RNA–Protein interactions for RNA: YLR107W

REX3, Transcript of RNA exonuclease, yeastyeast

Gene REX3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
REX3YLR107W YMR090WQ04304 227 aaKnown RBP1.08□□□□□ -2.24
REX3YLR107W UBC5P15732 148 aa1.07□□□□□ -2.24
REX3YLR107W IMP2P46972 177 aa1.07□□□□□ -2.24
REX3YLR107W SRB6P32570 121 aa1.06□□□□□ -2.24
REX3YLR107W PRP8P33334 2413 aaKnown RBP1.06□□□□□ -2.24
REX3YLR107W YDR210WQ03482 75 aa1.05□□□□□ -2.24
REX3YLR107W YIL086CP40503 102 aa1.04□□□□□ -2.24
REX3YLR107W YDR010CQ12426 110 aa1.04□□□□□ -2.24
REX3YLR107W SEC16P48415 2195 aaKnown RBP1.04□□□□□ -2.24
REX3YLR107W YBR072C-AQ3E794 53 aa1.03□□□□□ -2.24
REX3YLR107W URA2P07259 2214 aaKnown RBP1.02□□□□□ -2.25
REX3YLR107W KRE5P22023 1365 aa1.02□□□□□ -2.25
REX3YLR107W SHU1P38751 150 aa1.02□□□□□ -2.25
REX3YLR107W GCV3P39726 170 aaPredicted RBP1.02□□□□□ -2.25
REX3YLR107W COX19Q3E731 98 aa1.02□□□□□ -2.25
REX3YLR107W YPL038W-AQ3E7B4 63 aa1.02□□□□□ -2.25
REX3YLR107W TY3B-IQ7LHG5 1498 aaKnown RBP1.02□□□□□ -2.25
REX3YLR107W TOP2P06786 1428 aaKnown RBP1□□□□□ -2.25
REX3YLR107W YHR173CP38864 112 aa1□□□□□ -2.25
REX3YLR107W MIX14Q04341 121 aa1□□□□□ -2.25
REX3YLR107W GEA1P47102 1408 aaPredicted RBP0.99□□□□□ -2.25
REX3YLR107W URB1P34241 1764 aaKnown RBP0.99□□□□□ -2.25
REX3YLR107W COX12Q01519 83 aa0.99□□□□□ -2.25
REX3YLR107W MPC2P38857 129 aa0.98□□□□□ -2.25
REX3YLR107W FYV7Q12247 151 aa0.97□□□□□ -2.25
REX3YLR107W YCR095W-AQ3E787 52 aa0.97□□□□□ -2.25
REX3YLR107W KSH1Q8TGJ3 72 aa0.97□□□□□ -2.25
REX3YLR107W YRF1-6P53819 1859 aa0.97□□□□□ -2.25
REX3YLR107W PAU5P43575 122 aa0.96□□□□□ -2.26
REX3YLR107W PDR11P40550 1411 aa0.96□□□□□ -2.26
REX3YLR107W SEC7P11075 2009 aaKnown RBP0.95□□□□□ -2.26
REX3YLR107W RSM19P53733 91 aaPredicted RBP0.94□□□□□ -2.26
REX3YLR107W SRB8P25648 1427 aa0.94□□□□□ -2.26
REX3YLR107W BPT1P14772 1559 aa0.94□□□□□ -2.26
REX3YLR107W ROX3P25046 220 aa0.93□□□□□ -2.26
REX3YLR107W RPS29BP41058 56 aaKnown RBP0.93□□□□□ -2.26
REX3YLR107W SNA2P56508 79 aa0.93□□□□□ -2.26
REX3YLR107W GEA2P39993 1459 aaKnown RBP0.92□□□□□ -2.26
REX3YLR107W YHL005CP38752 130 aa0.92□□□□□ -2.26
REX3YLR107W MRX7P53869 86 aa0.92□□□□□ -2.26
REX3YLR107W YOL164W-AQ3E7A5 60 aa0.92□□□□□ -2.26
REX3YLR107W TY4B-HP0C2J7 1802 aa0.92□□□□□ -2.26
REX3YLR107W YOR289WQ12012 251 aaPredicted RBP0.91□□□□□ -2.26
REX3YLR107W BUD4P47136 1447 aa0.9□□□□□ -2.26
REX3YLR107W SNF2P22082 1703 aa0.9□□□□□ -2.27
REX3YLR107W MRP17P28778 131 aa0.9□□□□□ -2.27
REX3YLR107W MRPL38P35996 138 aaPredicted RBP0.9□□□□□ -2.27
REX3YLR107W ICY1Q04329 127 aa0.9□□□□□ -2.27
REX3YLR107W PAU6P0CE90 120 aa0.89□□□□□ -2.27
REX3YLR107W PAU18P0CE91 120 aa0.89□□□□□ -2.27
REX3YLR107W REV3P14284 1504 aa0.89□□□□□ -2.27
REX3YLR107W RPS11AP0CX47 156 aaKnown RBP0.88□□□□□ -2.27
REX3YLR107W RPS11BP0CX48 156 aaKnown RBP0.88□□□□□ -2.27
REX3YLR107W SSN2P38931 1420 aa0.88□□□□□ -2.27
REX3YLR107W YNR034W-AQ3E841 98 aa0.87□□□□□ -2.27
REX3YLR107W BNI1P41832 1953 aa0.87□□□□□ -2.27
REX3YLR107W HMRA1P0CY11 126 aa0.86□□□□□ -2.27
REX3YLR107W YBL071CP38185 102 aa0.86□□□□□ -2.27
REX3YLR107W YBR292CP38357 123 aa0.86□□□□□ -2.27
REX3YLR107W CAT8P39113 1433 aa0.86□□□□□ -2.27
REX3YLR107W EMC5P40540 141 aa0.85□□□□□ -2.27
REX3YLR107W PAU20Q08322 120 aa0.85□□□□□ -2.27
REX3YLR107W AIM19P40502 157 aa0.84□□□□□ -2.27
REX3YLR107W ZEO1Q08245 113 aa0.83□□□□□ -2.28
REX3YLR107W BRR2P32639 2163 aaKnown RBP0.82□□□□□ -2.28
REX3YLR107W RRT15Q3E811 62 aa0.82□□□□□ -2.28
REX3YLR107W RSF2P46974 1380 aa0.82□□□□□ -2.28
REX3YLR107W NTE1Q04958 1679 aa0.81□□□□□ -2.28
REX3YLR107W RPA12P32529 125 aaKnown RBP0.81□□□□□ -2.28
REX3YLR107W YPL225WQ08971 146 aaKnown RBP0.81□□□□□ -2.28
REX3YLR107W PAU1P0CE88 120 aa0.8□□□□□ -2.28
REX3YLR107W PAU14P0CE89 120 aa0.8□□□□□ -2.28
REX3YLR107W PAU8P0CE92 120 aa0.8□□□□□ -2.28
REX3YLR107W PAU11P0CE93 120 aa0.8□□□□□ -2.28
REX3YLR107W PAU13P38725 120 aa0.8□□□□□ -2.28
REX3YLR107W RSM18P40033 138 aa0.8□□□□□ -2.28
REX3YLR107W SPC1P46965 94 aa0.8□□□□□ -2.28
REX3YLR107W PAU10Q03050 120 aa0.8□□□□□ -2.28
REX3YLR107W NHP10Q03435 203 aa0.8□□□□□ -2.28
REX3YLR107W PAU9Q3E770 120 aa0.8□□□□□ -2.28
REX3YLR107W MSL1P40567 111 aaPredicted RBP0.79□□□□□ -2.28
REX3YLR107W YNL190WP53872 204 aa0.79□□□□□ -2.28
REX3YLR107W POL2P21951 2222 aaKnown RBP0.78□□□□□ -2.28
REX3YLR107W BLM10P43583 2143 aa0.76□□□□□ -2.29
REX3YLR107W PAU4P53427 120 aa0.76□□□□□ -2.29
REX3YLR107W SNU13P39990 126 aaKnown RBP0.74□□□□□ -2.29
REX3YLR107W RPC10P40422 70 aa0.73□□□□□ -2.29
REX3YLR107W YDR042CQ03205 200 aa0.72□□□□□ -2.29
REX3YLR107W YNL198CP40166 100 aa0.71□□□□□ -2.3
REX3YLR107W YDR029WQ12111 104 aa0.71□□□□□ -2.3
REX3YLR107W SUS1Q6WNK7 96 aa0.71□□□□□ -2.3
REX3YLR107W YRF1-1P0CX20 1796 aa0.7□□□□□ -2.3
REX3YLR107W YRF1-5P0CX21 1796 aa0.7□□□□□ -2.3
REX3YLR107W YRF1-8P0CX22 1796 aa0.7□□□□□ -2.3
REX3YLR107W RIM15P43565 1770 aa0.7□□□□□ -2.3
REX3YLR107W FAS2P19097 1887 aaKnown RBP0.7□□□□□ -2.3
REX3YLR107W MYO1P08964 1928 aa0.68□□□□□ -2.3
REX3YLR107W YNL042W-BQ3E7Z2 85 aa0.68□□□□□ -2.3
REX3YLR107W YRF1-2P40105 1681 aa0.68□□□□□ -2.3
REX3YLR107W RPA190P10964 1664 aaKnown RBP0.67□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 35.9 ms