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 ZFXP17010 805 aaPredicted RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 SSTR3P32745 418 aaPredicted RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 MAGEA3P43357 314 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 VPS41P49754 854 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 PSMD7P51665 324 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 IFI35P80217 286 aaPredicted RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 SLC25A11Q02978 314 aaKnown RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 NAB1Q13506 487 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 PTPROQ16827 1216 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 MAP7D1Q3KQU3 841 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 NAIF1Q69YI7 327 aaPredicted RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 CWF19L1Q69YN2 538 aaKnown RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 PDZD4Q76G19 769 aaPredicted RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 C7orf31Q8N865 590 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 ICA1LQ8NDH6 482 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 TRPC4APQ8TEL6 797 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 RTP4Q96DX8 246 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 ZFRQ96KR1 1074 aaKnown RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 KIF9Q9HAQ2 790 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 PICK1Q9NRD5 415 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 TOPORSQ9NS56 1045 aaPredicted RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 KCNK4Q9NYG8 393 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 PPME1Q9Y570 386 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 CLUHO75153 1309 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 NYNRINQ9P2P1 1898 aaKnown RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 AP3B1O00203 1094 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 EDF1O60869 148 aaKnown RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 BAG2O95816 211 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 IQCF3P0C7M6 154 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 GNAT1P11488 350 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 MMP8P22894 467 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 ASPAP45381 313 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 GCLMP48507 274 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 SESN3P58005 492 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 RAB15P59190 212 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 YWHAGP61981 247 aaKnown RBP eCLIP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 ILF2Q12905 390 aaKnown RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 GRIK3Q13003 919 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 PDIA2Q13087 525 aaKnown RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 GPS1Q13098 491 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 RARS2Q5T160 578 aaKnown RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 TTC39BQ5VTQ0 682 aaPredicted RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 C1orf146Q5VVC0 180 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 PASD1Q8IV76 773 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 TERB1Q8NA31 727 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 SLC35B2Q8TB61 432 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 C1orf54Q8WWF1 131 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 FAM167BQ9BTA0 163 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 SYNDIG1Q9H7V2 258 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 ZNF277Q9NRM2 450 aaPredicted RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 DLGAP2Q9P1A6 1054 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 KANSL3Q9P2N6 904 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 SOWAHBA6NEL2 793 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 KPNA7A9QM74 516 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 TRAFD1O14545 582 aaPredicted RBP4.32□□□□□ -1.72
UBE4A-201ENST00000252108 MAGEC1O60732 1142 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 IL1BP01584 269 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 TNNC2P02585 160 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 SNRPAP09012 282 aaKnown RBP4.32□□□□□ -1.72
UBE4A-201ENST00000252108 TCF4P15884 667 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 MX2P20592 715 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 AP1B1Q10567 949 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 ACAP1Q15027 740 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 FAM187BQ17R55 369 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 P3H1Q32P28 736 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 FAM102BQ5T8I3 360 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 LVRNQ6Q4G3 990 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 GLIS1Q8NBF1 620 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 STKLD1Q8NE28 680 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 DEPTORQ8TB45 409 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 FEZF2Q8TBJ5 459 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 LRRC39Q96DD0 335 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 ZNF184Q99676 751 aaPredicted RBP4.32□□□□□ -1.72
UBE4A-201ENST00000252108 CNTN3Q9P232 1028 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 TAGLN3Q9UI15 199 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 CPSF3Q9UKF6 684 aaKnown RBP4.32□□□□□ -1.72
UBE4A-201ENST00000252108 TMCO1Q9UM00 188 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 KCNH4Q9UQ05 1017 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 A0A0G2JND7 137 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 TMEM191CA6NGB0 347 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 TLR3O15455 904 aaKnown RBP4.32□□□□□ -1.72
UBE4A-201ENST00000252108 ASS1P00966 412 aaKnown RBP4.32□□□□□ -1.72
UBE4A-201ENST00000252108 PDHA1P08559 390 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 TMEM191BP0C7N4 346 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 NLRP11P59045 1033 aaKnown RBP4.32□□□□□ -1.72
UBE4A-201ENST00000252108 TMPRSS15P98073 1019 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 CDK16Q00536 496 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 MAMLD1Q13495 774 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 CYLC2Q14093 348 aaPredicted RBP4.32□□□□□ -1.72
UBE4A-201ENST00000252108 CTC1Q2NKJ3 1217 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 LRRC74BQ6ZQY2 392 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 ARHGAP22Q7Z5H3 698 aa4.32□□□□□ -1.72
UBE4A-201ENST00000252108 CTAGE3PQ8IX95 158 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms