RNA–Protein interactions for RNA: snR11

snR11, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR11, Length 258 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR11snR11 LCL1Q02786 101 aa1.5□□□□□ -2.17
snR11snR11 YDR029WQ12111 104 aa1.5□□□□□ -2.17
snR11snR11 SLH1P53327 1967 aaKnown RBP1.49□□□□□ -2.17
snR11snR11 MRPL31P14063 131 aaPredicted RBP1.49□□□□□ -2.17
snR11snR11 MSL1P40567 111 aaPredicted RBP1.49□□□□□ -2.17
snR11snR11 YDR210WQ03482 75 aa1.49□□□□□ -2.17
snR11snR11 YGL041C-BQ3E750 60 aa1.49□□□□□ -2.17
snR11snR11 YGR240C-AQ3E786 66 aa1.49□□□□□ -2.17
snR11snR11 HUG1Q6Q5K6 68 aa1.49□□□□□ -2.17
snR11snR11 RSF2P46974 1380 aa1.48□□□□□ -2.17
snR11snR11 CCW14O13547 238 aa1.48□□□□□ -2.17
snR11snR11 ROX3P25046 220 aa1.48□□□□□ -2.17
snR11snR11 YIL102CP40488 101 aa1.48□□□□□ -2.17
snR11snR11 YOR072WQ08486 104 aa1.48□□□□□ -2.17
snR11snR11 YCL048W-AQ2V2Q2 79 aa1.48□□□□□ -2.17
snR11snR11 TY4B-JP47024 1803 aa1.47□□□□□ -2.17
snR11snR11 MVB12P42939 101 aa1.47□□□□□ -2.17
snR11snR11 YMR082CQ04276 118 aa1.47□□□□□ -2.17
snR11snR11 YOL118CQ08259 102 aa1.47□□□□□ -2.17
snR11snR11 YCR095W-AQ3E787 52 aa1.47□□□□□ -2.17
snR11snR11 PDR10P51533 1564 aa1.47□□□□□ -2.17
snR11snR11 PAU6P0CE90 120 aa1.46□□□□□ -2.18
snR11snR11 PAU18P0CE91 120 aa1.46□□□□□ -2.18
snR11snR11 YHL005CP38752 130 aa1.46□□□□□ -2.18
snR11snR11 GCV3P39726 170 aaPredicted RBP1.46□□□□□ -2.18
snR11snR11 SNU13P39990 126 aaKnown RBP1.46□□□□□ -2.18
snR11snR11 YDR042CQ03205 200 aa1.46□□□□□ -2.18
snR11snR11 BNI1P41832 1953 aa1.46□□□□□ -2.18
snR11snR11 HFA1P32874 2273 aa1.46□□□□□ -2.18
snR11snR11 SRB6P32570 121 aa1.45□□□□□ -2.18
snR11snR11 MRPL38P35996 138 aaPredicted RBP1.44□□□□□ -2.18
snR11snR11 IMP2P46972 177 aa1.44□□□□□ -2.18
snR11snR11 RPL37AP49166 88 aaKnown RBP1.44□□□□□ -2.18
snR11snR11 YMR007WQ03675 126 aa1.44□□□□□ -2.18
snR11snR11 NHP10Q03435 203 aa1.43□□□□□ -2.18
snR11snR11 YSP2Q06681 1438 aa1.42□□□□□ -2.18
snR11snR11 YPL038W-AQ3E7B4 63 aa1.42□□□□□ -2.18
snR11snR11 YBL071CP38185 102 aa1.41□□□□□ -2.18
snR11snR11 SPC1P46965 94 aa1.41□□□□□ -2.18
snR11snR11 ICY1Q04329 127 aa1.41□□□□□ -2.18
snR11snR11 BPT1P14772 1559 aa1.41□□□□□ -2.18
snR11snR11 YPK9Q12697 1472 aa1.4□□□□□ -2.19
snR11snR11 ECM12O13529 151 aa1.4□□□□□ -2.19
snR11snR11 MRP17P28778 131 aa1.4□□□□□ -2.19
snR11snR11 RSM18P40033 138 aa1.4□□□□□ -2.19
snR11snR11 YJR128WP47162 119 aa1.4□□□□□ -2.19
snR11snR11 SNA2P56508 79 aa1.39□□□□□ -2.19
snR11snR11 YNR034W-AQ3E841 98 aa1.39□□□□□ -2.19
snR11snR11 SUS1Q6WNK7 96 aa1.39□□□□□ -2.19
snR11snR11 YHR213W-BQ8TGK1 99 aa1.39□□□□□ -2.19
snR11snR11 RPA190P10964 1664 aaKnown RBP1.39□□□□□ -2.19
snR11snR11 YMR141CP40211 102 aa1.38□□□□□ -2.19
snR11snR11 YKL068W-AQ3E826 78 aa1.38□□□□□ -2.19
snR11snR11 LTE1P07866 1435 aa1.38□□□□□ -2.19
snR11snR11 YMR175W-AQ3E766 64 aa1.37□□□□□ -2.19
snR11snR11 LAA1P39526 2014 aa1.37□□□□□ -2.19
snR11snR11 POL1P13382 1468 aa1.37□□□□□ -2.19
snR11snR11 SRB8P25648 1427 aa1.36□□□□□ -2.19
snR11snR11 NHP2P32495 156 aaPredicted RBP1.36□□□□□ -2.19
snR11snR11 SEC16P48415 2195 aaKnown RBP1.35□□□□□ -2.19
snR11snR11 SEC7P11075 2009 aaKnown RBP1.35□□□□□ -2.19
snR11snR11 YOR034C-AQ3E735 80 aa1.35□□□□□ -2.19
snR11snR11 GDB1Q06625 1536 aa1.35□□□□□ -2.19
snR11snR11 PAU8P0CE92 120 aa1.34□□□□□ -2.19
snR11snR11 PAU11P0CE93 120 aa1.34□□□□□ -2.19
snR11snR11 AUA1P32450 94 aa1.34□□□□□ -2.19
snR11snR11 PAU13P38725 120 aa1.34□□□□□ -2.19
snR11snR11 CWP2P43497 92 aa1.34□□□□□ -2.19
snR11snR11 PAU4P53427 120 aa1.34□□□□□ -2.19
snR11snR11 MRX7P53869 86 aa1.34□□□□□ -2.19
snR11snR11 COX12Q01519 83 aa1.34□□□□□ -2.19
snR11snR11 PAU10Q03050 120 aa1.34□□□□□ -2.19
snR11snR11 PAU9Q3E770 120 aa1.34□□□□□ -2.19
snR11snR11 MYO1P08964 1928 aa1.33□□□□□ -2.2
snR11snR11 RPS11AP0CX47 156 aaKnown RBP1.33□□□□□ -2.2
snR11snR11 RPS11BP0CX48 156 aaKnown RBP1.33□□□□□ -2.2
snR11snR11 SHU1P38751 150 aa1.33□□□□□ -2.2
snR11snR11 YIL086CP40503 102 aa1.33□□□□□ -2.2
snR11snR11 URB1P34241 1764 aaKnown RBP1.32□□□□□ -2.2
snR11snR11 MPC2P38857 129 aa1.31□□□□□ -2.2
snR11snR11 POC4Q12245 148 aaPredicted RBP1.31□□□□□ -2.2
snR11snR11 ESC1Q03661 1658 aaKnown RBP1.31□□□□□ -2.2
snR11snR11 SWR1Q05471 1514 aa1.3□□□□□ -2.2
snR11snR11 RPL37BP51402 88 aaKnown RBP1.3□□□□□ -2.2
snR11snR11 PAU1P0CE88 120 aa1.29□□□□□ -2.2
snR11snR11 PAU14P0CE89 120 aa1.29□□□□□ -2.2
snR11snR11 AIM19P40502 157 aa1.29□□□□□ -2.2
snR11snR11 PAU20Q08322 120 aa1.29□□□□□ -2.2
snR11snR11 URA2P07259 2214 aaKnown RBP1.28□□□□□ -2.2
snR11snR11 RPL43AP0CX25 92 aaKnown RBP1.28□□□□□ -2.2
snR11snR11 RPL43BP0CX26 92 aa1.28□□□□□ -2.2
snR11snR11 COX19Q3E731 98 aa1.28□□□□□ -2.2
snR11snR11 MHF2Q3E829 80 aa1.28□□□□□ -2.2
snR11snR11 BRR2P32639 2163 aaKnown RBP1.28□□□□□ -2.2
snR11snR11 YCR085WP25650 117 aa1.27□□□□□ -2.21
snR11snR11 RPA12P32529 125 aaKnown RBP1.27□□□□□ -2.21
snR11snR11 YLR307C-AQ3E825 87 aa1.26□□□□□ -2.21
snR11snR11 YLR157W-EP0CF00 54 aa1.25□□□□□ -2.21
snR11snR11 YRF1-1P0CX20 1796 aa1.25□□□□□ -2.21
snR11snR11 YRF1-5P0CX21 1796 aa1.25□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 51.4 ms