RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 CLEC4DQ8WXI8 215 aa16.4■□□□□ 0.22
SIN3B-201ENST00000248054 EIF2AQ9BY44 585 aaKnown RBP16.4■□□□□ 0.22
SIN3B-201ENST00000248054 PRDM16Q9HAZ2 1276 aa16.4■□□□□ 0.22
SIN3B-201ENST00000248054 KLK14Q9P0G3 267 aa16.4■□□□□ 0.22
SIN3B-201ENST00000248054 DLGAP2Q9P1A6 1054 aa16.4■□□□□ 0.22
SIN3B-201ENST00000248054 CICQ96RK0 1608 aaPredicted RBP16.4■□□□□ 0.22
SIN3B-201ENST00000248054 SHOX2O60902 331 aaPredicted RBP16.4■□□□□ 0.22
SIN3B-201ENST00000248054 ADRB2P07550 413 aa16.4■□□□□ 0.22
SIN3B-201ENST00000248054 HSD17B3P37058 310 aa16.4■□□□□ 0.22
SIN3B-201ENST00000248054 ADCYAP1R1P41586 468 aa16.4■□□□□ 0.22
SIN3B-201ENST00000248054 RECQLP46063 649 aaPredicted RBP16.4■□□□□ 0.22
SIN3B-201ENST00000248054 TSEN2Q8NCE0 465 aaKnown RBP16.4■□□□□ 0.22
SIN3B-201ENST00000248054 CHN1P15882 459 aa16.4■□□□□ 0.22
SIN3B-201ENST00000248054 PHEXP78562 749 aa16.4■□□□□ 0.22
SIN3B-201ENST00000248054 GLRA4Q5JXX5 417 aa16.4■□□□□ 0.22
SIN3B-201ENST00000248054 ANKRD23Q86SG2 305 aa16.4■□□□□ 0.22
SIN3B-201ENST00000248054 FAM210AQ96ND0 272 aa16.4■□□□□ 0.22
SIN3B-201ENST00000248054 DFFAO00273 331 aa16.4■□□□□ 0.22
SIN3B-201ENST00000248054 GSTA4O15217 222 aa16.4■□□□□ 0.22
SIN3B-201ENST00000248054 USP2O75604 605 aaPredicted RBP16.4■□□□□ 0.22
SIN3B-201ENST00000248054 PECAM1P16284 738 aaPredicted RBP16.4■□□□□ 0.22
SIN3B-201ENST00000248054 ZNF200P98182 395 aaPredicted RBP16.4■□□□□ 0.22
SIN3B-201ENST00000248054 TRIML2Q8N7C3 387 aa16.4■□□□□ 0.22
SIN3B-201ENST00000248054 BTBD6Q96KE9 485 aa16.4■□□□□ 0.22
SIN3B-201ENST00000248054 KANSL3Q9P2N6 904 aa16.4■□□□□ 0.22
SIN3B-201ENST00000248054 FZD1Q9UP38 647 aa16.4■□□□□ 0.22
SIN3B-201ENST00000248054 LACTBL1A8MY62 500 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 FARP2O94887 1054 aaPredicted RBP16.39■□□□□ 0.21
SIN3B-201ENST00000248054 MYCP01106 439 aaPredicted RBP16.39■□□□□ 0.21
SIN3B-201ENST00000248054 CAPSQ13938 189 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 MORF4L2Q15014 288 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 C1orf146Q5VVC0 180 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 MCUQ8NE86 351 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 MDM1Q8TC05 714 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 MTIF3Q9H2K0 278 aaKnown RBP16.39■□□□□ 0.21
SIN3B-201ENST00000248054 FZD9O00144 591 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 OR1G1P47890 313 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 SMTNL2Q2TAL5 461 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 RNF219Q5W0B1 726 aaPredicted RBP16.39■□□□□ 0.21
SIN3B-201ENST00000248054 DDX42Q86XP3 938 aaKnown RBP eCLIP16.39■□□□□ 0.21
SIN3B-201ENST00000248054 ACO2Q99798 780 aaKnown RBP16.39■□□□□ 0.21
SIN3B-201ENST00000248054 PRMT1Q99873 361 aaKnown RBP16.39■□□□□ 0.21
SIN3B-201ENST00000248054 KDM4CQ9H3R0 1056 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 TRPV2Q9Y5S1 764 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 C4BP0C0L5 1744 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 NWD2Q9ULI1 1742 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 CABYRO75952 493 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 MAPRE2Q15555 327 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 FSCN1Q16658 493 aaKnown RBP16.39■□□□□ 0.21
SIN3B-201ENST00000248054 UNC93AQ86WB7 457 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 TFB1MQ8WVM0 346 aaKnown RBP16.39■□□□□ 0.21
SIN3B-201ENST00000248054 WNK4Q96J92 1243 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 NIFKQ9BYG3 293 aaKnown RBP16.39■□□□□ 0.21
SIN3B-201ENST00000248054 VPS11Q9H270 941 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 MLXIPLQ9NP71 852 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 SNTG2Q9NY99 539 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 USP15Q9Y4E8 981 aaPredicted RBP16.39■□□□□ 0.21
SIN3B-201ENST00000248054 RBAK-RBAKDNI3L0D1 243 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 NCAM1P13591 858 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 ELF3P78545 371 aaPredicted RBP16.39■□□□□ 0.21
SIN3B-201ENST00000248054 LRRC14Q15048 493 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 ZACNQ401N2 412 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 SPDYCQ5MJ68 293 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 SUN2Q9UH99 717 aa16.39■□□□□ 0.21
SIN3B-201ENST00000248054 CHORDC1Q9UHD1 332 aaPredicted RBP16.39■□□□□ 0.21
SIN3B-201ENST00000248054 GLTPD2A6NH11 291 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 ANKMY2Q8IV38 441 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 ZBTB45Q96K62 511 aaPredicted RBP16.38■□□□□ 0.21
SIN3B-201ENST00000248054 C9orf72Q96LT7 481 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 USP18Q9UMW8 372 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 CYP1A2P05177 515 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 KCNA2P16389 499 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 TYK2P29597 1187 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 ELAVL2Q12926 359 aaKnown RBP16.38■□□□□ 0.21
SIN3B-201ENST00000248054 MAP2K5Q13163 448 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 UGCGQ16739 394 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 ZCWPW2Q504Y3 356 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 TRIM67Q6ZTA4 783 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 TRAPPC12Q8WVT3 735 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 DNAJB3Q8WWF6 145 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 SLITRK1Q96PX8 696 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 ARHGAP10A1A4S6 786 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 FAM47DPA6NHR8 397 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 B3GAT3O94766 335 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 PRAMEP78395 509 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 TREML2Q5T2D2 321 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 NUDCD3Q8IVD9 361 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 LSM7Q9UK45 103 aaKnown RBP16.38■□□□□ 0.21
SIN3B-201ENST00000248054 C2CD2Q9Y426 696 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 UBR2Q8IWV8 1755 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 PLCH1Q4KWH8 1693 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 NQO1P15559 274 aaKnown RBP16.38■□□□□ 0.21
SIN3B-201ENST00000248054 RAD51Q06609 339 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 MTA1Q13330 715 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 GPR142Q7Z601 462 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 LINC00523Q86TU6 105 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 CREG2Q8IUH2 290 aa16.38■□□□□ 0.21
SIN3B-201ENST00000248054 COL2A1P02458 1487 aaPredicted RBP16.38■□□□□ 0.21
SIN3B-201ENST00000248054 UNCXA6NJT0 531 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 DLG4P78352 724 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms