RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W YLR118CQ12354 227 aa-0.5□□□□□ -2.49
VAM3YOR106W COX19Q3E731 98 aa-0.5□□□□□ -2.49
VAM3YOR106W YCR101CP25607 182 aa-0.51□□□□□ -2.49
VAM3YOR106W GTT1P40582 234 aa-0.51□□□□□ -2.49
VAM3YOR106W TY1B-BLQ12490 1755 aa-0.52□□□□□ -2.49
VAM3YOR106W PAU15P40585 124 aa-0.52□□□□□ -2.49
VAM3YOR106W YRF1-2P40105 1681 aa-0.53□□□□□ -2.49
VAM3YOR106W YHR138CP38841 114 aaPredicted RBP-0.53□□□□□ -2.49
VAM3YOR106W RPC10P40422 70 aa-0.53□□□□□ -2.49
VAM3YOR106W AIM11P87275 137 aa-0.53□□□□□ -2.49
VAM3YOR106W YDR210WQ03482 75 aa-0.53□□□□□ -2.49
VAM3YOR106W YLR365WQ7LIF2 110 aa-0.53□□□□□ -2.49
VAM3YOR106W PAU16P35994 123 aa-0.54□□□□□ -2.5
VAM3YOR106W YIR021W-AQ3E739 70 aa-0.54□□□□□ -2.5
VAM3YOR106W VMA7P39111 118 aa-0.55□□□□□ -2.5
VAM3YOR106W YGR164WP53291 111 aa-0.55□□□□□ -2.5
VAM3YOR106W YLR042CQ07990 161 aa-0.55□□□□□ -2.5
VAM3YOR106W YBR016WP38216 128 aa-0.56□□□□□ -2.5
VAM3YOR106W MRX7P53869 86 aa-0.56□□□□□ -2.5
VAM3YOR106W YIL134C-AQ45U18 67 aa-0.56□□□□□ -2.5
VAM3YOR106W COX12Q01519 83 aa-0.57□□□□□ -2.5
VAM3YOR106W BUD23P25627 275 aaPredicted RBP-0.58□□□□□ -2.5
VAM3YOR106W SRB6P32570 121 aa-0.58□□□□□ -2.5
VAM3YOR106W YJR107C-AP0CT86 78 aa-0.59□□□□□ -2.5
VAM3YOR106W MRPL38P35996 138 aaPredicted RBP-0.6□□□□□ -2.51
VAM3YOR106W RTR2Q12378 196 aa-0.6□□□□□ -2.51
VAM3YOR106W YLR419WQ06698 1435 aaKnown RBP-0.61□□□□□ -2.51
VAM3YOR106W ICY1Q04329 127 aa-0.61□□□□□ -2.51
VAM3YOR106W HUR1P45820 110 aa-0.62□□□□□ -2.51
VAM3YOR106W SPC2Q04969 178 aa-0.62□□□□□ -2.51
VAM3YOR106W SSN2P38931 1420 aa-0.63□□□□□ -2.51
VAM3YOR106W RSM18P40033 138 aa-0.63□□□□□ -2.51
VAM3YOR106W VMA21P41806 77 aa-0.63□□□□□ -2.51
VAM3YOR106W SNA2P56508 79 aa-0.63□□□□□ -2.51
VAM3YOR106W PAU20Q08322 120 aa-0.63□□□□□ -2.51
VAM3YOR106W YCR095W-AQ3E787 52 aa-0.63□□□□□ -2.51
VAM3YOR106W YRF1-1P0CX20 1796 aa-0.63□□□□□ -2.51
VAM3YOR106W YRF1-5P0CX21 1796 aa-0.63□□□□□ -2.51
VAM3YOR106W YRF1-8P0CX22 1796 aa-0.63□□□□□ -2.51
VAM3YOR106W RSF2P46974 1380 aa-0.65□□□□□ -2.51
VAM3YOR106W PAU6P0CE90 120 aa-0.65□□□□□ -2.51
VAM3YOR106W PAU18P0CE91 120 aa-0.65□□□□□ -2.51
VAM3YOR106W SRB8P25648 1427 aa-0.65□□□□□ -2.51
VAM3YOR106W CAT8P39113 1433 aa-0.65□□□□□ -2.51
VAM3YOR106W UTP20P35194 2493 aaKnown RBP-0.66□□□□□ -2.51
VAM3YOR106W YBR292CP38357 123 aa-0.66□□□□□ -2.52
VAM3YOR106W APS2Q00381 147 aa-0.67□□□□□ -2.52
VAM3YOR106W YNR034W-AQ3E841 98 aa-0.67□□□□□ -2.52
VAM3YOR106W TY1B-LR3P0C2I6 1755 aaKnown RBP-0.68□□□□□ -2.52
VAM3YOR106W TY1B-PR3P0C2J1 1755 aaKnown RBP-0.68□□□□□ -2.52
VAM3YOR106W MRP17P28778 131 aa-0.69□□□□□ -2.52
VAM3YOR106W WIP1Q2V2P8 89 aa-0.69□□□□□ -2.52
VAM3YOR106W RPL38P49167 78 aaKnown RBP-0.7□□□□□ -2.52
VAM3YOR106W SWC7Q06707 132 aa-0.71□□□□□ -2.52
VAM3YOR106W NTE1Q04958 1679 aa-0.72□□□□□ -2.52
VAM3YOR106W YBL071CP38185 102 aa-0.72□□□□□ -2.52
VAM3YOR106W PAU5P43575 122 aa-0.72□□□□□ -2.52
VAM3YOR106W YCR108CQ3E819 63 aa-0.72□□□□□ -2.52
VAM3YOR106W KRE5P22023 1365 aa-0.72□□□□□ -2.53
VAM3YOR106W PAU1P0CE88 120 aa-0.73□□□□□ -2.53
VAM3YOR106W PAU14P0CE89 120 aa-0.73□□□□□ -2.53
VAM3YOR106W PAU8P0CE92 120 aa-0.73□□□□□ -2.53
VAM3YOR106W PAU11P0CE93 120 aa-0.73□□□□□ -2.53
VAM3YOR106W PAU13P38725 120 aa-0.73□□□□□ -2.53
VAM3YOR106W PAU10Q03050 120 aa-0.73□□□□□ -2.53
VAM3YOR106W PAU9Q3E770 120 aa-0.73□□□□□ -2.53
VAM3YOR106W SEN1Q00416 2231 aaKnown RBP-0.74□□□□□ -2.53
VAM3YOR106W ROX3P25046 220 aa-0.74□□□□□ -2.53
VAM3YOR106W MIC10Q96VH5 97 aa-0.74□□□□□ -2.53
VAM3YOR106W BUD4P47136 1447 aa-0.74□□□□□ -2.53
VAM3YOR106W PDX3P38075 228 aaKnown RBP-0.76□□□□□ -2.53
VAM3YOR106W LYS2P07702 1392 aa-0.76□□□□□ -2.53
VAM3YOR106W AIM19P40502 157 aa-0.77□□□□□ -2.53
VAM3YOR106W YDR381C-AQ3E6R5 114 aa-0.77□□□□□ -2.53
VAM3YOR106W TY1B-BRQ12193 1756 aa-0.78□□□□□ -2.53
VAM3YOR106W YOS1Q3E834 85 aa-0.78□□□□□ -2.53
VAM3YOR106W PAU4P53427 120 aa-0.79□□□□□ -2.54
VAM3YOR106W Q0032Q9ZZX7 96 aa-0.79□□□□□ -2.54
VAM3YOR106W YER039C-AP0CD97 72 aa-0.8□□□□□ -2.54
VAM3YOR106W COX7P10174 60 aa-0.8□□□□□ -2.54
VAM3YOR106W MIX14Q04341 121 aa-0.81□□□□□ -2.54
VAM3YOR106W YPR117WQ06116 2489 aa-0.81□□□□□ -2.54
VAM3YOR106W SPP41P38904 1435 aa-0.81□□□□□ -2.54
VAM3YOR106W BPT1P14772 1559 aa-0.82□□□□□ -2.54
VAM3YOR106W SPC1P46965 94 aa-0.82□□□□□ -2.54
VAM3YOR106W HKR1P41809 1802 aa-0.82□□□□□ -2.54
VAM3YOR106W TEL1P38110 2787 aa-0.83□□□□□ -2.54
VAM3YOR106W YNL042W-BQ3E7Z2 85 aa-0.83□□□□□ -2.54
VAM3YOR106W TOR1P35169 2470 aa-0.84□□□□□ -2.54
VAM3YOR106W GNA1P43577 159 aaPredicted RBP-0.84□□□□□ -2.54
VAM3YOR106W RSM19P53733 91 aaPredicted RBP-0.84□□□□□ -2.54
VAM3YOR106W NHP10Q03435 203 aa-0.84□□□□□ -2.54
VAM3YOR106W GCN1P33892 2672 aaKnown RBP-0.85□□□□□ -2.55
VAM3YOR106W YOR304C-AO14468 76 aa-0.85□□□□□ -2.55
VAM3YOR106W UBC4P15731 148 aa-0.85□□□□□ -2.55
VAM3YOR106W YMR103CQ04436 120 aa-0.85□□□□□ -2.55
VAM3YOR106W TOR2P32600 2474 aaKnown RBP-0.86□□□□□ -2.55
VAM3YOR106W BPH1P25356 2167 aa-0.86□□□□□ -2.55
VAM3YOR106W YBR201C-AQ2V2Q3 67 aa-0.86□□□□□ -2.55
VAM3YOR106W PMD1P32634 1753 aa-0.87□□□□□ -2.55
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms