RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Klrb1bP27812 223 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 PhbP67778 272 aaKnown RBP13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Npas2P97460 816 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Ripply1Q2WG77 201 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Mfhas1Q3V1N1 1048 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Itga1Q3V3R4 1179 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Nuak1Q641K5 658 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Rad54bQ6PFE3 886 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Tmc8Q7TN58 722 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Als2cr12Q8BVM7 383 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Q8CCC3 530 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Stau2Q8CJ67 570 aaKnown RBP13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Tbc1d13Q8R3D1 400 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Spata9Q9D9R3 252 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Actn2Q9JI91 894 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 B4galt4Q9JJ04 344 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Caln1Q9JJG7 219 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Snx1Q9WV80 522 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Zfp990B1AVN5 605 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Zc3h12bG3X9I7 835 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Mup13L7N222 235 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 StrnO55106 780 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 PorP37040 678 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 GsrP47791 500 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 PfkmP47857 780 aaKnown RBP13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 HpdP49429 393 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 CtswP56203 371 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Rpl22P67984 128 aaKnown RBP13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Col6a1Q04857 1025 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Tmem120bQ3TA38 339 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Q3TQQ9 903 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Mrgprx2Q3UG50 352 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 GapdhsQ64467 440 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Kiaa1328Q6NZK5 612 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Vmn2r26Q6TAC4 855 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Mrgprb8Q7TN51 330 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Lrfn2Q80TG9 788 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Zbed4Q80WQ9 1168 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Q80WR5 230 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Ankrd52Q8BTI7 1076 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Gpr20Q8BYC4 358 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Zfp120Q8BZW4 436 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Ints9Q8K114 658 aaKnown RBP13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Prpsap2Q8R574 369 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 CoprsQ9CQ13 173 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Raver1Q9CW46 748 aaKnown RBP13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Kifc1Q9QWT9 674 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 TfgQ9Z1A1 397 aa13.93□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 FancfE9Q5Z5 343 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 AlpiF8VPQ6 554 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Vmn2r55G3UWZ4 781 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Gml2G5E8L7 176 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Vmn2r53L7N473 806 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Mcpt4P21812 246 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Irs1P35569 1233 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Serpina5P70458 405 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Fscn2Q32M02 492 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Fam107bQ3TGF2 131 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Fam172aQ3TNH5 417 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 9130409I23RikQ3TS87 320 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Psg28Q4KL66 472 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Cfap52Q5F201 620 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Znf235Q61116 645 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Nab1Q61122 486 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Olfr389Q7TRX7 312 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Efcab14Q8BGQ6 484 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Tmem260Q8BMD6 703 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 RalylQ8BTF8 293 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Fam43aQ8BUP8 424 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Pih1h3bQ8C6P5 218 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Dmtf1Q8CE22 761 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Prpf39Q8K2Z2 665 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Vmn1r191Q8K4D0 298 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Pdik1lQ8QZR7 341 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Adi1Q99JT9 179 aa13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Ssu72Q9CY97 194 aaKnown RBP13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 TarsQ9D0R2 722 aaKnown RBP13.92□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Lrrc10bG3XA50 292 aa13.91□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Serpinb9O08797 374 aa13.91□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Diaph2O70566 1098 aa13.91□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 HunkO88866 714 aa13.91□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 PrlP06879 226 aa13.91□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Cd86P42082 309 aa13.91□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 GaaP70699 953 aa13.91□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Prdx5P99029 210 aa13.91□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Ndst1Q3UHN9 882 aa13.91□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Pld5Q3UNN8 536 aa13.91□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Gm14685Q52KH6 695 aa13.91□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Fscn1Q61553 493 aa13.91□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Birc2Q62210 612 aa13.91□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Tbc1d12Q6A039 696 aa13.91□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Tas2r102Q7M717 329 aa13.91□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Nipal1Q8BMW7 416 aa13.91□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Nipal4Q8BZF2 406 aa13.91□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Taf5Q8C092 801 aa13.91□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Cabs1Q8C633 391 aa13.91□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Timd2Q8R183 305 aa13.91□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Rin1Q921Q7 763 aa13.91□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 Fam3aQ9D8T0 230 aa13.91□□□□□ -0.18
Pdlim5-208ENSMUST00000196220 MrgbpQ9DAT2 204 aa13.91□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms