RNA–Protein interactions for RNA: YMR064W

AEP1, Transcript of Protein required for expression of the mitochondrial OLI1 gene, yeast

Gene AEP1, Length 1,557 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AEP1	YMR064W	SWC7	Q06707	132 aa		0.57	□□□□□ -2.32
AEP1	YMR064W	SPP41	P38904	1435 aa		0.56	□□□□□ -2.32
AEP1	YMR064W	YIL086C	P40503	102 aa		0.56	□□□□□ -2.32
AEP1	YMR064W	CCW14	O13547	238 aa		0.55	□□□□□ -2.32
AEP1	YMR064W	SHU1	P38751	150 aa		0.55	□□□□□ -2.32
AEP1	YMR064W	POL2	P21951	2222 aa	Known RBP	0.55	□□□□□ -2.32
AEP1	YMR064W	MYO1	P08964	1928 aa		0.54	□□□□□ -2.32
AEP1	YMR064W	RUB1	Q03919	77 aa		0.53	□□□□□ -2.32
AEP1	YMR064W	TOP2	P06786	1428 aa	Known RBP	0.53	□□□□□ -2.32
AEP1	YMR064W	YLR419W	Q06698	1435 aa	Known RBP	0.53	□□□□□ -2.32
AEP1	YMR064W	SRB6	P32570	121 aa		0.53	□□□□□ -2.33
AEP1	YMR064W	YDR210W	Q03482	75 aa		0.52	□□□□□ -2.33
AEP1	YMR064W	YPL038W-A	Q3E7B4	63 aa		0.52	□□□□□ -2.33
AEP1	YMR064W	LHP1	P33399	275 aa	Known RBP	0.51	□□□□□ -2.33
AEP1	YMR064W	COX19	Q3E731	98 aa		0.51	□□□□□ -2.33
AEP1	YMR064W	MIC10	Q96VH5	97 aa		0.51	□□□□□ -2.33
AEP1	YMR064W	MPC2	P38857	129 aa		0.5	□□□□□ -2.33
AEP1	YMR064W	GNA1	P43577	159 aa	Predicted RBP	0.5	□□□□□ -2.33
AEP1	YMR064W	YOS1	Q3E834	85 aa		0.5	□□□□□ -2.33
AEP1	YMR064W	YCR101C	P25607	182 aa		0.49	□□□□□ -2.33
AEP1	YMR064W	LYS2	P07702	1392 aa		0.49	□□□□□ -2.33
AEP1	YMR064W	YMR103C	Q04436	120 aa		0.49	□□□□□ -2.33
AEP1	YMR064W	COX12	Q01519	83 aa		0.48	□□□□□ -2.33
AEP1	YMR064W	RPA12	P32529	125 aa	Known RBP	0.47	□□□□□ -2.33
AEP1	YMR064W	UBC4	P15731	148 aa		0.45	□□□□□ -2.34
AEP1	YMR064W	YCR095W-A	Q3E787	52 aa		0.45	□□□□□ -2.34
AEP1	YMR064W	RPS12	P48589	143 aa	Known RBP	0.45	□□□□□ -2.34
AEP1	YMR064W	YMR090W	Q04304	227 aa	Known RBP	0.45	□□□□□ -2.34
AEP1	YMR064W	KRE5	P22023	1365 aa		0.44	□□□□□ -2.34
AEP1	YMR064W	TAO3	P40468	2376 aa		0.44	□□□□□ -2.34
AEP1	YMR064W	RPS11A	P0CX47	156 aa	Known RBP	0.44	□□□□□ -2.34
AEP1	YMR064W	RPS11B	P0CX48	156 aa	Known RBP	0.44	□□□□□ -2.34
AEP1	YMR064W	YER137C	P40083	148 aa	Known RBP	0.43	□□□□□ -2.34
AEP1	YMR064W	MRX7	P53869	86 aa		0.43	□□□□□ -2.34
AEP1	YMR064W	SNA2	P56508	79 aa		0.43	□□□□□ -2.34
AEP1	YMR064W	PAU5	P43575	122 aa		0.42	□□□□□ -2.34
AEP1	YMR064W	YNL190W	P53872	204 aa		0.42	□□□□□ -2.34
AEP1	YMR064W	SRB8	P25648	1427 aa		0.41	□□□□□ -2.34
AEP1	YMR064W	ICY1	Q04329	127 aa		0.41	□□□□□ -2.34
AEP1	YMR064W	TSC11	P40061	1430 aa		0.41	□□□□□ -2.34
AEP1	YMR064W	MRPL38	P35996	138 aa	Predicted RBP	0.4	□□□□□ -2.34
AEP1	YMR064W	YBR090C	P38253	122 aa		0.4	□□□□□ -2.34
AEP1	YMR064W	PAU6	P0CE90	120 aa		0.4	□□□□□ -2.35
AEP1	YMR064W	PAU18	P0CE91	120 aa		0.4	□□□□□ -2.35
AEP1	YMR064W	UBC5	P15732	148 aa		0.4	□□□□□ -2.35
AEP1	YMR064W	MRP17	P28778	131 aa		0.39	□□□□□ -2.35
AEP1	YMR064W	ROX3	P25046	220 aa		0.38	□□□□□ -2.35
AEP1	YMR064W	MIX14	Q04341	121 aa		0.38	□□□□□ -2.35
AEP1	YMR064W	SSN2	P38931	1420 aa		0.38	□□□□□ -2.35
AEP1	YMR064W	RGI1	P40043	161 aa	Predicted RBP	0.37	□□□□□ -2.35
AEP1	YMR064W	RSM19	P53733	91 aa	Predicted RBP	0.37	□□□□□ -2.35
AEP1	YMR064W	PAU20	Q08322	120 aa		0.37	□□□□□ -2.35
AEP1	YMR064W	YNR034W-A	Q3E841	98 aa		0.37	□□□□□ -2.35
AEP1	YMR064W	RIM15	P43565	1770 aa		0.37	□□□□□ -2.35
AEP1	YMR064W	YBR292C	P38357	123 aa		0.36	□□□□□ -2.35
AEP1	YMR064W	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.36	□□□□□ -2.35
AEP1	YMR064W	RSM18	P40033	138 aa		0.35	□□□□□ -2.35
AEP1	YMR064W	BPT1	P14772	1559 aa		0.34	□□□□□ -2.35
AEP1	YMR064W	YBL071C	P38185	102 aa		0.34	□□□□□ -2.36
AEP1	YMR064W	KSH1	Q8TGJ3	72 aa		0.34	□□□□□ -2.36
AEP1	YMR064W	GEA1	P47102	1408 aa	Predicted RBP	0.33	□□□□□ -2.36
AEP1	YMR064W	YNL198C	P40166	100 aa		0.33	□□□□□ -2.36
AEP1	YMR064W	RPC10	P40422	70 aa		0.33	□□□□□ -2.36
AEP1	YMR064W	AIM19	P40502	157 aa		0.32	□□□□□ -2.36
AEP1	YMR064W	YOR289W	Q12012	251 aa	Predicted RBP	0.32	□□□□□ -2.36
AEP1	YMR064W	PAU1	P0CE88	120 aa		0.32	□□□□□ -2.36
AEP1	YMR064W	PAU14	P0CE89	120 aa		0.32	□□□□□ -2.36
AEP1	YMR064W	PAU8	P0CE92	120 aa		0.32	□□□□□ -2.36
AEP1	YMR064W	PAU11	P0CE93	120 aa		0.32	□□□□□ -2.36
AEP1	YMR064W	PAU13	P38725	120 aa		0.32	□□□□□ -2.36
AEP1	YMR064W	YHL005C	P38752	130 aa		0.32	□□□□□ -2.36
AEP1	YMR064W	PAU10	Q03050	120 aa		0.32	□□□□□ -2.36
AEP1	YMR064W	PAU9	Q3E770	120 aa		0.32	□□□□□ -2.36
AEP1	YMR064W	MDS3	P53094	1487 aa		0.31	□□□□□ -2.36
AEP1	YMR064W	YRF1-1	P0CX20	1796 aa		0.31	□□□□□ -2.36
AEP1	YMR064W	YRF1-5	P0CX21	1796 aa		0.31	□□□□□ -2.36
AEP1	YMR064W	YRF1-8	P0CX22	1796 aa		0.31	□□□□□ -2.36
AEP1	YMR064W	PDR11	P40550	1411 aa		0.3	□□□□□ -2.36
AEP1	YMR064W	TY1B-BL	Q12490	1755 aa		0.3	□□□□□ -2.36
AEP1	YMR064W	YRF1-2	P40105	1681 aa		0.3	□□□□□ -2.36
AEP1	YMR064W	NTE1	Q04958	1679 aa		0.3	□□□□□ -2.36
AEP1	YMR064W	HMRA1	P0CY11	126 aa		0.3	□□□□□ -2.36
AEP1	YMR064W	EMC5	P40540	141 aa		0.29	□□□□□ -2.36
AEP1	YMR064W	SPC1	P46965	94 aa		0.28	□□□□□ -2.36
AEP1	YMR064W	NHP10	Q03435	203 aa		0.28	□□□□□ -2.36
AEP1	YMR064W	ATX1	P38636	73 aa		0.28	□□□□□ -2.37
AEP1	YMR064W	PAU4	P53427	120 aa		0.28	□□□□□ -2.37
AEP1	YMR064W	GEA2	P39993	1459 aa	Known RBP	0.27	□□□□□ -2.37
AEP1	YMR064W	FYV7	Q12247	151 aa		0.26	□□□□□ -2.37
AEP1	YMR064W	RRT15	Q3E811	62 aa		0.25	□□□□□ -2.37
AEP1	YMR064W	YFR009W-A	P0C5M9	85 aa		0.24	□□□□□ -2.37
AEP1	YMR064W	YJR107C-A	P0CT86	78 aa		0.24	□□□□□ -2.37
AEP1	YMR064W	YBR016W	P38216	128 aa		0.24	□□□□□ -2.37
AEP1	YMR064W	CAT8	P39113	1433 aa		0.23	□□□□□ -2.37
AEP1	YMR064W	REV3	P14284	1504 aa		0.23	□□□□□ -2.37
AEP1	YMR064W	RPL38	P49167	78 aa	Known RBP	0.23	□□□□□ -2.37
AEP1	YMR064W	RSF2	P46974	1380 aa		0.2	□□□□□ -2.38
AEP1	YMR064W	SNU13	P39990	126 aa	Known RBP	0.2	□□□□□ -2.38
AEP1	YMR064W	YNL042W-B	Q3E7Z2	85 aa		0.2	□□□□□ -2.38
AEP1	YMR064W	BUD4	P47136	1447 aa		0.2	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms