RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Fam193bQ3U2K0 892 aa13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 Slc20a1Q61609 681 aa13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 Ugt1a9Q62452 528 aa13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 Ugt1a1Q63886 535 aa13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 Pde1cQ64338 706 aa13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 RbfaQ6P3B9 350 aa13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 Zdhhc17Q80TN5 632 aa13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 Rnaseh2bQ80ZV0 308 aa13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 Ostm1Q8BGT0 338 aa13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 DcakdQ8BHC4 231 aaKnown RBP13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 Haus1Q8BHX1 278 aa13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 Uba3Q8C878 462 aa13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 Ccdc28aQ8CEI3 192 aa13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 Tada2aQ8CHV6 443 aa13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 Syn3Q8JZP2 579 aa13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 Gas2l1Q8JZP9 678 aa13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 IntS13Q8QZV7 732 aa13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 Serpina10Q8R121 448 aa13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 Pip4k2cQ91XU3 421 aa13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 MrgpreQ91ZB7 310 aa13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 Thap12Q9CUX1 758 aa13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 Ephx1Q9D379 455 aa13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 Mrpl4Q9DCU6 294 aaKnown RBP13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 Rab13Q9DD03 202 aa13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 IvdQ9JHI5 424 aa13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 Habp4Q9JKS5 411 aaKnown RBP13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 St6galnac4Q9R2B6 360 aa13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 Ankrd2Q9WV06 328 aa13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 Tjp2Q9Z0U1 1167 aaKnown RBP13.04□□□□□ -0.32
Trim50-202ENSMUST00000111180 9330159F19RikD3Z623 648 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 TpteG5E8H5 664 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 TertO70372 1122 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Myl1P05977 188 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Anxa5P48036 319 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 AdkP55264 361 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 YwhahP68510 246 aaKnown RBP13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Grin2cQ01098 1239 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Tmc5Q32NZ6 967 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Aarsd1Q3THG9 412 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Uri1Q3TLD5 531 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Cyp2j11Q3UNV2 504 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Rbm20Q3UQS8 1199 aaKnown RBP13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Ice2Q3UZ18 988 aaKnown RBP13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Ttf2Q5NC05 1138 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Mapre1Q61166 268 aaKnown RBP13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 EsrrbQ61539 433 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Ptpn14Q62130 1189 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Xpo1Q6P5F9 1071 aaKnown RBP13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 TxlnaQ6PAM1 554 aaKnown RBP13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 SpopQ6ZWS8 374 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Adcy2Q80TL1 1090 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Dnajc16Q80TN4 772 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Frmd3Q8BHD4 595 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 H6pdQ8CFX1 789 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Zbtb6Q8K088 423 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Unc5bQ8K1S3 945 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Rassf9Q8K342 435 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Tada3Q8R0L9 432 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Hip1Q8VD75 1029 aaKnown RBP13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Pcdha11Q91Y19 950 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Synpo2Q91YE8 1087 aaKnown RBP13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 AdarQ99MU3 1178 aaKnown RBP13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Golph3Q9CRA5 298 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Fam212aQ9CX62 282 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Gfra4Q9JJT2 260 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Ly6g6dQ9Z1Q3 135 aa13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Sf3b1Q99NB9 1304 aaKnown RBP13.03□□□□□ -0.32
Trim50-202ENSMUST00000111180 Tldc2A2ACG1 198 aa13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Sh2d4bA6X942 431 aa13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Nlgn4lB0F2B4 945 aa13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Ppfia4B8QI36 1187 aa13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Gm3371F7CQW8 167 aa13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Vmn2r111K7N674 857 aa13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Itgb1P09055 798 aaKnown RBP13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Hoxb8P09632 243 aa13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Uchl4P58321 233 aa13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Slc26a1P58735 704 aa13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Tubb4bP68372 445 aaKnown RBP13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Cdr2P97817 455 aa13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 H2-Q2Q4KN81 360 aa13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Ctc1Q5SUQ9 1212 aa13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 OgdhQ60597 1023 aaKnown RBP13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Ctnna2Q61301 953 aa13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 MyorgQ69ZQ1 716 aa13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 SugctQ7TNE1 436 aa13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Llgl1Q80Y17 1036 aa13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Camta2Q80Y50 1208 aa13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Daam1Q8BPM0 1077 aa13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Fam129bQ8R1F1 749 aa13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Afg3l1Q920A7 789 aaKnown RBP13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Ubxn1Q922Y1 297 aa13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Dph5Q9CWQ0 281 aa13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Atg7Q9D906 698 aa13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Xab2Q9DCD2 855 aaKnown RBP13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Erap1Q9EQH2 930 aa13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Oxct2bQ9ESL0 520 aa13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Oxct2aQ9JJN4 520 aa13.02□□□□□ -0.33
Trim50-202ENSMUST00000111180 Unc80Q8BLN6 3261 aa13.01□□□□□ -0.33
Trim50-202ENSMUST00000111180 Lrrc74aA0A1Y7VMD6 494 aa13.01□□□□□ -0.33
Trim50-202ENSMUST00000111180 Wfdc11A2A5H7 82 aa13.01□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 64.7 ms