RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 PFKMP08237 780 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 GPD2P43304 727 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 GCLCP48506 637 aaPredicted RBP10.58□□□□□ -0.72
COPB1-201ENST00000249923 PSEN1P49768 467 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 OVGP1Q12889 678 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 AMHR2Q16671 573 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 C15orf59Q2T9L4 293 aaPredicted RBP10.58□□□□□ -0.72
COPB1-201ENST00000249923 NBPF20Q3BBV1 942 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 MDH1BQ5I0G3 518 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 RIOX2Q8IUF8 465 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 PPIL6Q8IXY8 311 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 GBP7Q8N8V2 638 aaPredicted RBP10.58□□□□□ -0.72
COPB1-201ENST00000249923 TCP10LQ8TDR4 215 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 SEPT1Q8WYJ6 367 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 PPP1R16BQ96T49 567 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 MIPEPQ99797 713 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 CCDC77Q9BR77 488 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 MAGEB5Q9BZ81 275 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 LRMDAQ9H2I8 198 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 IRAK4Q9NWZ3 460 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 SCN1AP35498 2009 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 KAT6AQ92794 2004 aa10.58□□□□□ -0.72
COPB1-201ENST00000249923 EME2A4GXA9 379 aaPredicted RBP10.57□□□□□ -0.72
COPB1-201ENST00000249923 MICAL2O94851 1124 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 ENDOD1O94919 500 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 MAP3K6O95382 1288 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 CD19P15391 556 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 ETV4P43268 484 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 EFNA5P52803 228 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 SPARCL1Q14515 664 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 LRRC36Q1X8D7 754 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 ATF7IP2Q5U623 682 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 JADE1Q6IE81 842 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 CDHR3Q6ZTQ4 885 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 FNIP1Q8TF40 1166 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 HSPH1Q92598 858 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 MCRS1Q96EZ8 462 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 SMC6Q96SB8 1091 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 SPATC1LQ9H0A9 340 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 RNPEPQ9H4A4 650 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 KCNK13Q9HB14 408 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 SLC24A2Q9UI40 661 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 C2orf71A6NGG8 1288 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 E5RJQ4 531 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 CILPO75339 1184 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 TRUB2O95900 331 aaKnown RBP10.57□□□□□ -0.72
COPB1-201ENST00000249923 SKIV2L2P42285 1042 aaKnown RBP10.57□□□□□ -0.72
COPB1-201ENST00000249923 AP3M2P53677 418 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 Q3C1V9 767 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 IER5Q5VY09 327 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 FBXO16Q8IX29 292 aaPredicted RBP10.57□□□□□ -0.72
COPB1-201ENST00000249923 HIPK4Q8NE63 616 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 PDGFCQ9NRA1 345 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 NRBP2Q9NSY0 501 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 KCNG1Q9UIX4 513 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 CHMP2BQ9UQN3 213 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 C15orf41Q9Y2V0 281 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 A0A0G2JND7 137 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 TCRBV9S1A1TA0A576 114 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 LACTBL1A8MY62 500 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 ACKR2O00590 384 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 ITGB3P05106 788 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 KRT19P08727 400 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 ATP2A2P16615 1042 aaKnown RBP10.57□□□□□ -0.72
COPB1-201ENST00000249923 GABRB2P47870 512 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 TRPC3Q13507 836 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 KCNJ11Q14654 390 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 HSF5Q4G112 596 aaPredicted RBP10.57□□□□□ -0.72
COPB1-201ENST00000249923 GJC2Q5T442 439 aaPredicted RBP10.57□□□□□ -0.72
COPB1-201ENST00000249923 ZC3H18Q86VM9 953 aaKnown RBP10.57□□□□□ -0.72
COPB1-201ENST00000249923 UBA3Q8TBC4 463 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 MCUR1Q96AQ8 359 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 NUDCD1Q96RS6 583 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 NPHS2Q9NP85 383 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 XPO7Q9UIA9 1087 aaKnown RBP10.57□□□□□ -0.72
COPB1-201ENST00000249923 USP18Q9UMW8 372 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 SMG5Q9UPR3 1016 aaKnown RBP10.57□□□□□ -0.72
COPB1-201ENST00000249923 AGTPBP1Q9UPW5 1226 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 EFR3BQ9Y2G0 817 aa10.57□□□□□ -0.72
COPB1-201ENST00000249923 ZNF638Q14966 1978 aaKnown RBP10.56□□□□□ -0.72
COPB1-201ENST00000249923 PLXNA1Q9UIW2 1896 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 APOC4-APOC2K7ER74 178 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 GRAP2O75791 330 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 APOC2P02655 101 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 TFE3P19532 575 aaPredicted RBP10.56□□□□□ -0.72
COPB1-201ENST00000249923 ELK3P41970 407 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 TAP1Q03518 808 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 NR1H3Q13133 447 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 DPYSL3Q14195 570 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 APBB1IPQ7Z5R6 666 aaPredicted RBP10.56□□□□□ -0.72
COPB1-201ENST00000249923 NCAPG2Q86XI2 1143 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 LMNTD2Q8IXW0 634 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 VPS52Q8N1B4 723 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 C12orf29Q8N999 325 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 PYROXD1Q8WU10 500 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 TSC22D3Q99576 134 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 USP29Q9HBJ7 922 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 TEX264Q9Y6I9 313 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 CXorf49A8MYA2 514 aaPredicted RBP10.56□□□□□ -0.72
COPB1-201ENST00000249923 INO80B-WBP1J3KQ70 363 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms