RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 HADHQ16836 314 aaKnown RBP16.24■□□□□ 0.19
CTSD-201ENST00000236671 BBS9Q3SYG4 887 aa16.24■□□□□ 0.19
CTSD-201ENST00000236671 WASHC2DQ5SRD0 308 aa16.24■□□□□ 0.19
CTSD-201ENST00000236671 PALM2Q8IXS6 379 aa16.24■□□□□ 0.19
CTSD-201ENST00000236671 PRPF31Q8WWY3 499 aaKnown RBP16.24■□□□□ 0.19
CTSD-201ENST00000236671 KLF6Q99612 283 aaPredicted RBP16.24■□□□□ 0.19
CTSD-201ENST00000236671 CPSF3Q9UKF6 684 aaKnown RBP16.24■□□□□ 0.19
CTSD-201ENST00000236671 E7ENQ6 273 aa16.24■□□□□ 0.19
CTSD-201ENST00000236671 OGTO15294 1046 aa16.24■□□□□ 0.19
CTSD-201ENST00000236671 MAFO75444 373 aaPredicted RBP16.24■□□□□ 0.19
CTSD-201ENST00000236671 TSHRP16473 764 aa16.24■□□□□ 0.19
CTSD-201ENST00000236671 PAX7P23759 505 aa16.24■□□□□ 0.19
CTSD-201ENST00000236671 PTPN4P29074 926 aa16.24■□□□□ 0.19
CTSD-201ENST00000236671 CDC25CP30307 473 aa16.24■□□□□ 0.19
CTSD-201ENST00000236671 POLR2BP30876 1174 aaKnown RBP16.24■□□□□ 0.19
CTSD-201ENST00000236671 PSMC1P62191 440 aaKnown RBP16.24■□□□□ 0.19
CTSD-201ENST00000236671 YWHAEP62258 255 aaKnown RBP16.24■□□□□ 0.19
CTSD-201ENST00000236671 OVGP1Q12889 678 aa16.24■□□□□ 0.19
CTSD-201ENST00000236671 NOGQ13253 232 aa16.24■□□□□ 0.19
CTSD-201ENST00000236671 SEPT7Q16181 437 aaKnown RBP16.24■□□□□ 0.19
CTSD-201ENST00000236671 PDIK1LQ8N165 341 aa16.24■□□□□ 0.19
CTSD-201ENST00000236671 MIPEPQ99797 713 aa16.24■□□□□ 0.19
CTSD-201ENST00000236671 ACO2Q99798 780 aaKnown RBP16.24■□□□□ 0.19
CTSD-201ENST00000236671 LHX5Q9H2C1 402 aa16.24■□□□□ 0.19
CTSD-201ENST00000236671 DCTN4Q9UJW0 460 aa16.24■□□□□ 0.19
CTSD-201ENST00000236671 RPL26L1Q9UNX3 145 aaKnown RBP16.24■□□□□ 0.19
CTSD-201ENST00000236671 DOCK3Q8IZD9 2030 aa16.23■□□□□ 0.19
CTSD-201ENST00000236671 UNCXA6NJT0 531 aa16.23■□□□□ 0.19
CTSD-201ENST00000236671 APOC4-APOC2K7ER74 178 aa16.23■□□□□ 0.19
CTSD-201ENST00000236671 SMAPO00193 183 aa16.23■□□□□ 0.19
CTSD-201ENST00000236671 PDHXO00330 501 aa16.23■□□□□ 0.19
CTSD-201ENST00000236671 CXCL11O14625 94 aa16.23■□□□□ 0.19
CTSD-201ENST00000236671 APOC2P02655 101 aa16.23■□□□□ 0.19
CTSD-201ENST00000236671 EFNA5P52803 228 aa16.23■□□□□ 0.19
CTSD-201ENST00000236671 TFAMQ00059 246 aaKnown RBP16.23■□□□□ 0.19
CTSD-201ENST00000236671 TAF11Q15544 211 aa16.23■□□□□ 0.19
CTSD-201ENST00000236671 CDCA2Q69YH5 1023 aaPredicted RBP16.23■□□□□ 0.19
CTSD-201ENST00000236671 IGDCC3Q8IVU1 814 aa16.23■□□□□ 0.19
CTSD-201ENST00000236671 EMC1Q8N766 993 aa16.23■□□□□ 0.19
CTSD-201ENST00000236671 FAM71DQ8N9W8 422 aa16.23■□□□□ 0.19
CTSD-201ENST00000236671 FAXDC2Q96IV6 333 aa16.23■□□□□ 0.19
CTSD-201ENST00000236671 NUDCD1Q96RS6 583 aa16.23■□□□□ 0.19
CTSD-201ENST00000236671 CPXM1Q96SM3 734 aa16.23■□□□□ 0.19
CTSD-201ENST00000236671 DENND2DQ9H6A0 471 aaPredicted RBP16.23■□□□□ 0.19
CTSD-201ENST00000236671 MANSC1Q9H8J5 431 aa16.23■□□□□ 0.19
CTSD-201ENST00000236671 METTL5Q9NRN9 209 aaKnown RBP16.23■□□□□ 0.19
CTSD-201ENST00000236671 POLIQ9UNA4 740 aa16.23■□□□□ 0.19
CTSD-201ENST00000236671 CHMP2BQ9UQN3 213 aa16.23■□□□□ 0.19
CTSD-201ENST00000236671 HNRNPCL1O60812 293 aaKnown RBP16.22■□□□□ 0.19
CTSD-201ENST00000236671 FARP2O94887 1054 aaPredicted RBP16.22■□□□□ 0.19
CTSD-201ENST00000236671 DHRS4L1P0CG22 281 aa16.22■□□□□ 0.19
CTSD-201ENST00000236671 CD19P15391 556 aa16.22■□□□□ 0.19
CTSD-201ENST00000236671 ABL2P42684 1182 aa16.22■□□□□ 0.19
CTSD-201ENST00000236671 EIF3EP60228 445 aaKnown RBP16.22■□□□□ 0.19
CTSD-201ENST00000236671 CNTN2Q02246 1040 aa16.22■□□□□ 0.19
CTSD-201ENST00000236671 SURF1Q15526 300 aa16.22■□□□□ 0.19
CTSD-201ENST00000236671 CATSPERGQ6ZRH7 1159 aa16.22■□□□□ 0.19
CTSD-201ENST00000236671 XYLT1Q86Y38 959 aa16.22■□□□□ 0.19
CTSD-201ENST00000236671 RFX6Q8HWS3 928 aa16.22■□□□□ 0.19
CTSD-201ENST00000236671 IFNL1Q8IU54 200 aa16.22■□□□□ 0.19
CTSD-201ENST00000236671 TTC8Q8TAM2 541 aa16.22■□□□□ 0.19
CTSD-201ENST00000236671 SH3TC2Q8TF17 1288 aa16.22■□□□□ 0.19
CTSD-201ENST00000236671 CYTH2Q99418 400 aa16.22■□□□□ 0.19
CTSD-201ENST00000236671 NRBP2Q9NSY0 501 aa16.22■□□□□ 0.19
CTSD-201ENST00000236671 LRRC42Q9Y546 428 aa16.22■□□□□ 0.19
CTSD-201ENST00000236671 SPDYE16A6NNV3 312 aaPredicted RBP16.22■□□□□ 0.19
CTSD-201ENST00000236671 LIN7AO14910 233 aaPredicted RBP16.22■□□□□ 0.19
CTSD-201ENST00000236671 TRPA1O75762 1119 aa16.22■□□□□ 0.19
CTSD-201ENST00000236671 ERBB2P04626 1255 aa16.22■□□□□ 0.19
CTSD-201ENST00000236671 ETV4P43268 484 aa16.22■□□□□ 0.19
CTSD-201ENST00000236671 RAP1GAPP47736 663 aa16.22■□□□□ 0.19
CTSD-201ENST00000236671 NEK3P51956 506 aa16.22■□□□□ 0.19
CTSD-201ENST00000236671 NRLP54845 237 aa16.22■□□□□ 0.19
CTSD-201ENST00000236671 BASP1P80723 227 aaKnown RBP16.22■□□□□ 0.19
CTSD-201ENST00000236671 TAF5Q15542 800 aa16.22■□□□□ 0.19
CTSD-201ENST00000236671 SH3D19Q5HYK7 790 aa16.22■□□□□ 0.19
CTSD-201ENST00000236671 CMASQ8NFW8 434 aaPredicted RBP16.22■□□□□ 0.19
CTSD-201ENST00000236671 NAF1Q96HR8 494 aaKnown RBP16.22■□□□□ 0.19
CTSD-201ENST00000236671 MAF1Q9H063 256 aa16.22■□□□□ 0.19
CTSD-201ENST00000236671 ALG13Q9NP73 1137 aaKnown RBP16.22■□□□□ 0.19
CTSD-201ENST00000236671 MCF2LO15068 1137 aa16.21■□□□□ 0.19
CTSD-201ENST00000236671 LPXNO60711 386 aa16.21■□□□□ 0.19
CTSD-201ENST00000236671 ENTPD5O75356 428 aa16.21■□□□□ 0.19
CTSD-201ENST00000236671 SMNDC1O75940 238 aaKnown RBP eCLIP16.21■□□□□ 0.19
CTSD-201ENST00000236671 PRKCBP05771 671 aa16.21■□□□□ 0.19
CTSD-201ENST00000236671 MARK3P27448 753 aa16.21■□□□□ 0.19
CTSD-201ENST00000236671 MIPP30301 263 aa16.21■□□□□ 0.19
CTSD-201ENST00000236671 ELK3P41970 407 aa16.21■□□□□ 0.19
CTSD-201ENST00000236671 RAD23BP54727 409 aa16.21■□□□□ 0.19
CTSD-201ENST00000236671 BLMHQ13867 455 aa16.21■□□□□ 0.19
CTSD-201ENST00000236671 DPYSL3Q14195 570 aa16.21■□□□□ 0.19
CTSD-201ENST00000236671 SMYD5Q6GMV2 418 aa16.21■□□□□ 0.19
CTSD-201ENST00000236671 SH2D5Q6ZV89 423 aa16.21■□□□□ 0.19
CTSD-201ENST00000236671 LRRC6Q86X45 466 aa16.21■□□□□ 0.19
CTSD-201ENST00000236671 CHSY1Q86X52 802 aa16.21■□□□□ 0.19
CTSD-201ENST00000236671 KCTD6Q8NC69 237 aa16.21■□□□□ 0.19
CTSD-201ENST00000236671 DNERQ8NFT8 737 aa16.21■□□□□ 0.19
CTSD-201ENST00000236671 PTCD3Q96EY7 689 aaKnown RBP16.21■□□□□ 0.19
CTSD-201ENST00000236671 APOPT1Q96IL0 206 aa16.21■□□□□ 0.19
CTSD-201ENST00000236671 SERAC1Q96JX3 654 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms