RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Rpl10aP53026 217 aaKnown RBP10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Pfkfb2P70265 519 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ccndbp1Q3TVC7 356 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Tmed1Q3V009 227 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Syce2Q505B8 171 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Nlrp4eQ66X19 978 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ccdc154Q6RUT8 657 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Thnsl1Q8BH55 747 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 B3glctQ8BHT6 489 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Gjd4Q8BSD4 364 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Mcoln2Q8K595 566 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 IrgqQ8VIM9 583 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Q9DA42 136 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Slc15a2Q9ES07 729 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 B4galt5Q9JMK0 388 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Gon4lQ9DB00 2260 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Disp2Q8CIP5 1345 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Gm6370A0A0G2JGX9 315 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Gm16430A6X8J1 155 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Zfp990B1AVN5 605 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Gm6309L7N481 315 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Efna5O08543 228 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 ThbdP15306 577 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Plk1Q07832 603 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Mif4gdQ3UBZ5 222 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Fam8a1Q3URQ4 399 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Pcmtd2Q8BHD8 359 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Klhl38Q8BSF5 581 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 OlahQ8R197 265 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Kdelr1Q99JH8 212 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Slxl1Q9D515 155 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Cul3Q9JLV5 768 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Mta2Q9R190 668 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Mpp2Q9WV34 552 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ror1Q9Z139 937 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Tsc2Q61037 1814 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 4931406B18RikA2RSL7 367 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Gm3187M0QWW3 260 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Magea8O89012 320 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ccdc127Q3TC33 260 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 PapolaQ61183 739 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ptpn14Q62130 1189 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Cdc14aQ6GQT0 603 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Inpp4bQ6P1Y8 924 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 ErfeQ6PGN1 340 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Sun2Q8BJS4 731 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ccser1Q8C0C4 895 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Robo4Q8C310 1012 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 DolkQ8R2Y3 534 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Glis2Q8VDL9 521 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ubxn2aQ99KJ0 258 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Q9CPS8 106 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 MceeQ9D1I5 178 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Tmx2Q9D710 295 aaKnown RBP10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Cables1Q9ESJ1 568 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Tk2Q9R088 270 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Serpinb3aG3X9V8 387 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 PtpraP18052 829 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Tbx3P70324 741 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Mettl17Q3U2U7 461 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Nt5dc3Q3UHB1 546 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Q3UTZ3 580 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Myo1gQ5SUA5 1024 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Garem2Q6PAJ3 880 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Usp8Q80U87 1080 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Btbd10Q80X66 475 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Nlrp4aQ8BU40 982 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Rbbp5Q8BX09 538 aaKnown RBP10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Oma1Q9D8H7 521 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Stk32bQ9JJX8 414 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ccr10Q9JL21 362 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Efcab12V9GXH0 673 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ubr3Q5U430 1889 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Scn3aA2ASI5 1947 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Vmn2r87E9PZX4 848 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Vmn2r39L7N2E5 861 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Mcpt4P21812 246 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ptpn11P35235 597 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Hace1Q3U0D9 909 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Trcg1Q58Y74 825 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Gcnt3Q5JCT0 437 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Fbxo39Q5NBU5 443 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Cyb5d1Q5NCY3 228 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Papd5Q68ED3 633 aaKnown RBP10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Orai3Q6P8G8 290 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Fam185aQ7TPD2 378 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Dupd1Q8BK84 215 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Pi4kbQ8BKC8 816 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Phka2Q8BWJ3 1235 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Spats2lQ91WJ7 558 aaKnown RBP10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 4921530L21RikQ9CQ47 274 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Polr3hQ9D2C6 204 aaKnown RBP10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Doc2gQ9ESN1 387 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 PapolbQ9WVP6 641 aa10.11□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Tp53P02340 387 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Rasgrf2P70392 1189 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 4930430A15RikQ05AC5 485 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Fam172aQ3TNH5 417 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Capn11Q6J756 714 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Arhgap10Q6Y5D8 786 aa10.1□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms