RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 EPAS1Q99814 870 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 HAUS8Q9BT25 410 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 STARD13Q9Y3M8 1113 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 COL14A1Q05707 1796 aaKnown RBP12.01□□□□□ -0.49
SOX9-201ENST00000245479 IRF6O14896 467 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 XPO1O14980 1071 aaKnown RBP12.01□□□□□ -0.49
SOX9-201ENST00000245479 KRT38O76015 456 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 GLRA2P23416 452 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 ABCG1P45844 678 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 TMED10P49755 219 aaKnown RBP12.01□□□□□ -0.49
SOX9-201ENST00000245479 SGSM1Q2NKQ1 1148 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 TLDC1Q6P9B6 456 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 POTEAQ6S8J7 498 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 LPAR1Q92633 364 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 ZNF75CPQ92670 426 aaPredicted RBP12.01□□□□□ -0.49
SOX9-201ENST00000245479 ANKRD36BP1Q96IX9 119 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 CATSPER2Q96P56 530 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 ADPGKQ9BRR6 497 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 NKX1-2Q9UD57 310 aaPredicted RBP12.01□□□□□ -0.49
SOX9-201ENST00000245479 FIS1Q9Y3D6 152 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 H0YGN5 161 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 PGM3O95394 542 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 OATP04181 439 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 NT5C2P49902 561 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 EFTUD2Q15029 972 aaKnown RBP eCLIP12.01□□□□□ -0.493e-7■■□□□ 12.4
SOX9-201ENST00000245479 C15orf59Q2T9L4 293 aaPredicted RBP12.01□□□□□ -0.49
SOX9-201ENST00000245479 TRMT5Q32P41 509 aaKnown RBP12.01□□□□□ -0.49
SOX9-201ENST00000245479 SLC45A4Q5BKX6 768 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 C4orf19Q8IY42 314 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 CYP4X1Q8N118 509 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 CDKL2Q92772 493 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 RNF34Q969K3 372 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 ITFG2Q969R8 447 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 CNBD2Q96M20 576 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 GPR88Q9GZN0 384 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 NFS1Q9Y697 457 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 C2orf71A6NGG8 1288 aa12□□□□□ -0.49
SOX9-201ENST00000245479 PIK3CDO00329 1044 aa12□□□□□ -0.49
SOX9-201ENST00000245479 FCHO1O14526 889 aa12□□□□□ -0.49
SOX9-201ENST00000245479 LINGO3P0C6S8 592 aa12□□□□□ -0.49
SOX9-201ENST00000245479 EEF1B2P24534 225 aaKnown RBP12□□□□□ -0.49
SOX9-201ENST00000245479 GPC3P51654 580 aa12□□□□□ -0.49
SOX9-201ENST00000245479 ADARP55265 1226 aaKnown RBP12□□□□□ -0.49
SOX9-201ENST00000245479 DUOXA2Q1HG44 320 aa12□□□□□ -0.49
SOX9-201ENST00000245479 SLC39A4Q6P5W5 647 aa12□□□□□ -0.49
SOX9-201ENST00000245479 PCGF5Q86SE9 256 aa12□□□□□ -0.49
SOX9-201ENST00000245479 HELQQ8TDG4 1101 aa12□□□□□ -0.49
SOX9-201ENST00000245479 SYT15Q9BQS2 421 aa12□□□□□ -0.49
SOX9-201ENST00000245479 APOBEC3GQ9HC16 384 aaKnown RBP12□□□□□ -0.49
SOX9-201ENST00000245479 SAR1AQ9NR31 198 aa12□□□□□ -0.49
SOX9-201ENST00000245479 ATXN10Q9UBB4 475 aa12□□□□□ -0.49
SOX9-201ENST00000245479 DTNAQ9Y4J8 743 aa12□□□□□ -0.49
SOX9-201ENST00000245479 A0A087WZ62 844 aa12□□□□□ -0.49
SOX9-201ENST00000245479 APOEP02649 317 aa12□□□□□ -0.49
SOX9-201ENST00000245479 CD48P09326 243 aa12□□□□□ -0.49
SOX9-201ENST00000245479 ADRA1DP25100 572 aa12□□□□□ -0.49
SOX9-201ENST00000245479 MARSP56192 900 aaKnown RBP12□□□□□ -0.49
SOX9-201ENST00000245479 GEMIN4P57678 1058 aaKnown RBP12□□□□□ -0.49
SOX9-201ENST00000245479 PTK7Q13308 1070 aa12□□□□□ -0.49
SOX9-201ENST00000245479 FAM71AQ8IYT1 594 aa12□□□□□ -0.49
SOX9-201ENST00000245479 NLGN2Q8NFZ4 835 aa12□□□□□ -0.49
SOX9-201ENST00000245479 ACTL9Q8TC94 416 aa12□□□□□ -0.49
SOX9-201ENST00000245479 FAF2Q96CS3 445 aa12□□□□□ -0.49
SOX9-201ENST00000245479 FDXACB1Q9BRP7 624 aaPredicted RBP12□□□□□ -0.49
SOX9-201ENST00000245479 FOXP3Q9BZS1 431 aa12□□□□□ -0.49
SOX9-201ENST00000245479 CACNG4Q9UBN1 327 aa12□□□□□ -0.49
SOX9-201ENST00000245479 ZMYND8Q9ULU4 1186 aaPredicted RBP12□□□□□ -0.49
SOX9-201ENST00000245479 UBIAD1Q9Y5Z9 338 aa12□□□□□ -0.49
SOX9-201ENST00000245479 ADAMTS7Q9UKP4 1686 aa12□□□□□ -0.49
SOX9-201ENST00000245479 LAMA3Q16787 3333 aa12□□□□□ -0.49
SOX9-201ENST00000245479 RPA3P35244 121 aaPredicted RBP12□□□□□ -0.49
SOX9-201ENST00000245479 PTGER2P43116 358 aa12□□□□□ -0.49
SOX9-201ENST00000245479 CLEC16AQ2KHT3 1053 aa12□□□□□ -0.49
SOX9-201ENST00000245479 KHDC1Q4VXA5 237 aaKnown RBP12□□□□□ -0.49
SOX9-201ENST00000245479 SH3PXD2AQ5TCZ1 1133 aa12□□□□□ -0.49
SOX9-201ENST00000245479 MARK2Q7KZI7 788 aaKnown RBP12□□□□□ -0.49
SOX9-201ENST00000245479 PDZD8Q8NEN9 1154 aa12□□□□□ -0.49
SOX9-201ENST00000245479 CCT7Q99832 543 aa12□□□□□ -0.49
SOX9-201ENST00000245479 MMADHCQ9H3L0 296 aaPredicted RBP12□□□□□ -0.49
SOX9-201ENST00000245479 BTBD7Q9P203 1132 aa12□□□□□ -0.49
SOX9-201ENST00000245479 TSC22D4Q9Y3Q8 395 aa12□□□□□ -0.49
SOX9-201ENST00000245479 BTNL10A8MVZ5 291 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 MCF2P10911 925 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 ZFXP17010 805 aaPredicted RBP11.99□□□□□ -0.49
SOX9-201ENST00000245479 TAC1P20366 129 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 POLR2BP30876 1174 aaKnown RBP11.99□□□□□ -0.49
SOX9-201ENST00000245479 SCNN1BP51168 640 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 CRADDP78560 199 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 NME3Q13232 169 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 BMPR2Q13873 1038 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 ACOT1Q86TX2 421 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 NDRG1Q92597 394 aaKnown RBP11.99□□□□□ -0.49
SOX9-201ENST00000245479 EFHD1Q9BUP0 239 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 TRPV6Q9H1D0 765 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 ASCC2Q9H1I8 757 aaPredicted RBP11.99□□□□□ -0.49
SOX9-201ENST00000245479 DHX35Q9H5Z1 703 aaKnown RBP11.99□□□□□ -0.49
SOX9-201ENST00000245479 PIDD1Q9HB75 910 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 PHLPP1O60346 1717 aa11.99□□□□□ -0.49
SOX9-201ENST00000245479 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.99□□□□□ -0.49
SOX9-201ENST00000245479 EXTL3O43909 919 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms