RNA–Protein interactions for RNA: YNR070W

PDR18, Transcript of Putative transporter of the ATP-binding cassette (ABC) family, yeast

Gene PDR18, Length 4,002 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR18	YNR070W	YAR023C	D6VPM8	179 aa		4.78	□□□□□ -1.64
PDR18	YNR070W	PEX17	P40155	199 aa		4.78	□□□□□ -1.64
PDR18	YNR070W	RPL38	P49167	78 aa	Known RBP	4.78	□□□□□ -1.64
PDR18	YNR070W	RPL26A	P05743	127 aa	Known RBP	4.78	□□□□□ -1.64
PDR18	YNR070W	YHR213W	P0CI67	198 aa		4.78	□□□□□ -1.64
PDR18	YNR070W	RPL16B	P26785	198 aa	Known RBP	4.78	□□□□□ -1.64
PDR18	YNR070W	RPL26B	P53221	127 aa	Known RBP	4.78	□□□□□ -1.64
PDR18	YNR070W	YIL014C-A	Q02598	104 aa		4.78	□□□□□ -1.64
PDR18	YNR070W	YHL037C	P38733	133 aa		4.78	□□□□□ -1.64
PDR18	YNR070W	HAL1	Q01766	294 aa		4.77	□□□□□ -1.65
PDR18	YNR070W	SGF11	Q03067	99 aa		4.77	□□□□□ -1.65
PDR18	YNR070W	MHR1	Q06630	226 aa		4.77	□□□□□ -1.65
PDR18	YNR070W	ENV10	Q99382	181 aa		4.77	□□□□□ -1.65
PDR18	YNR070W	GCN1	P33892	2672 aa	Known RBP	4.77	□□□□□ -1.65
PDR18	YNR070W	MIG3	P39943	394 aa		4.77	□□□□□ -1.65
PDR18	YNR070W	HUR1	P45820	110 aa		4.77	□□□□□ -1.65
PDR18	YNR070W	YKL044W	P36092	106 aa		4.76	□□□□□ -1.65
PDR18	YNR070W	YHR022C	P38763	256 aa		4.76	□□□□□ -1.65
PDR18	YNR070W	ERI1	P62651	68 aa	Known RBP	4.76	□□□□□ -1.65
PDR18	YNR070W	YHR212W-A	P0CX91	67 aa		4.76	□□□□□ -1.65
PDR18	YNR070W	RPL16A	P26784	199 aa	Known RBP	4.76	□□□□□ -1.65
PDR18	YNR070W	ARC15	P40518	154 aa	RIP-Chip data	4.76	□□□□□ -1.65	not detected
PDR18	YNR070W	CRC1	Q12289	327 aa		4.76	□□□□□ -1.65
PDR18	YNR070W	CCW12	Q12127	133 aa		4.75	□□□□□ -1.65
PDR18	YNR070W	SRP14	P38985	146 aa		4.75	□□□□□ -1.65
PDR18	YNR070W	SNA4	Q07549	140 aa		4.75	□□□□□ -1.65
PDR18	YNR070W	GLE2	P40066	365 aa		4.75	□□□□□ -1.65
PDR18	YNR070W	YFR057W	P43625	151 aa		4.75	□□□□□ -1.65
PDR18	YNR070W	ATG33	Q06485	197 aa		4.75	□□□□□ -1.65
PDR18	YNR070W	SEC11	P15367	167 aa		4.75	□□□□□ -1.65
PDR18	YNR070W	YIA6	P40556	373 aa		4.75	□□□□□ -1.65
PDR18	YNR070W	MRPL23	Q12487	163 aa	Predicted RBP	4.75	□□□□□ -1.65
PDR18	YNR070W	AGA1	P32323	725 aa		4.74	□□□□□ -1.65
PDR18	YNR070W	BET5	Q03630	159 aa		4.74	□□□□□ -1.65
PDR18	YNR070W	MPC2	P38857	129 aa		4.74	□□□□□ -1.65
PDR18	YNR070W	PBI2	P0CT04	75 aa	Known RBP	4.73	□□□□□ -1.65
PDR18	YNR070W	COF1	Q03048	143 aa	Known RBP	4.73	□□□□□ -1.65
PDR18	YNR070W	YBL029C-A	Q3E756	94 aa		4.73	□□□□□ -1.65
PDR18	YNR070W	CWP2	P43497	92 aa		4.73	□□□□□ -1.65
PDR18	YNR070W	VAM10	Q08474	114 aa		4.73	□□□□□ -1.65
PDR18	YNR070W	POP7	P38291	140 aa		4.73	□□□□□ -1.65
PDR18	YNR070W	YPS5	P53057	165 aa		4.73	□□□□□ -1.65
PDR18	YNR070W	YDL157C	Q12082	118 aa		4.73	□□□□□ -1.65
PDR18	YNR070W	MSN1	P22148	382 aa		4.72	□□□□□ -1.65
PDR18	YNR070W	AIM11	P87275	137 aa		4.72	□□□□□ -1.65
PDR18	YNR070W	Q0297	Q9ZZV8	51 aa		4.72	□□□□□ -1.65
PDR18	YNR070W	YKR041W	P36134	250 aa		4.72	□□□□□ -1.65
PDR18	YNR070W	SPC1	P46965	94 aa		4.72	□□□□□ -1.65
PDR18	YNR070W	YMR244W	Q04018	355 aa		4.72	□□□□□ -1.65
PDR18	YNR070W	EMC6	Q12431	108 aa		4.72	□□□□□ -1.65
PDR18	YNR070W	YNL146C-A	Q3E7Z1	64 aa		4.72	□□□□□ -1.65
PDR18	YNR070W	PFY1	P07274	126 aa		4.71	□□□□□ -1.65
PDR18	YNR070W	YKL102C	P34249	101 aa		4.71	□□□□□ -1.65
PDR18	YNR070W	MIC12	P38341	106 aa		4.71	□□□□□ -1.65
PDR18	YNR070W	TDA2	P40045	126 aa		4.71	□□□□□ -1.65
PDR18	YNR070W	LSM6	Q06406	86 aa	Known RBP	4.71	□□□□□ -1.66
PDR18	YNR070W	YPR010C-A	A5Z2X5	72 aa		4.71	□□□□□ -1.66
PDR18	YNR070W	AQY1	P0CD91	305 aa		4.71	□□□□□ -1.66
PDR18	YNR070W	UTR5	P32630	166 aa		4.71	□□□□□ -1.66
PDR18	YNR070W	YKR045C	P36138	183 aa		4.71	□□□□□ -1.66
PDR18	YNR070W	CIN5	P40917	295 aa		4.71	□□□□□ -1.66
PDR18	YNR070W	WWM1	P43582	211 aa	Known RBP	4.71	□□□□□ -1.66
PDR18	YNR070W	YKR032W	P36127	104 aa		4.7	□□□□□ -1.66
PDR18	YNR070W	YIL102C-A	Q2V2P5	75 aa		4.7	□□□□□ -1.66
PDR18	YNR070W	MRPS8	Q03799	155 aa		4.7	□□□□□ -1.66
PDR18	YNR070W	YPR013C	Q12145	317 aa		4.7	□□□□□ -1.66
PDR18	YNR070W	YBR200W-A	Q3E755	54 aa		4.7	□□□□□ -1.66
PDR18	YNR070W	RAD6	P06104	172 aa		4.7	□□□□□ -1.66
PDR18	YNR070W	QCR8	P08525	94 aa		4.7	□□□□□ -1.66
PDR18	YNR070W	YGR025W	P53216	100 aa		4.7	□□□□□ -1.66
PDR18	YNR070W	YMR317W	Q04893	1140 aa		4.7	□□□□□ -1.66
PDR18	YNR070W	SOH1	P38633	127 aa		4.69	□□□□□ -1.66
PDR18	YNR070W	YCH1	P42937	148 aa		4.69	□□□□□ -1.66
PDR18	YNR070W	YDR042C	Q03205	200 aa		4.69	□□□□□ -1.66
PDR18	YNR070W	TOM1	Q03280	3268 aa		4.69	□□□□□ -1.66
PDR18	YNR070W	AIR2	Q12476	344 aa	Known RBP	4.69	□□□□□ -1.66
PDR18	YNR070W	KRE1	P17260	313 aa		4.69	□□□□□ -1.66
PDR18	YNR070W	NRG2	P38082	220 aa		4.69	□□□□□ -1.66
PDR18	YNR070W	YNL190W	P53872	204 aa		4.69	□□□□□ -1.66
PDR18	YNR070W	YMR295C	Q03559	197 aa		4.69	□□□□□ -1.66
PDR18	YNR070W	YAL064W	P39711	94 aa		4.68	□□□□□ -1.66
PDR18	YNR070W	TMA10	Q06177	86 aa		4.68	□□□□□ -1.66
PDR18	YNR070W	PET8	P38921	284 aa		4.68	□□□□□ -1.66
PDR18	YNR070W	DFM1	Q12743	341 aa	Known RBP	4.68	□□□□□ -1.66
PDR18	YNR070W	AQY2	P0CD90	149 aa		4.68	□□□□□ -1.66
PDR18	YNR070W	UGX2	P32772	223 aa		4.68	□□□□□ -1.66
PDR18	YNR070W	VTC1	P40046	129 aa	RIP-Chip data	4.68	□□□□□ -1.66	not detected
PDR18	YNR070W	COX12	Q01519	83 aa		4.67	□□□□□ -1.66
PDR18	YNR070W	KTI11	Q3E840	82 aa		4.67	□□□□□ -1.66
PDR18	YNR070W	AIM19	P40502	157 aa		4.67	□□□□□ -1.66
PDR18	YNR070W	CUP1-1	P0CX80	61 aa		4.67	□□□□□ -1.66
PDR18	YNR070W	CUP1-2	P0CX81	61 aa		4.67	□□□□□ -1.66
PDR18	YNR070W	MRPL24	P36525	258 aa	Predicted RBP	4.67	□□□□□ -1.66
PDR18	YNR070W	YEL008W	P40001	126 aa		4.67	□□□□□ -1.66
PDR18	YNR070W	YIL102C	P40488	101 aa		4.67	□□□□□ -1.66
PDR18	YNR070W	YDR274C	P87283	123 aa		4.67	□□□□□ -1.66
PDR18	YNR070W	YOR097C	Q12274	175 aa	Predicted RBP	4.66	□□□□□ -1.66
PDR18	YNR070W	COX10	P21592	462 aa		4.66	□□□□□ -1.66
PDR18	YNR070W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
PDR18	YNR070W	TOS6	P48560	102 aa		4.66	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 7.1 ms