RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 IQANK1A0A1B0GTG1 560 aa18.04■□□□□ 0.48
USB1-201ENST00000219281 HNRNPCL1O60812 293 aaKnown RBP18.04■□□□□ 0.48
USB1-201ENST00000219281 ERBB2P04626 1255 aa18.04■□□□□ 0.48
USB1-201ENST00000219281 HOXC6P09630 235 aa18.04■□□□□ 0.48
USB1-201ENST00000219281 NEFHP12036 1026 aa18.04■□□□□ 0.48
USB1-201ENST00000219281 FAAP100Q0VG06 881 aa18.04■□□□□ 0.48
USB1-201ENST00000219281 KBTBD12Q3ZCT8 623 aa18.04■□□□□ 0.48
USB1-201ENST00000219281 NPNTQ6UXI9 565 aa18.04■□□□□ 0.48
USB1-201ENST00000219281 XYLT1Q86Y38 959 aa18.04■□□□□ 0.48
USB1-201ENST00000219281 SPATA18Q8TC71 538 aa18.04■□□□□ 0.48
USB1-201ENST00000219281 PRR11Q96HE9 360 aaPredicted RBP18.04■□□□□ 0.48
USB1-201ENST00000219281 LHX5Q9H2C1 402 aa18.04■□□□□ 0.48
USB1-201ENST00000219281 IKBKGQ9Y6K9 419 aa18.04■□□□□ 0.48
USB1-201ENST00000219281 APOC4-APOC2K7ER74 178 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 MCF2LO15068 1137 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 MAFO75444 373 aaPredicted RBP18.03■□□□□ 0.48
USB1-201ENST00000219281 APOC2P02655 101 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 SERPINB3P29508 390 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 MIPP30301 263 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 PTDSS1P48651 473 aaKnown RBP18.03■□□□□ 0.48
USB1-201ENST00000219281 STAT5BP51692 787 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 CDH8P55286 799 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 FNIP1Q8TF40 1166 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 UPF1Q92900 1129 aaKnown RBP eCLIP18.03■□□□□ 0.485e-19■■■■□ 21.5
USB1-201ENST00000219281 DCPSQ96C86 337 aaKnown RBP18.03■□□□□ 0.48
USB1-201ENST00000219281 TMEM120AQ9BXJ8 343 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 KCNK13Q9HB14 408 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 WDR90Q96KV7 1748 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 TCRBV9S1A1TA0A576 114 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 KBTBD13C9JR72 458 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 LIN7AO14910 233 aaPredicted RBP18.03■□□□□ 0.48
USB1-201ENST00000219281 MED7O43513 233 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 CCDC22O60826 627 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 PRKCBP05771 671 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 KRT19P08727 400 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 PYGBP11216 843 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 TSHRP16473 764 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 BGNP21810 368 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 UBA1P22314 1058 aaKnown RBP18.03■□□□□ 0.48
USB1-201ENST00000219281 NEK3P51956 506 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 EFNA5P52803 228 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 YWHAGP61981 247 aaKnown RBP eCLIP18.03■□□□□ 0.48
USB1-201ENST00000219281 ZNF200P98182 395 aaPredicted RBP18.03■□□□□ 0.48
USB1-201ENST00000219281 MMRN1Q13201 1228 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 KHDC1Q4VXA5 237 aaKnown RBP18.03■□□□□ 0.48
USB1-201ENST00000219281 CAPRIN2Q6IMN6 1127 aaKnown RBP18.03■□□□□ 0.48
USB1-201ENST00000219281 DARS2Q6PI48 645 aaKnown RBP18.03■□□□□ 0.48
USB1-201ENST00000219281 C4orf50Q6ZRC1 276 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 MOB2Q70IA6 237 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 ZC3H18Q86VM9 953 aaKnown RBP18.03■□□□□ 0.48
USB1-201ENST00000219281 RIOX2Q8IUF8 465 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 SULF1Q8IWU6 871 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 TMEM130Q8N3G9 435 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 PTCD3Q96EY7 689 aaKnown RBP18.03■□□□□ 0.48
USB1-201ENST00000219281 CLMNQ96JQ2 1002 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 BTBD10Q9BSF8 475 aa18.03■□□□□ 0.48
USB1-201ENST00000219281 FBXO6Q9NRD1 293 aaPredicted RBP18.03■□□□□ 0.48
USB1-201ENST00000219281 C2orf71A6NGG8 1288 aa18.02■□□□□ 0.48
USB1-201ENST00000219281 SMAPO00193 183 aa18.02■□□□□ 0.48
USB1-201ENST00000219281 ABLIM1O14639 778 aa18.02■□□□□ 0.48
USB1-201ENST00000219281 TRUB2O95900 331 aaKnown RBP18.02■□□□□ 0.48
USB1-201ENST00000219281 TNNC2P02585 160 aa18.02■□□□□ 0.48
USB1-201ENST00000219281 INHBAP08476 426 aa18.02■□□□□ 0.48
USB1-201ENST00000219281 DHRS4L1P0CG22 281 aa18.02■□□□□ 0.48
USB1-201ENST00000219281 ETV4P43268 484 aa18.02■□□□□ 0.48
USB1-201ENST00000219281 ZBTB16Q05516 673 aa18.02■□□□□ 0.48
USB1-201ENST00000219281 SURF1Q15526 300 aa18.02■□□□□ 0.48
USB1-201ENST00000219281 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.02■□□□□ 0.48
USB1-201ENST00000219281 CMASQ8NFW8 434 aaPredicted RBP18.02■□□□□ 0.48
USB1-201ENST00000219281 SH3TC2Q8TF17 1288 aa18.02■□□□□ 0.48
USB1-201ENST00000219281 APOPT1Q96IL0 206 aa18.02■□□□□ 0.48
USB1-201ENST00000219281 NSL1Q96IY1 281 aa18.02■□□□□ 0.48
USB1-201ENST00000219281 ZNF668Q96K58 619 aaPredicted RBP18.02■□□□□ 0.48
USB1-201ENST00000219281 OSBPL1AQ9BXW6 950 aa18.02■□□□□ 0.48
USB1-201ENST00000219281 DCLRE1BQ9H816 532 aa18.02■□□□□ 0.48
USB1-201ENST00000219281 CORO1CQ9ULV4 474 aaPredicted RBP18.02■□□□□ 0.48
USB1-201ENST00000219281 RPL26L1Q9UNX3 145 aaKnown RBP18.02■□□□□ 0.48
USB1-201ENST00000219281 CSADQ9Y600 493 aa18.02■□□□□ 0.48
USB1-201ENST00000219281 SOWAHBA6NEL2 793 aa18.02■□□□□ 0.47
USB1-201ENST00000219281 AVILO75366 819 aa18.02■□□□□ 0.47
USB1-201ENST00000219281 FARP2O94887 1054 aaPredicted RBP18.02■□□□□ 0.47
USB1-201ENST00000219281 PCK1P35558 622 aa18.02■□□□□ 0.47
USB1-201ENST00000219281 CDK16Q00536 496 aa18.02■□□□□ 0.47
USB1-201ENST00000219281 ROR1Q01973 937 aa18.02■□□□□ 0.47
USB1-201ENST00000219281 PRKD1Q15139 912 aaPredicted RBP18.02■□□□□ 0.47
USB1-201ENST00000219281 DSTYKQ6XUX3 929 aa18.02■□□□□ 0.47
USB1-201ENST00000219281 CDR2LQ86X02 465 aaPredicted RBP18.02■□□□□ 0.47
USB1-201ENST00000219281 LRRC71Q8N4P6 559 aa18.02■□□□□ 0.47
USB1-201ENST00000219281 RNF149Q8NC42 400 aa18.02■□□□□ 0.47
USB1-201ENST00000219281 SLC44A1Q8WWI5 657 aa18.02■□□□□ 0.47
USB1-201ENST00000219281 ANKRD36BP1Q96IX9 119 aa18.02■□□□□ 0.47
USB1-201ENST00000219281 ELP3Q9H9T3 547 aa18.02■□□□□ 0.47
USB1-201ENST00000219281 RNF181Q9P0P0 153 aa18.02■□□□□ 0.47
USB1-201ENST00000219281 USP18Q9UMW8 372 aa18.02■□□□□ 0.47
USB1-201ENST00000219281 MTO1Q9Y2Z2 717 aaKnown RBP18.02■□□□□ 0.47
USB1-201ENST00000219281 PTPRFP10586 1907 aa18.02■□□□□ 0.47
USB1-201ENST00000219281 GSC2O15499 205 aa18.01■□□□□ 0.47
USB1-201ENST00000219281 RNF8O76064 485 aa18.01■□□□□ 0.47
USB1-201ENST00000219281 LMNAP02545 664 aaKnown RBP18.01■□□□□ 0.47
USB1-201ENST00000219281 SLC18A2Q05940 514 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms