RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 CNGB3Q9NQW8 809 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 HOXC10Q9NYD6 342 aa13.55□□□□□ -0.24
MSH2-201ENST00000233146 H3BNH8 94 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 CAPNS1P04632 268 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 ABCB1P08183 1280 aaPredicted RBP13.54□□□□□ -0.24
MSH2-201ENST00000233146 MESDQ14696 234 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 SLC15A2Q16348 729 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 IZUMO3Q5VZ72 239 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 GPR141Q7Z602 305 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 LSMEM2Q8N112 164 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 NGDNQ8NEJ9 315 aaKnown RBP13.54□□□□□ -0.24
MSH2-201ENST00000233146 TANKQ92844 425 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 CCDC124Q96CT7 223 aaKnown RBP13.54□□□□□ -0.24
MSH2-201ENST00000233146 IMPG2Q9BZV3 1241 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 WWP1Q9H0M0 922 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 PCDHA2Q9Y5H9 948 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 RGPD2P0DJD1 1756 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 FAM170AA1A519 330 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 CENPBD1B2RD01 187 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 KLF11O14901 512 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 ATP5BP06576 529 aaKnown RBP13.54□□□□□ -0.24
MSH2-201ENST00000233146 PSMC3P17980 439 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 ETV4P43268 484 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 ITGADQ13349 1161 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 PARP10Q53GL7 1025 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 TMTC4Q5T4D3 741 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 SLC15A4Q8N697 577 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 ATG4AQ8WYN0 398 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 ALKBH8Q96BT7 664 aaKnown RBP13.54□□□□□ -0.24
MSH2-201ENST00000233146 FERMT1Q9BQL6 677 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 EPS15L1Q9UBC2 864 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 STRIP2Q9ULQ0 834 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 PSME4Q14997 1843 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 RIC1Q4ADV7 1423 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 CLOCKO15516 846 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 STAM2O75886 525 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 SERPINA6P08185 405 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 TNFAIP3P21580 790 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 IL6STP40189 918 aaPredicted RBP13.54□□□□□ -0.24
MSH2-201ENST00000233146 ADGRE1Q14246 886 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 C4orf22Q6V702 233 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 REM2Q8IYK8 340 aaPredicted RBP13.54□□□□□ -0.24
MSH2-201ENST00000233146 EXD1Q8NHP7 514 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 MZB1Q8WU39 189 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 MRRFQ96E11 262 aaKnown RBP13.54□□□□□ -0.24
MSH2-201ENST00000233146 WNK4Q96J92 1243 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 FAR2Q96K12 515 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 DOK1Q99704 481 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 ZBTB1Q9Y2K1 713 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 SLC30A1Q9Y6M5 507 aa13.54□□□□□ -0.24
MSH2-201ENST00000233146 SMIM22K7EJ46 135 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 TBCAO75347 108 aaKnown RBP13.53□□□□□ -0.24
MSH2-201ENST00000233146 CD247P20963 164 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 ADSLP30566 484 aaPredicted RBP13.53□□□□□ -0.24
MSH2-201ENST00000233146 ALDH18A1P54886 795 aaKnown RBP13.53□□□□□ -0.24
MSH2-201ENST00000233146 ATP6V0D1P61421 351 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 PDIA2Q13087 525 aaKnown RBP13.53□□□□□ -0.24
MSH2-201ENST00000233146 SUZ12Q15022 739 aaKnown RBP13.53□□□□□ -0.24
MSH2-201ENST00000233146 AGAP7PQ5VUJ5 663 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 LYSMD3Q7Z3D4 306 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 RPF2Q9H7B2 306 aaKnown RBP13.53□□□□□ -0.24
MSH2-201ENST00000233146 RIC8BQ9NVN3 520 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 GCNT4Q9P109 453 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 RIMS3Q9UJD0 308 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 USP54Q70EL1 1684 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 ADAMTS7Q9UKP4 1686 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 ASTN2O75129 1339 aaPredicted RBP13.53□□□□□ -0.24
MSH2-201ENST00000233146 TRIM64BA6NI03 449 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 A6NL46 340 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 LDHBP07195 334 aaKnown RBP13.53□□□□□ -0.24
MSH2-201ENST00000233146 TXNL4AP83876 142 aaKnown RBP13.53□□□□□ -0.24
MSH2-201ENST00000233146 KRT76Q01546 638 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 CDK18Q07002 472 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 UBAP2LQ14157 1087 aaKnown RBP13.53□□□□□ -0.24
MSH2-201ENST00000233146 EFHC2Q5JST6 749 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 PPP4R3CPQ6ZMV5 832 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 FRA10AC1Q70Z53 315 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 CPNE8Q86YQ8 564 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 HPS6Q86YV9 775 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 MARCH10Q8NA82 808 aaPredicted RBP13.53□□□□□ -0.24
MSH2-201ENST00000233146 LRGUKQ96M69 825 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 FBXL18Q96ME1 805 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 CNTN3Q9P232 1028 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 SLAIN2Q9P270 581 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 ANKMY1Q9P2S6 941 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 CDC14AQ9UNH5 594 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 EXOC7Q9UPT5 735 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 SORCS3Q9UPU3 1222 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 PPME1Q9Y570 386 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 CPQQ9Y646 472 aa13.53□□□□□ -0.24
MSH2-201ENST00000233146 A8MU76 341 aa13.52□□□□□ -0.24
MSH2-201ENST00000233146 MINDY4BA8MYZ0 360 aa13.52□□□□□ -0.24
MSH2-201ENST00000233146 CCNT1O60563 726 aaKnown RBP13.52□□□□□ -0.24
MSH2-201ENST00000233146 NR2F2P24468 414 aa13.52□□□□□ -0.24
MSH2-201ENST00000233146 LLGL1Q15334 1064 aa13.52□□□□□ -0.24
MSH2-201ENST00000233146 ANKRD26P1Q6NSI1 321 aa13.52□□□□□ -0.24
MSH2-201ENST00000233146 KCNK18Q7Z418 384 aa13.52□□□□□ -0.24
MSH2-201ENST00000233146 SLC38A6Q8IZM9 456 aa13.52□□□□□ -0.24
MSH2-201ENST00000233146 FBXW8Q8N3Y1 598 aa13.52□□□□□ -0.24
MSH2-201ENST00000233146 NLRP7Q8WX94 980 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms