RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 ARID3BQ8IVW6 561 aaPredicted RBP16.19■□□□□ 0.18
DDX55-201ENST00000238146 ULK2Q8IYT8 1036 aa16.19■□□□□ 0.18
DDX55-201ENST00000238146 C7orf26Q96N11 449 aa16.19■□□□□ 0.18
DDX55-201ENST00000238146 ZNF395Q9H8N7 513 aaPredicted RBP16.19■□□□□ 0.18
DDX55-201ENST00000238146 MAP3K20Q9NYL2 800 aaKnown RBP16.19■□□□□ 0.18
DDX55-201ENST00000238146 SLC7A8Q9UHI5 535 aa16.19■□□□□ 0.18
DDX55-201ENST00000238146 COL11A2P13942 1736 aaPredicted RBP16.18■□□□□ 0.18
DDX55-201ENST00000238146 TRIM49D1C9J1S8 452 aa16.18■□□□□ 0.18
DDX55-201ENST00000238146 KRT7P08729 469 aa16.18■□□□□ 0.18
DDX55-201ENST00000238146 EIF3EP60228 445 aaKnown RBP16.18■□□□□ 0.18
DDX55-201ENST00000238146 SYCP2LQ5T4T6 812 aa16.18■□□□□ 0.18
DDX55-201ENST00000238146 ARHGEF16Q5VV41 709 aa16.18■□□□□ 0.18
DDX55-201ENST00000238146 JOSD2Q8TAC2 188 aa16.18■□□□□ 0.18
DDX55-201ENST00000238146 TFAP2BQ92481 460 aa16.18■□□□□ 0.18
DDX55-201ENST00000238146 THTPAQ9BU02 230 aa16.18■□□□□ 0.18
DDX55-201ENST00000238146 MSTO1Q9BUK6 570 aa16.18■□□□□ 0.18
DDX55-201ENST00000238146 TARS2Q9BW92 718 aaKnown RBP16.18■□□□□ 0.18
DDX55-201ENST00000238146 ZNF341Q9BYN7 854 aa16.18■□□□□ 0.18
DDX55-201ENST00000238146 ZNF518BQ9C0D4 1074 aa16.18■□□□□ 0.18
DDX55-201ENST00000238146 IQCGQ9H095 443 aaKnown RBP16.18■□□□□ 0.18
DDX55-201ENST00000238146 SLC38A10Q9HBR0 1119 aa16.18■□□□□ 0.18
DDX55-201ENST00000238146 DCAF8L1A6NGE4 600 aa16.18■□□□□ 0.18
DDX55-201ENST00000238146 I3L4J1 428 aa16.18■□□□□ 0.18
DDX55-201ENST00000238146 ITGBL1O95965 494 aaPredicted RBP16.18■□□□□ 0.18
DDX55-201ENST00000238146 C1QAP02745 245 aa16.18■□□□□ 0.18
DDX55-201ENST00000238146 RBP3P10745 1247 aa16.18■□□□□ 0.18
DDX55-201ENST00000238146 PRKCEQ02156 737 aa16.18■□□□□ 0.18
DDX55-201ENST00000238146 DSG1Q02413 1049 aa16.18■□□□□ 0.18
DDX55-201ENST00000238146 SP4Q02446 784 aa16.18■□□□□ 0.18
DDX55-201ENST00000238146 CCDC60Q8IWA6 550 aaPredicted RBP16.18■□□□□ 0.18
DDX55-201ENST00000238146 THNSL1Q8IYQ7 743 aa16.18■□□□□ 0.18
DDX55-201ENST00000238146 TAGLN3Q9UI15 199 aa16.18■□□□□ 0.18
DDX55-201ENST00000238146 PPME1Q9Y570 386 aa16.18■□□□□ 0.18
DDX55-201ENST00000238146 YDJCA8MPS7 323 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 AVILO75366 819 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 STAM2O75886 525 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 ASS1P00966 412 aaKnown RBP16.17■□□□□ 0.18
DDX55-201ENST00000238146 EIF4BP23588 611 aaKnown RBP16.17■□□□□ 0.18
DDX55-201ENST00000238146 CDH5P33151 784 aaPredicted RBP16.17■□□□□ 0.18
DDX55-201ENST00000238146 TMPRSS15P98073 1019 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 MTERF2Q49AM1 385 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 FAM182AQ5T1J6 154 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 SLC26A11Q86WA9 606 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 NLGN1Q8N2Q7 840 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 ACAP3Q96P50 834 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 TUBGCP5Q96RT8 1024 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 TTC1Q99614 292 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 ECSITQ9BQ95 431 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 IMPG2Q9BZV3 1241 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 TMEM39BQ9GZU3 492 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 PCMTD2Q9NV79 361 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 TJP2Q9UDY2 1190 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 PLLPQ9Y342 182 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 A0A0B4J269 797 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 SPECC1L-ADORA2AF8WAN1 911 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 CIB2O75838 187 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 RNF8O76064 485 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 LDHAP00338 332 aaKnown RBP16.17■□□□□ 0.18
DDX55-201ENST00000238146 WEE2P0C1S8 567 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 CRABP2P29373 138 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 ABCD1P33897 745 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 C6orf163Q5TEZ5 329 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 TTC39BQ5VTQ0 682 aaPredicted RBP16.17■□□□□ 0.18
DDX55-201ENST00000238146 SLFN12LQ6IEE8 588 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 RFX6Q8HWS3 928 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 AZIN2Q96A70 460 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 TMEM143Q96AN5 459 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 E2F7Q96AV8 911 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 CISHQ9NSE2 258 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 NDE1Q9NXR1 346 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 FBXO40Q9UH90 709 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 PPM1HQ9ULR3 514 aa16.17■□□□□ 0.18
DDX55-201ENST00000238146 APOC4-APOC2K7ER74 178 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 DKC1O60832 514 aaKnown RBP eCLIP16.16■□□□□ 0.185e-33■■■■■ 32.3
DDX55-201ENST00000238146 PIGRP01833 764 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 APOC2P02655 101 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 EDN1P05305 212 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 KRT3P12035 628 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 AP2B1P63010 937 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 MRPS5P82675 430 aaKnown RBP16.16■□□□□ 0.18
DDX55-201ENST00000238146 DGKZQ13574 1117 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 HADHQ16836 314 aaKnown RBP16.16■□□□□ 0.18
DDX55-201ENST00000238146 PPM1NQ8N819 430 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 CCDC106Q9BWC9 280 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 WWP1Q9H0M0 922 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 DNAJB4Q9UDY4 337 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 WDR81Q562E7 1941 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 K7ERI5 159 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 CYB561D2O14569 222 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 MCF2LO15068 1137 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 TBC1D12O60347 775 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 SPAG6O75602 509 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 USP1O94782 785 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 BAG2O95816 211 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 PSAPP07602 524 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 KITP10721 976 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 KCNA2P16389 499 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 GSTT1P30711 240 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 AQP5P55064 265 aa16.16■□□□□ 0.18
DDX55-201ENST00000238146 KCNJ11Q14654 390 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms