RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 IL37Q9NZH6 218 aa13.53□□□□□ -0.24
VPREB3-201ENST00000248948 ARHGAP26Q9UNA1 814 aa13.53□□□□□ -0.24
VPREB3-201ENST00000248948 KANSL1LA0AUZ9 987 aa13.52□□□□□ -0.25
VPREB3-201ENST00000248948 ZNF840PA6NDX5 716 aa13.52□□□□□ -0.25
VPREB3-201ENST00000248948 PRKCSHP14314 528 aaPredicted RBP13.52□□□□□ -0.25
VPREB3-201ENST00000248948 YWHAQP27348 245 aa13.52□□□□□ -0.25
VPREB3-201ENST00000248948 ADORA2BP29275 332 aa13.52□□□□□ -0.25
VPREB3-201ENST00000248948 RAD23BP54727 409 aa13.52□□□□□ -0.25
VPREB3-201ENST00000248948 GCNT1Q02742 428 aa13.52□□□□□ -0.25
VPREB3-201ENST00000248948 TAF10Q12962 218 aa13.52□□□□□ -0.25
VPREB3-201ENST00000248948 SLC44A4Q53GD3 710 aa13.52□□□□□ -0.25
VPREB3-201ENST00000248948 SMYD5Q6GMV2 418 aa13.52□□□□□ -0.25
VPREB3-201ENST00000248948 KIAA1958Q8N8K9 716 aa13.52□□□□□ -0.25
VPREB3-201ENST00000248948 SLC4A11Q8NBS3 891 aa13.52□□□□□ -0.25
VPREB3-201ENST00000248948 LMO3Q8TAP4 145 aa13.52□□□□□ -0.25
VPREB3-201ENST00000248948 TATDN2Q93075 761 aa13.52□□□□□ -0.25
VPREB3-201ENST00000248948 FBXO32Q969P5 355 aa13.52□□□□□ -0.25
VPREB3-201ENST00000248948 SMG9Q9H0W8 520 aaKnown RBP13.52□□□□□ -0.25
VPREB3-201ENST00000248948 FBXO44Q9H4M3 255 aa13.52□□□□□ -0.25
VPREB3-201ENST00000248948 HEBP1Q9NRV9 189 aa13.52□□□□□ -0.25
VPREB3-201ENST00000248948 THG1LQ9NWX6 298 aaKnown RBP13.52□□□□□ -0.25
VPREB3-201ENST00000248948 GCNT4Q9P109 453 aa13.52□□□□□ -0.25
VPREB3-201ENST00000248948 MRPS17Q9Y2R5 130 aaKnown RBP13.52□□□□□ -0.25
VPREB3-201ENST00000248948 F5P12259 2224 aa13.52□□□□□ -0.25
VPREB3-201ENST00000248948 CACNA1HO95180 2353 aa13.52□□□□□ -0.25
VPREB3-201ENST00000248948 FANCMQ8IYD8 2048 aa13.51□□□□□ -0.25
VPREB3-201ENST00000248948 GTPBP10A4D1E9 387 aaKnown RBP13.51□□□□□ -0.25
VPREB3-201ENST00000248948 MAN2B1O00754 1011 aa13.51□□□□□ -0.25
VPREB3-201ENST00000248948 GALR2O43603 387 aaPredicted RBP13.51□□□□□ -0.25
VPREB3-201ENST00000248948 OAS1P00973 400 aaKnown RBP13.51□□□□□ -0.25
VPREB3-201ENST00000248948 MAGEA9P43362 315 aa13.51□□□□□ -0.25
VPREB3-201ENST00000248948 MAP3K7CLP57077 242 aa13.51□□□□□ -0.25
VPREB3-201ENST00000248948 MTF1Q14872 753 aa13.51□□□□□ -0.25
VPREB3-201ENST00000248948 ZNF77Q15935 545 aa13.51□□□□□ -0.25
VPREB3-201ENST00000248948 TPD52L1Q16890 204 aaPredicted RBP13.51□□□□□ -0.25
VPREB3-201ENST00000248948 ZNF394Q53GI3 561 aa13.51□□□□□ -0.25
VPREB3-201ENST00000248948 PPP1R26Q5T8A7 1209 aaPredicted RBP13.51□□□□□ -0.25
VPREB3-201ENST00000248948 SNX30Q5VWJ9 437 aa13.51□□□□□ -0.25
VPREB3-201ENST00000248948 ZNF852Q6ZMS4 543 aa13.51□□□□□ -0.25
VPREB3-201ENST00000248948 CCDC105Q8IYK2 499 aa13.51□□□□□ -0.25
VPREB3-201ENST00000248948 PPM1KQ8N3J5 372 aa13.51□□□□□ -0.25
VPREB3-201ENST00000248948 CSGALNACT1Q8TDX6 532 aa13.51□□□□□ -0.25
VPREB3-201ENST00000248948 JAKMIP2Q96AA8 810 aa13.51□□□□□ -0.25
VPREB3-201ENST00000248948 FAM81BQ96LP2 452 aa13.51□□□□□ -0.25
VPREB3-201ENST00000248948 CCL26Q9Y258 94 aa13.51□□□□□ -0.25
VPREB3-201ENST00000248948 PIAS3Q9Y6X2 628 aa13.51□□□□□ -0.25
VPREB3-201ENST00000248948 C2orf78A6NCI8 922 aa13.5□□□□□ -0.25
VPREB3-201ENST00000248948 HHLA1C9JL84 531 aa13.5□□□□□ -0.25
VPREB3-201ENST00000248948 BEST1O76090 585 aa13.5□□□□□ -0.25
VPREB3-201ENST00000248948 PAEPP09466 180 aa13.5□□□□□ -0.25
VPREB3-201ENST00000248948 ZDHHC11BP0C7U3 371 aa13.5□□□□□ -0.25
VPREB3-201ENST00000248948 PTPN5P54829 565 aa13.5□□□□□ -0.25
VPREB3-201ENST00000248948 SLC8A3P57103 927 aa13.5□□□□□ -0.25
VPREB3-201ENST00000248948 SLC7A9P82251 487 aa13.5□□□□□ -0.25
VPREB3-201ENST00000248948 IFRD2Q12894 506 aaPredicted RBP13.5□□□□□ -0.25
VPREB3-201ENST00000248948 LRMPQ12912 555 aa13.5□□□□□ -0.25
VPREB3-201ENST00000248948 PDGFRLQ15198 375 aa13.5□□□□□ -0.25
VPREB3-201ENST00000248948 MAN2A1Q16706 1144 aa13.5□□□□□ -0.25
VPREB3-201ENST00000248948 CCDC183Q5T5S1 534 aa13.5□□□□□ -0.25
VPREB3-201ENST00000248948 IER5LQ5T953 404 aa13.5□□□□□ -0.25
VPREB3-201ENST00000248948 ENOSF1Q7L5Y1 443 aa13.5□□□□□ -0.25
VPREB3-201ENST00000248948 DDX42Q86XP3 938 aaKnown RBP eCLIP13.5□□□□□ -0.25
VPREB3-201ENST00000248948 IRF2BP1Q8IU81 584 aa13.5□□□□□ -0.25
VPREB3-201ENST00000248948 PRSS33Q8NF86 280 aa13.5□□□□□ -0.25
VPREB3-201ENST00000248948 HEXIM2Q96MH2 286 aaKnown RBP13.5□□□□□ -0.25
VPREB3-201ENST00000248948 LRRC3BQ96PB8 259 aa13.5□□□□□ -0.25
VPREB3-201ENST00000248948 SLC22A12Q96S37 553 aa13.5□□□□□ -0.25
VPREB3-201ENST00000248948 NELL2Q99435 816 aa13.5□□□□□ -0.25
VPREB3-201ENST00000248948 DUSP16Q9BY84 665 aa13.5□□□□□ -0.25
VPREB3-201ENST00000248948 FOXQ1Q9C009 403 aa13.5□□□□□ -0.25
VPREB3-201ENST00000248948 INTS2Q9H0H0 1204 aaKnown RBP13.5□□□□□ -0.25
VPREB3-201ENST00000248948 IRF2BPLQ9H1B7 796 aa13.5□□□□□ -0.25
VPREB3-201ENST00000248948 C8orf33Q9H7E9 229 aaPredicted RBP13.5□□□□□ -0.25
VPREB3-201ENST00000248948 LTB4R2Q9NPC1 389 aa13.5□□□□□ -0.25
VPREB3-201ENST00000248948 RAPGEFL1Q9UHV5 662 aa13.5□□□□□ -0.25
VPREB3-201ENST00000248948 SIT1Q9Y3P8 196 aa13.5□□□□□ -0.25
VPREB3-201ENST00000248948 STK25O00506 426 aa13.49□□□□□ -0.25
VPREB3-201ENST00000248948 HDCP19113 662 aa13.49□□□□□ -0.25
VPREB3-201ENST00000248948 ACO1P21399 889 aaKnown RBP13.49□□□□□ -0.25
VPREB3-201ENST00000248948 MTIF2P46199 727 aaKnown RBP13.49□□□□□ -0.25
VPREB3-201ENST00000248948 BCAT1P54687 386 aa13.49□□□□□ -0.25
VPREB3-201ENST00000248948 SGO2Q562F6 1265 aa13.49□□□□□ -0.25
VPREB3-201ENST00000248948 CC2D1AQ6P1N0 951 aaPredicted RBP13.49□□□□□ -0.25
VPREB3-201ENST00000248948 GPRIN1Q7Z2K8 1008 aa13.49□□□□□ -0.25
VPREB3-201ENST00000248948 RALGPS2Q86X27 583 aaPredicted RBP13.49□□□□□ -0.25
VPREB3-201ENST00000248948 ARL14EPQ8N8R7 260 aaPredicted RBP13.49□□□□□ -0.25
VPREB3-201ENST00000248948 EHBP1Q8NDI1 1231 aa13.49□□□□□ -0.25
VPREB3-201ENST00000248948 SCAMP5Q8TAC9 235 aa13.49□□□□□ -0.25
VPREB3-201ENST00000248948 RIN3Q8TB24 985 aa13.49□□□□□ -0.25
VPREB3-201ENST00000248948 FAM83CQ9BQN1 747 aa13.49□□□□□ -0.25
VPREB3-201ENST00000248948 IER2Q9BTL4 223 aa13.49□□□□□ -0.25
VPREB3-201ENST00000248948 UBXN6Q9BZV1 441 aa13.49□□□□□ -0.25
VPREB3-201ENST00000248948 TLR8Q9NR97 1041 aaKnown RBP13.49□□□□□ -0.25
VPREB3-201ENST00000248948 GMIPQ9P107 970 aa13.49□□□□□ -0.25
VPREB3-201ENST00000248948 DLGAP2Q9P1A6 1054 aa13.49□□□□□ -0.25
VPREB3-201ENST00000248948 KIAA1257Q9ULG3 409 aa13.49□□□□□ -0.25
VPREB3-201ENST00000248948 SCML2Q9UQR0 700 aa13.49□□□□□ -0.25
VPREB3-201ENST00000248948 SHISA7A6NL88 538 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 O00370 1275 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 NCAM2O15394 837 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms