RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W YOL162WP0CF19 215 aa1.35□□□□□ -2.19
CFT2YLR115W YHL018WP38744 120 aaPredicted RBP1.35□□□□□ -2.19
CFT2YLR115W YHR138CP38841 114 aaPredicted RBP1.35□□□□□ -2.19
CFT2YLR115W SPO73P40031 143 aa1.35□□□□□ -2.19
CFT2YLR115W YER187WP40102 141 aa1.35□□□□□ -2.19
CFT2YLR115W SWM2P40342 146 aa1.35□□□□□ -2.19
CFT2YLR115W MPC3P53311 146 aa1.35□□□□□ -2.19
CFT2YLR115W NMA1Q06178 401 aaKnown RBP1.35□□□□□ -2.19
CFT2YLR115W YBR056W-AI2HB52 66 aa1.35□□□□□ -2.19
CFT2YLR115W YJL197C-AP0C5P0 93 aa1.35□□□□□ -2.19
CFT2YLR115W HMRA1P0CY11 126 aa1.35□□□□□ -2.19
CFT2YLR115W MRPL27P36526 146 aaPredicted RBP1.35□□□□□ -2.19
CFT2YLR115W YBR209WP38311 105 aa1.35□□□□□ -2.19
CFT2YLR115W YHL042WP38729 150 aa1.35□□□□□ -2.19
CFT2YLR115W PEP8P40335 379 aa1.35□□□□□ -2.19
CFT2YLR115W IRC19Q07843 230 aa1.35□□□□□ -2.19
CFT2YLR115W YOR381W-AQ3E804 55 aa1.35□□□□□ -2.19
CFT2YLR115W YOR376W-AQ3E805 51 aa1.35□□□□□ -2.19
CFT2YLR115W MLP1Q02455 1875 aaKnown RBP1.34□□□□□ -2.19
CFT2YLR115W RPS23AP0CX29 145 aaKnown RBP1.34□□□□□ -2.19
CFT2YLR115W RPS23BP0CX30 145 aa1.34□□□□□ -2.19
CFT2YLR115W YKR045CP36138 183 aa1.34□□□□□ -2.19
CFT2YLR115W PIN3Q06449 215 aa1.34□□□□□ -2.19
CFT2YLR115W DAD1Q12248 94 aa1.34□□□□□ -2.19
CFT2YLR115W MIC10Q96VH5 97 aa1.34□□□□□ -2.19
CFT2YLR115W CSF1Q12150 2958 aa1.34□□□□□ -2.2
CFT2YLR115W CYB5P40312 120 aa1.34□□□□□ -2.2
CFT2YLR115W EMC5P40540 141 aa1.34□□□□□ -2.2
CFT2YLR115W BRP1P53194 125 aa1.34□□□□□ -2.2
CFT2YLR115W YNR077CP53758 84 aa1.34□□□□□ -2.2
CFT2YLR115W GPI11Q06636 219 aa1.34□□□□□ -2.2
CFT2YLR115W SUS1Q6WNK7 96 aa1.34□□□□□ -2.2
CFT2YLR115W YLR236CA0A023PZG4 107 aa1.33□□□□□ -2.2
CFT2YLR115W RPS25BP0C0T4 108 aaKnown RBP1.33□□□□□ -2.2
CFT2YLR115W MRPS9P38120 278 aa1.33□□□□□ -2.2
CFT2YLR115W HSP10P38910 106 aa1.33□□□□□ -2.2
CFT2YLR115W DAN1P47178 298 aa1.33□□□□□ -2.2
CFT2YLR115W YIL014C-AQ02598 104 aa1.33□□□□□ -2.2
CFT2YLR115W YLR296WQ05898 108 aa1.33□□□□□ -2.2
CFT2YLR115W YPR195CQ06594 109 aa1.33□□□□□ -2.2
CFT2YLR115W YLR363W-AQ3E747 85 aa1.33□□□□□ -2.2
CFT2YLR115W INO4P13902 151 aa1.33□□□□□ -2.2
CFT2YLR115W YHR180WP38868 163 aa1.33□□□□□ -2.2
CFT2YLR115W RPL22BP56628 122 aaKnown RBP1.33□□□□□ -2.2
CFT2YLR115W YPL261CQ08976 102 aa1.33□□□□□ -2.2
CFT2YLR115W YMR175W-AQ3E766 64 aa1.33□□□□□ -2.2
CFT2YLR115W OST5Q92316 86 aa1.33□□□□□ -2.2
CFT2YLR115W KRE1P17260 313 aa1.32□□□□□ -2.2
CFT2YLR115W YCR085WP25650 117 aa1.32□□□□□ -2.2
CFT2YLR115W TOM6P33448 61 aa1.32□□□□□ -2.2
CFT2YLR115W HYR1P40581 163 aaKnown RBP1.32□□□□□ -2.2
CFT2YLR115W YDR042CQ03205 200 aa1.32□□□□□ -2.2
CFT2YLR115W YMR030W-AQ3E760 96 aa1.32□□□□□ -2.2
CFT2YLR115W RPS25AQ3E792 108 aaPredicted RBP1.32□□□□□ -2.2
CFT2YLR115W DYN1P36022 4092 aa1.32□□□□□ -2.2
CFT2YLR115W HFA1P32874 2273 aa1.32□□□□□ -2.2
CFT2YLR115W FUN14P18411 198 aa1.32□□□□□ -2.2
CFT2YLR115W DCV1P43595 202 aa1.32□□□□□ -2.2
CFT2YLR115W YDL241WQ07738 123 aa1.32□□□□□ -2.2
CFT2YLR115W ENV10Q99382 181 aa1.32□□□□□ -2.2
CFT2YLR115W RIF1P29539 1916 aa1.32□□□□□ -2.2
CFT2YLR115W YHR022CP38763 256 aa1.31□□□□□ -2.2
CFT2YLR115W GCV3P39726 170 aaPredicted RBP1.31□□□□□ -2.2
CFT2YLR115W HPA3P39979 161 aa1.31□□□□□ -2.2
CFT2YLR115W RTC6O14464 93 aa1.31□□□□□ -2.2
CFT2YLR115W PAI3P01094 68 aa1.31□□□□□ -2.2
CFT2YLR115W MAK31P23059 88 aa1.31□□□□□ -2.2
CFT2YLR115W YEL014CP39999 101 aa1.31□□□□□ -2.2
CFT2YLR115W POP3P53833 195 aaPredicted RBP1.31□□□□□ -2.2
CFT2YLR115W SML1Q04964 104 aa1.31□□□□□ -2.2
CFT2YLR115W YOR268CQ08734 132 aa1.31□□□□□ -2.2
CFT2YLR115W EMC6Q12431 108 aa1.31□□□□□ -2.2
CFT2YLR115W COX8P04039 78 aa1.3□□□□□ -2.2
CFT2YLR115W YHR213WP0CI67 198 aa1.3□□□□□ -2.2
CFT2YLR115W YHL037CP38733 133 aa1.3□□□□□ -2.2
CFT2YLR115W RSM18P40033 138 aa1.3□□□□□ -2.2
CFT2YLR115W YOL085CQ99345 113 aa1.3□□□□□ -2.2
CFT2YLR115W RPL36BO14455 100 aaKnown RBP1.3□□□□□ -2.2
CFT2YLR115W RPL36AP05745 100 aaPredicted RBP1.3□□□□□ -2.2
CFT2YLR115W YBR013CP38215 129 aa1.3□□□□□ -2.2
CFT2YLR115W SMD3P43321 101 aaKnown RBP1.3□□□□□ -2.2
CFT2YLR115W YFL065CP43539 102 aa1.3□□□□□ -2.2
CFT2YLR115W RGM1Q00453 211 aa1.3□□□□□ -2.2
CFT2YLR115W YOL118CQ08259 102 aa1.3□□□□□ -2.2
CFT2YLR115W PRM3Q08931 133 aa1.3□□□□□ -2.2
CFT2YLR115W YPR203WQ08994 102 aa1.3□□□□□ -2.2
CFT2YLR115W FLO9P39712 1322 aa1.3□□□□□ -2.2
CFT2YLR115W SEC11P15367 167 aa1.29□□□□□ -2.2
CFT2YLR115W YIR020CP40575 100 aa1.29□□□□□ -2.2
CFT2YLR115W YJL027CP47063 138 aaPredicted RBP1.29□□□□□ -2.2
CFT2YLR115W SNN1P48232 102 aa1.29□□□□□ -2.2
CFT2YLR115W BOL2P53082 120 aa1.29□□□□□ -2.2
CFT2YLR115W COA4Q05809 96 aa1.29□□□□□ -2.2
CFT2YLR115W YHR007C-AQ07074 71 aa1.29□□□□□ -2.2
CFT2YLR115W POC4Q12245 148 aaPredicted RBP1.29□□□□□ -2.2
CFT2YLR115W YCL048W-AQ2V2Q2 79 aa1.29□□□□□ -2.2
CFT2YLR115W PFY1P07274 126 aa1.29□□□□□ -2.2
CFT2YLR115W RPB7P34087 171 aa1.28□□□□□ -2.2
CFT2YLR115W YFL051CP43552 160 aa1.28□□□□□ -2.2
CFT2YLR115W SEN15Q04675 128 aa1.28□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms