RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 MYH10P35580 1976 aa11.03□□□□□ -0.64
VPS50-201ENST00000251739 TRAV19A0A0A6YYK7 116 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.02□□□□□ -0.65
VPS50-201ENST00000251739 ZNF233A6NK53 670 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 TM4SF5O14894 197 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 PPP6R2O75170 966 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 RPP40O75818 363 aaKnown RBP11.02□□□□□ -0.65
VPS50-201ENST00000251739 TNNC2P02585 160 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 PFKLP17858 780 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 GALK1P51570 392 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 LIMK1P53667 647 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 AMPD2Q01433 879 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 MYO1EQ12965 1108 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 SNRNP35Q16560 246 aaKnown RBP11.02□□□□□ -0.65
VPS50-201ENST00000251739 DUOXA2Q1HG44 320 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 FBXO43Q4G163 708 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 CC2D1AQ6P1N0 951 aaPredicted RBP11.02□□□□□ -0.65
VPS50-201ENST00000251739 STXBP4Q6ZWJ1 553 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 CEP68Q76N32 757 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 SYT13Q7L8C5 426 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 TRAPPC11Q7Z392 1133 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 KBTBD6Q86V97 674 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 KIAA1958Q8N8K9 716 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 ARL14EPQ8N8R7 260 aaPredicted RBP11.02□□□□□ -0.65
VPS50-201ENST00000251739 MYCBPAPQ8TBZ2 947 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 SH3RF2Q8TEC5 729 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 CNTNAP3BQ96NU0 1288 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 CNTNAP3Q9BZ76 1288 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 KIAA1586Q9HCI6 787 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 TRPC7Q9HCX4 862 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 AGPAT3Q9NRZ7 376 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 POLR3BQ9NW08 1133 aaPredicted RBP11.02□□□□□ -0.65
VPS50-201ENST00000251739 DUS2Q9NX74 493 aaKnown RBP11.02□□□□□ -0.65
VPS50-201ENST00000251739 WNT6Q9Y6F9 365 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 ASCC3Q8N3C0 2202 aaKnown RBP11.02□□□□□ -0.65
VPS50-201ENST00000251739 UBE4BO95155 1302 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 CFAP47Q6ZTR5 3102 aa11.02□□□□□ -0.65
VPS50-201ENST00000251739 SPTLC2O15270 562 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 TACC1O75410 805 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 YEATS4O95619 227 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 STAU1O95793 577 aaKnown RBP11.01□□□□□ -0.65
VPS50-201ENST00000251739 FAM163BP0C2L3 166 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 ZNF806P0C7X5 589 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 OPRD1P41143 372 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 IFNAR2P48551 515 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 COPS2P61201 443 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 NOP14P78316 857 aaKnown RBP11.01□□□□□ -0.65
VPS50-201ENST00000251739 CYP24A1Q07973 514 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 KCNB1Q14721 858 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 PSMD6Q15008 389 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 STK38Q15208 465 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 SF3A2Q15428 464 aaKnown RBP11.01□□□□□ -0.65
VPS50-201ENST00000251739 MAPRE1Q15691 268 aaKnown RBP11.01□□□□□ -0.65
VPS50-201ENST00000251739 BMT2Q1RMZ1 405 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 PPM1JQ5JR12 505 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 FAM26FQ5R3K3 315 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 SHC4Q6S5L8 630 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 DENND5BQ6ZUT9 1274 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 CACNA2D4Q7Z3S7 1137 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 SCN4BQ8IWT1 228 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 SCFD1Q8WVM8 642 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 CD101Q93033 1021 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 PCED1BQ96HM7 432 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 CGRRF1Q99675 332 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 C7orf25Q9BPX7 421 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 LRRC27Q9C0I9 530 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 XYLT2Q9H1B5 865 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 LINC00597Q9H2U6 94 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 EBF1Q9UH73 591 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 PCDHGA5Q9Y5G8 931 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 CACNA1EQ15878 2313 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 ZFHX4Q86UP3 3567 aa11.01□□□□□ -0.65
VPS50-201ENST00000251739 ZZEF1O43149 2961 aa11□□□□□ -0.65
VPS50-201ENST00000251739 ZNF840PA6NDX5 716 aa11□□□□□ -0.65
VPS50-201ENST00000251739 F8VP50 259 aa11□□□□□ -0.65
VPS50-201ENST00000251739 K7ELQ4 463 aaPredicted RBP11□□□□□ -0.65
VPS50-201ENST00000251739 OAS1P00973 400 aaKnown RBP11□□□□□ -0.65
VPS50-201ENST00000251739 CST3P01034 146 aaPredicted RBP11□□□□□ -0.65
VPS50-201ENST00000251739 CYP17A1P05093 508 aa11□□□□□ -0.65
VPS50-201ENST00000251739 HDCP19113 662 aa11□□□□□ -0.65
VPS50-201ENST00000251739 BDNFP23560 247 aa11□□□□□ -0.65
VPS50-201ENST00000251739 PDE6CP51160 858 aa11□□□□□ -0.65
VPS50-201ENST00000251739 CACNA2D1P54289 1103 aa11□□□□□ -0.65
VPS50-201ENST00000251739 SNRPFP62306 86 aaKnown RBP11□□□□□ -0.65
VPS50-201ENST00000251739 ASIC1P78348 528 aa11□□□□□ -0.65
VPS50-201ENST00000251739 SLC7A9P82251 487 aa11□□□□□ -0.65
VPS50-201ENST00000251739 PLK5Q496M5 336 aa11□□□□□ -0.65
VPS50-201ENST00000251739 C12orf56Q8IXR9 622 aa11□□□□□ -0.65
VPS50-201ENST00000251739 FSIP1Q8NA03 581 aa11□□□□□ -0.65
VPS50-201ENST00000251739 RPLP0P6Q8NHW5 317 aa11□□□□□ -0.65
VPS50-201ENST00000251739 NOC3LQ8WTT2 800 aaKnown RBP11□□□□□ -0.65
VPS50-201ENST00000251739 ACDQ96AP0 544 aa11□□□□□ -0.65
VPS50-201ENST00000251739 C8orf48Q96LL4 319 aa11□□□□□ -0.65
VPS50-201ENST00000251739 HHIPQ96QV1 700 aa11□□□□□ -0.65
VPS50-201ENST00000251739 MRPL45Q9BRJ2 306 aaKnown RBP11□□□□□ -0.65
VPS50-201ENST00000251739 DUSP15Q9H1R2 295 aaPredicted RBP11□□□□□ -0.65
VPS50-201ENST00000251739 ARRDC1-AS1Q9H2J1 176 aa11□□□□□ -0.65
VPS50-201ENST00000251739 MAGEF1Q9HAY2 307 aa11□□□□□ -0.65
VPS50-201ENST00000251739 RXFP3Q9NSD7 469 aa11□□□□□ -0.65
VPS50-201ENST00000251739 MAGEC2Q9UBF1 373 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms