RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 KIAA1671Q9BY89 1806 aa19.53■□□□□ 0.72
SNX17-201ENST00000233575 CCDC66A2RUB6 948 aa19.52■□□□□ 0.72
SNX17-201ENST00000233575 GJC1P36383 396 aa19.52■□□□□ 0.72
SNX17-201ENST00000233575 TKTL1P51854 596 aa19.52■□□□□ 0.72
SNX17-201ENST00000233575 ARPP19P56211 112 aa19.52■□□□□ 0.72
SNX17-201ENST00000233575 C2orf54Q08AI8 447 aa19.52■□□□□ 0.72
SNX17-201ENST00000233575 ELAVL2Q12926 359 aaKnown RBP19.52■□□□□ 0.72
SNX17-201ENST00000233575 PIGHQ14442 188 aaPredicted RBP19.52■□□□□ 0.72
SNX17-201ENST00000233575 MAPRE1Q15691 268 aaKnown RBP19.52■□□□□ 0.72
SNX17-201ENST00000233575 TXNRD3NBQ6F5E7 133 aa19.52■□□□□ 0.72
SNX17-201ENST00000233575 ZNF280DQ6N043 979 aa19.52■□□□□ 0.72
SNX17-201ENST00000233575 SPATA2LQ8IUW3 424 aaPredicted RBP19.52■□□□□ 0.72
SNX17-201ENST00000233575 NIPA2Q8N8Q9 360 aa19.52■□□□□ 0.72
SNX17-201ENST00000233575 FNIP1Q8TF40 1166 aa19.52■□□□□ 0.72
SNX17-201ENST00000233575 TTPALQ9BTX7 342 aa19.52■□□□□ 0.72
SNX17-201ENST00000233575 CARD9Q9H257 536 aa19.52■□□□□ 0.72
SNX17-201ENST00000233575 LRRC4Q9HBW1 653 aa19.52■□□□□ 0.72
SNX17-201ENST00000233575 ABI2Q9NYB9 513 aaPredicted RBP19.52■□□□□ 0.72
SNX17-201ENST00000233575 CES2O00748 559 aa19.52■□□□□ 0.72
SNX17-201ENST00000233575 PYGMP11217 842 aa19.52■□□□□ 0.72
SNX17-201ENST00000233575 CKAP4Q07065 602 aaKnown RBP19.52■□□□□ 0.72
SNX17-201ENST00000233575 ERCC6LQ2NKX8 1250 aa19.52■□□□□ 0.72
SNX17-201ENST00000233575 C15orf59Q2T9L4 293 aaPredicted RBP19.52■□□□□ 0.72
SNX17-201ENST00000233575 CFAP221Q4G0U5 840 aa19.52■□□□□ 0.72
SNX17-201ENST00000233575 ATP13A4Q4VNC1 1196 aa19.52■□□□□ 0.72
SNX17-201ENST00000233575 ZDHHC17Q8IUH5 632 aa19.52■□□□□ 0.72
SNX17-201ENST00000233575 RNF168Q8IYW5 571 aaPredicted RBP19.52■□□□□ 0.72
SNX17-201ENST00000233575 RNPC3Q96LT9 517 aaKnown RBP19.52■□□□□ 0.72
SNX17-201ENST00000233575 CFAP57Q96MR6 1250 aa19.52■□□□□ 0.72
SNX17-201ENST00000233575 TBC1D4O60343 1298 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 LRCH4O75427 683 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 GJB5O95377 273 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 PDGFRAP16234 1089 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 GPD1P21695 349 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 SNX16P57768 344 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 LLGL1Q15334 1064 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 TEX35Q5T0J7 233 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 RSRC2Q7L4I2 434 aaKnown RBP19.51■□□□□ 0.71
SNX17-201ENST00000233575 SLC26A9Q7LBE3 791 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 SLC39A11Q8N1S5 342 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 RASGEF1CQ8N431 466 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 TTC9BQ8N6N2 239 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 ZNF558Q96NG5 402 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 ULBP1Q9BZM6 244 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 EPC1Q9H2F5 836 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 KLHL11Q9NVR0 708 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 EFCAB8A8MWE9 144 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 TFE3P19532 575 aaPredicted RBP19.51■□□□□ 0.71
SNX17-201ENST00000233575 ZNF143P52747 638 aaPredicted RBP19.51■□□□□ 0.71
SNX17-201ENST00000233575 RWDD2BP57060 319 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 CDO1Q16878 200 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 CCDC14Q49A88 953 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 RAB41Q5JT25 222 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 C4orf50Q6ZRC1 276 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 DCP1BQ8IZD4 617 aaKnown RBP19.51■□□□□ 0.71
SNX17-201ENST00000233575 SIX6OS1Q8N1H7 587 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 COLGALT1Q8NBJ5 622 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 ATAD1Q8NBU5 361 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 STKLD1Q8NE28 680 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 SPATA4Q8NEY3 305 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 ACSF2Q96CM8 615 aaPredicted RBP19.51■□□□□ 0.71
SNX17-201ENST00000233575 ADAM33Q9BZ11 813 aa19.51■□□□□ 0.71
SNX17-201ENST00000233575 DMAP1Q9NPF5 467 aaPredicted RBP19.51■□□□□ 0.71
SNX17-201ENST00000233575 PATJQ8NI35 1801 aa19.5■□□□□ 0.71
SNX17-201ENST00000233575 C2CD2LO14523 706 aa19.5■□□□□ 0.71
SNX17-201ENST00000233575 ADAM12O43184 909 aa19.5■□□□□ 0.71
SNX17-201ENST00000233575 RPL17P18621 184 aaKnown RBP19.5■□□□□ 0.71
SNX17-201ENST00000233575 PAFAH1B1P43034 410 aa19.5■□□□□ 0.71
SNX17-201ENST00000233575 MRPS5P82675 430 aaKnown RBP19.5■□□□□ 0.71
SNX17-201ENST00000233575 ATP11AP98196 1134 aa19.5■□□□□ 0.71
SNX17-201ENST00000233575 HFE2Q6ZVN8 426 aa19.5■□□□□ 0.71
SNX17-201ENST00000233575 ZNF572Q7Z3I7 529 aaPredicted RBP19.5■□□□□ 0.71
SNX17-201ENST00000233575 RHOT1Q8IXI2 618 aa19.5■□□□□ 0.71
SNX17-201ENST00000233575 ACTRT1Q8TDG2 376 aa19.5■□□□□ 0.71
SNX17-201ENST00000233575 OR6C75A6NL08 312 aa19.49■□□□□ 0.71
SNX17-201ENST00000233575 VNN2O95498 520 aa19.49■□□□□ 0.71
SNX17-201ENST00000233575 FGGP02679 453 aa19.49■□□□□ 0.71
SNX17-201ENST00000233575 USP17L7P0C7H9 530 aa19.49■□□□□ 0.71
SNX17-201ENST00000233575 IL1R2P27930 398 aa19.49■□□□□ 0.71
SNX17-201ENST00000233575 GRIK1P39086 918 aa19.49■□□□□ 0.71
SNX17-201ENST00000233575 GPR15P49685 360 aa19.49■□□□□ 0.71
SNX17-201ENST00000233575 USP41Q3LFD5 358 aa19.49■□□□□ 0.71
SNX17-201ENST00000233575 SDHAF4Q5VUM1 108 aa19.49■□□□□ 0.71
SNX17-201ENST00000233575 RIN2Q8WYP3 895 aaPredicted RBP19.49■□□□□ 0.71
SNX17-201ENST00000233575 RBM12Q9NTZ6 932 aaKnown RBP19.49■□□□□ 0.71
SNX17-201ENST00000233575 RNF14Q9UBS8 474 aa19.49■□□□□ 0.71
SNX17-201ENST00000233575 PGRMC1O00264 195 aaKnown RBP19.49■□□□□ 0.71
SNX17-201ENST00000233575 PSTPIP1O43586 416 aa19.49■□□□□ 0.71
SNX17-201ENST00000233575 LINC00271P0C7V0 271 aa19.49■□□□□ 0.71
SNX17-201ENST00000233575 CPB1P15086 417 aa19.49■□□□□ 0.71
SNX17-201ENST00000233575 HTRA4P83105 476 aaPredicted RBP19.49■□□□□ 0.71
SNX17-201ENST00000233575 SLC25A11Q02978 314 aaKnown RBP19.49■□□□□ 0.71
SNX17-201ENST00000233575 ELF2Q15723 593 aa19.49■□□□□ 0.71
SNX17-201ENST00000233575 PSRC1Q6PGN9 363 aaPredicted RBP19.49■□□□□ 0.71
SNX17-201ENST00000233575 ANKS3Q6ZW76 656 aa19.49■□□□□ 0.71
SNX17-201ENST00000233575 ANKS1BQ7Z6G8 1248 aa19.49■□□□□ 0.71
SNX17-201ENST00000233575 ADAT2Q7Z6V5 191 aaKnown RBP19.49■□□□□ 0.71
SNX17-201ENST00000233575 SCN4BQ8IWT1 228 aa19.49■□□□□ 0.71
SNX17-201ENST00000233575 SCAMP5Q8TAC9 235 aa19.49■□□□□ 0.71
SNX17-201ENST00000233575 FAM149B1Q96BN6 582 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms