RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 PFKMP08237 780 aa16.5■□□□□ 0.23
LRFN1-201ENST00000248668 TFE3P19532 575 aaPredicted RBP16.5■□□□□ 0.23
LRFN1-201ENST00000248668 RPL22P35268 128 aaKnown RBP16.5■□□□□ 0.23
LRFN1-201ENST00000248668 GTF2A2P52657 109 aa16.5■□□□□ 0.23
LRFN1-201ENST00000248668 CCDC142Q17RM4 750 aa16.5■□□□□ 0.23
LRFN1-201ENST00000248668 BBS9Q3SYG4 887 aa16.5■□□□□ 0.23
LRFN1-201ENST00000248668 POLNQ7Z5Q5 900 aa16.5■□□□□ 0.23
LRFN1-201ENST00000248668 CLEC4CQ8WTT0 213 aa16.5■□□□□ 0.23
LRFN1-201ENST00000248668 DNAJB3Q8WWF6 145 aa16.5■□□□□ 0.23
LRFN1-201ENST00000248668 NKD2Q969F2 451 aaPredicted RBP16.5■□□□□ 0.23
LRFN1-201ENST00000248668 CENPTQ96BT3 561 aa16.5■□□□□ 0.23
LRFN1-201ENST00000248668 MCRS1Q96EZ8 462 aa16.5■□□□□ 0.23
LRFN1-201ENST00000248668 MAK16Q9BXY0 300 aaKnown RBP16.5■□□□□ 0.23
LRFN1-201ENST00000248668 CYP3A43Q9HB55 503 aa16.5■□□□□ 0.23
LRFN1-201ENST00000248668 WDR35Q9P2L0 1181 aa16.5■□□□□ 0.23
LRFN1-201ENST00000248668 CDH16O75309 829 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 HMGCRP04035 888 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 ITGAVP06756 1048 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 KRT15P19012 456 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 GPD1P21695 349 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 ATXN1P54253 815 aaKnown RBP16.49■□□□□ 0.23
LRFN1-201ENST00000248668 HIC1Q14526 733 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 PPP6R3Q5H9R7 873 aaPredicted RBP16.49■□□□□ 0.23
LRFN1-201ENST00000248668 FNBP1LQ5T0N5 605 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 FAXCQ5TGI0 409 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 NUGGCQ68CJ6 796 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 CCDC197Q8NCU1 140 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 PRCCQ92733 491 aaPredicted RBP16.49■□□□□ 0.23
LRFN1-201ENST00000248668 PCDH9Q9HC56 1237 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 CYP2C9P11712 490 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 BEX3Q00994 111 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 ZNF618Q5T7W0 954 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 BBS12Q6ZW61 710 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 ASNSD1Q9NWL6 643 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 PIN4Q9Y237 131 aaKnown RBP16.49■□□□□ 0.23
LRFN1-201ENST00000248668 DRG1Q9Y295 367 aaKnown RBP16.49■□□□□ 0.23
LRFN1-201ENST00000248668 C2CD2Q9Y426 696 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 PLXNA1Q9UIW2 1896 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 C5orf60A6NFR6 353 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 SRRM3A6NNA2 597 aaPredicted RBP16.49■□□□□ 0.23
LRFN1-201ENST00000248668 DNM1LO00429 736 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 STRNO43815 780 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 PRPSAP2O60256 369 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 RECQL4O94761 1208 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 CCDC130P13994 396 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 PEX19P40855 299 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 POU5F1BQ06416 359 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 KRT81Q14533 505 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 PKN2Q16513 984 aaKnown RBP16.49■□□□□ 0.23
LRFN1-201ENST00000248668 HIF1AQ16665 826 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 DARS2Q6PI48 645 aaKnown RBP16.49■□□□□ 0.23
LRFN1-201ENST00000248668 PLEKHH3Q7Z736 793 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 IFNLR1Q8IU57 520 aaPredicted RBP16.49■□□□□ 0.23
LRFN1-201ENST00000248668 TMEM40Q8WWA1 233 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 CPT1BQ92523 772 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 MIEF2Q96C03 454 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 RNF39Q9H2S5 420 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 SAMD15Q9P1V8 674 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 CACNG4Q9UBN1 327 aa16.49■□□□□ 0.23
LRFN1-201ENST00000248668 SMIM10L2AP0DMW4 78 aa16.48■□□□□ 0.23
LRFN1-201ENST00000248668 SMIM10L2BP0DMW5 78 aa16.48■□□□□ 0.23
LRFN1-201ENST00000248668 STX2P32856 288 aa16.48■□□□□ 0.23
LRFN1-201ENST00000248668 DRICH1Q6PGQ1 229 aaPredicted RBP16.48■□□□□ 0.23
LRFN1-201ENST00000248668 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.48■□□□□ 0.23
LRFN1-201ENST00000248668 ABHD16BQ9H3Z7 469 aa16.48■□□□□ 0.23
LRFN1-201ENST00000248668 H7C0C1 242 aa16.48■□□□□ 0.23
LRFN1-201ENST00000248668 MCF2LO15068 1137 aa16.48■□□□□ 0.23
LRFN1-201ENST00000248668 TMEM63AO94886 807 aa16.48■□□□□ 0.23
LRFN1-201ENST00000248668 CELF2O95319 508 aaKnown RBP16.48■□□□□ 0.23
LRFN1-201ENST00000248668 GCAP28676 217 aa16.48■□□□□ 0.23
LRFN1-201ENST00000248668 GRM5P41594 1212 aa16.48■□□□□ 0.23
LRFN1-201ENST00000248668 ATP5OP48047 213 aa16.48■□□□□ 0.23
LRFN1-201ENST00000248668 ZNF143P52747 638 aaPredicted RBP16.48■□□□□ 0.23
LRFN1-201ENST00000248668 STAT4Q14765 748 aa16.48■□□□□ 0.23
LRFN1-201ENST00000248668 MORF4L2Q15014 288 aa16.48■□□□□ 0.23
LRFN1-201ENST00000248668 CA9Q16790 459 aa16.48■□□□□ 0.23
LRFN1-201ENST00000248668 FAM47EQ6ZV65 393 aa16.48■□□□□ 0.23
LRFN1-201ENST00000248668 CENPUQ71F23 418 aa16.48■□□□□ 0.23
LRFN1-201ENST00000248668 SPATS2Q86XZ4 545 aaKnown RBP16.48■□□□□ 0.23
LRFN1-201ENST00000248668 CCHCR1Q8TD31 782 aa16.48■□□□□ 0.23
LRFN1-201ENST00000248668 FNIP1Q8TF40 1166 aa16.48■□□□□ 0.23
LRFN1-201ENST00000248668 GCOM2Q9BZD3 368 aaPredicted RBP16.48■□□□□ 0.23
LRFN1-201ENST00000248668 RBM47A0AV96 593 aaKnown RBP16.47■□□□□ 0.23
LRFN1-201ENST00000248668 C2CD4BA6NLJ0 364 aa16.47■□□□□ 0.23
LRFN1-201ENST00000248668 A8MXQ7 604 aa16.47■□□□□ 0.23
LRFN1-201ENST00000248668 ATP5DP30049 168 aa16.47■□□□□ 0.23
LRFN1-201ENST00000248668 GRB14Q14449 540 aa16.47■□□□□ 0.23
LRFN1-201ENST00000248668 CCL14Q16627 93 aa16.47■□□□□ 0.23
LRFN1-201ENST00000248668 NETO2Q8NC67 525 aa16.47■□□□□ 0.23
LRFN1-201ENST00000248668 FAM172AQ8WUF8 416 aa16.47■□□□□ 0.23
LRFN1-201ENST00000248668 F5H423 210 aaPredicted RBP16.47■□□□□ 0.23
LRFN1-201ENST00000248668 LCP1P13796 627 aa16.47■□□□□ 0.23
LRFN1-201ENST00000248668 LMO2P25791 158 aa16.47■□□□□ 0.23
LRFN1-201ENST00000248668 INCA1Q0VD86 236 aa16.47■□□□□ 0.23
LRFN1-201ENST00000248668 FAM133BQ5BKY9 247 aaKnown RBP16.47■□□□□ 0.23
LRFN1-201ENST00000248668 LCLAT1Q6UWP7 414 aa16.47■□□□□ 0.23
LRFN1-201ENST00000248668 NDRG1Q92597 394 aaKnown RBP16.47■□□□□ 0.23
LRFN1-201ENST00000248668 KLF6Q99612 283 aaPredicted RBP16.47■□□□□ 0.23
LRFN1-201ENST00000248668 CNPY3Q9BT09 278 aa16.47■□□□□ 0.23
LRFN1-201ENST00000248668 ADAMTS10Q9H324 1103 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms