RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 LRRC4Q9HBW1 653 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 ARFGAP3Q9NP61 516 aa14.9□□□□□ -0.02
SDF2-201ENST00000247020 COL4A4P53420 1690 aaPredicted RBP14.89□□□□□ -0.03
SDF2-201ENST00000247020 ABHD14A-ACY1A0A1B0GW23 586 aa14.89□□□□□ -0.03
SDF2-201ENST00000247020 FAM187AA6NFU0 413 aa14.89□□□□□ -0.03
SDF2-201ENST00000247020 BHMG1C9JSJ3 638 aaPredicted RBP14.89□□□□□ -0.03
SDF2-201ENST00000247020 I3L4J1 428 aa14.89□□□□□ -0.03
SDF2-201ENST00000247020 NRP1O14786 923 aa14.89□□□□□ -0.03
SDF2-201ENST00000247020 HSF2BPO75031 334 aa14.89□□□□□ -0.03
SDF2-201ENST00000247020 TADA2AO75478 443 aa14.89□□□□□ -0.03
SDF2-201ENST00000247020 AP1G2O75843 785 aa14.89□□□□□ -0.03
SDF2-201ENST00000247020 ALDH2P05091 517 aa14.89□□□□□ -0.03
SDF2-201ENST00000247020 FLT3P36888 993 aa14.89□□□□□ -0.03
SDF2-201ENST00000247020 KLF1Q13351 362 aaPredicted RBP14.89□□□□□ -0.03
SDF2-201ENST00000247020 SMC1AQ14683 1233 aaKnown RBP14.89□□□□□ -0.03
SDF2-201ENST00000247020 SIX1Q15475 284 aaPredicted RBP14.89□□□□□ -0.03
SDF2-201ENST00000247020 ODF2Q5BJF6 829 aa14.89□□□□□ -0.03
SDF2-201ENST00000247020 VSIG1Q86XK7 387 aa14.89□□□□□ -0.03
SDF2-201ENST00000247020 KLHL7Q8IXQ5 586 aa14.89□□□□□ -0.03
SDF2-201ENST00000247020 IFT20Q8IY31 132 aa14.89□□□□□ -0.03
SDF2-201ENST00000247020 DCP1BQ8IZD4 617 aaKnown RBP14.89□□□□□ -0.03
SDF2-201ENST00000247020 HASPINQ8TF76 798 aa14.89□□□□□ -0.03
SDF2-201ENST00000247020 MYLPFQ96A32 169 aa14.89□□□□□ -0.03
SDF2-201ENST00000247020 PAWRQ96IZ0 340 aaKnown RBP14.89□□□□□ -0.03
SDF2-201ENST00000247020 SLITRK1Q96PX8 696 aa14.89□□□□□ -0.03
SDF2-201ENST00000247020 TBCBQ99426 244 aa14.89□□□□□ -0.03
SDF2-201ENST00000247020 LRRC19Q9H756 370 aa14.89□□□□□ -0.03
SDF2-201ENST00000247020 CNGB3Q9NQW8 809 aa14.89□□□□□ -0.03
SDF2-201ENST00000247020 GDF3Q9NR23 364 aa14.89□□□□□ -0.03
SDF2-201ENST00000247020 DNAJB4Q9UDY4 337 aa14.89□□□□□ -0.03
SDF2-201ENST00000247020 PCYOX1Q9UHG3 505 aa14.89□□□□□ -0.03
SDF2-201ENST00000247020 DMGDHQ9UI17 866 aaKnown RBP14.89□□□□□ -0.03
SDF2-201ENST00000247020 USP18Q9UMW8 372 aa14.89□□□□□ -0.03
SDF2-201ENST00000247020 CLDN5O00501 218 aa14.88□□□□□ -0.03
SDF2-201ENST00000247020 KIAA0355O15063 1070 aa14.88□□□□□ -0.03
SDF2-201ENST00000247020 RAD51CO43502 376 aa14.88□□□□□ -0.03
SDF2-201ENST00000247020 DAB1O75553 588 aa14.88□□□□□ -0.03
SDF2-201ENST00000247020 HEXIM1O94992 359 aaKnown RBP14.88□□□□□ -0.03
SDF2-201ENST00000247020 TIMP1P01033 207 aa14.88□□□□□ -0.03
SDF2-201ENST00000247020 KRT1P04264 644 aa14.88□□□□□ -0.03
SDF2-201ENST00000247020 LCP1P13796 627 aa14.88□□□□□ -0.03
SDF2-201ENST00000247020 MRPS5P82675 430 aaKnown RBP14.88□□□□□ -0.03
SDF2-201ENST00000247020 LRRC26Q2I0M4 334 aa14.88□□□□□ -0.03
SDF2-201ENST00000247020 AADACL2Q6P093 401 aa14.88□□□□□ -0.03
SDF2-201ENST00000247020 CCDC50Q8IVM0 306 aa14.88□□□□□ -0.03
SDF2-201ENST00000247020 SIX6OS1Q8N1H7 587 aa14.88□□□□□ -0.03
SDF2-201ENST00000247020 ARFGAP1Q8N6T3 406 aa14.88□□□□□ -0.03
SDF2-201ENST00000247020 PRELID2Q8N945 189 aa14.88□□□□□ -0.03
SDF2-201ENST00000247020 TEKT4Q8WW24 435 aa14.88□□□□□ -0.03
SDF2-201ENST00000247020 FUBP3Q96I24 572 aaKnown RBP eCLIP14.88□□□□□ -0.03
SDF2-201ENST00000247020 PIWIL1Q96J94 861 aaKnown RBP14.88□□□□□ -0.03
SDF2-201ENST00000247020 SMOQ99835 787 aa14.88□□□□□ -0.03
SDF2-201ENST00000247020 C11orf84Q9BUA3 381 aaPredicted RBP14.88□□□□□ -0.03
SDF2-201ENST00000247020 DDX23Q9BUQ8 820 aaKnown RBP14.88□□□□□ -0.03
SDF2-201ENST00000247020 OSBPL8Q9BZF1 889 aa14.88□□□□□ -0.03
SDF2-201ENST00000247020 DDX47Q9H0S4 455 aaKnown RBP14.88□□□□□ -0.03
SDF2-201ENST00000247020 DMAP1Q9NPF5 467 aaPredicted RBP14.88□□□□□ -0.03
SDF2-201ENST00000247020 FAN1Q9Y2M0 1017 aa14.88□□□□□ -0.03
SDF2-201ENST00000247020 SF3B1O75533 1304 aaKnown RBP eCLIP14.88□□□□□ -0.03
SDF2-201ENST00000247020 PIK3R2O00459 728 aa14.87□□□□□ -0.03
SDF2-201ENST00000247020 TRUB2O95900 331 aaKnown RBP14.87□□□□□ -0.03
SDF2-201ENST00000247020 MIPP30301 263 aa14.87□□□□□ -0.03
SDF2-201ENST00000247020 MAP3K7CLP57077 242 aa14.87□□□□□ -0.03
SDF2-201ENST00000247020 ADCY1Q08828 1119 aa14.87□□□□□ -0.03
SDF2-201ENST00000247020 ADIGQ0VDE8 80 aa14.87□□□□□ -0.03
SDF2-201ENST00000247020 MRPL58Q14197 206 aaKnown RBP14.87□□□□□ -0.03
SDF2-201ENST00000247020 NFE2Q16621 373 aaPredicted RBP14.87□□□□□ -0.03
SDF2-201ENST00000247020 CCDC14Q49A88 953 aa14.87□□□□□ -0.03
SDF2-201ENST00000247020 BOLA3Q53S33 107 aa14.87□□□□□ -0.03
SDF2-201ENST00000247020 TFDP3Q5H9I0 405 aa14.87□□□□□ -0.03
SDF2-201ENST00000247020 DAB2IPQ5VWQ8 1189 aa14.87□□□□□ -0.03
SDF2-201ENST00000247020 TRNP1Q6NT89 227 aa14.87□□□□□ -0.03
SDF2-201ENST00000247020 CCNI2Q6ZMN8 369 aaPredicted RBP14.87□□□□□ -0.03
SDF2-201ENST00000247020 STRADAQ7RTN6 431 aa14.87□□□□□ -0.03
SDF2-201ENST00000247020 DEFB128Q7Z7B8 93 aa14.87□□□□□ -0.03
SDF2-201ENST00000247020 ZMIZ2Q8NF64 920 aa14.87□□□□□ -0.03
SDF2-201ENST00000247020 CMASQ8NFW8 434 aaPredicted RBP14.87□□□□□ -0.03
SDF2-201ENST00000247020 OR10T2Q8NGX3 314 aa14.87□□□□□ -0.03
SDF2-201ENST00000247020 IRGQQ8WZA9 623 aa14.87□□□□□ -0.03
SDF2-201ENST00000247020 CENPIQ92674 756 aaPredicted RBP14.87□□□□□ -0.03
SDF2-201ENST00000247020 SLCO2A1Q92959 643 aa14.87□□□□□ -0.03
SDF2-201ENST00000247020 ZCWPW1Q9H0M4 648 aa14.87□□□□□ -0.03
SDF2-201ENST00000247020 RAB17Q9H0T7 212 aa14.87□□□□□ -0.03
SDF2-201ENST00000247020 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.87□□□□□ -0.03
SDF2-201ENST00000247020 FEZ2Q9UHY8 353 aaPredicted RBP14.87□□□□□ -0.03
SDF2-201ENST00000247020 RASAL2Q9UJF2 1139 aa14.87□□□□□ -0.03
SDF2-201ENST00000247020 PRG3Q9Y2Y8 225 aaPredicted RBP14.87□□□□□ -0.03
SDF2-201ENST00000247020 OR6C75A6NL08 312 aa14.86□□□□□ -0.03
SDF2-201ENST00000247020 TBKBP1A7MCY6 615 aa14.86□□□□□ -0.03
SDF2-201ENST00000247020 ZNF487B1APH4 448 aa14.86□□□□□ -0.03
SDF2-201ENST00000247020 HHLA1C9JL84 531 aa14.86□□□□□ -0.03
SDF2-201ENST00000247020 BEST1O76090 585 aa14.86□□□□□ -0.03
SDF2-201ENST00000247020 TJP3O95049 919 aa14.86□□□□□ -0.03
SDF2-201ENST00000247020 RARAP10276 462 aa14.86□□□□□ -0.03
SDF2-201ENST00000247020 RALAP11233 206 aa14.86□□□□□ -0.03
SDF2-201ENST00000247020 TCF4P15884 667 aa14.86□□□□□ -0.03
SDF2-201ENST00000247020 FGFR3P22607 806 aa14.86□□□□□ -0.03
SDF2-201ENST00000247020 MATKP42679 507 aa14.86□□□□□ -0.03
SDF2-201ENST00000247020 TKTL1P51854 596 aa14.86□□□□□ -0.03
SDF2-201ENST00000247020 SMARCB1Q12824 385 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms