RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W RPS22BQ3E7Y3 130 aaKnown RBP3.81□□□□□ -1.8
CBF1YJR060W YCR023CP25351 611 aa3.8□□□□□ -1.8
CBF1YJR060W PAM17P36147 197 aa3.8□□□□□ -1.8
CBF1YJR060W SPC1P46965 94 aa3.8□□□□□ -1.8
CBF1YJR060W SDS23P53172 527 aa3.8□□□□□ -1.8
CBF1YJR060W DGA1Q08650 418 aa3.8□□□□□ -1.8
CBF1YJR060W GTT1P40582 234 aa3.79□□□□□ -1.8
CBF1YJR060W YPR010C-AA5Z2X5 72 aa3.78□□□□□ -1.8
CBF1YJR060W NSE4P43124 402 aa3.78□□□□□ -1.8
CBF1YJR060W PMP3P87284 55 aa3.78□□□□□ -1.8
CBF1YJR060W YDR115WQ04598 105 aa3.78□□□□□ -1.8
CBF1YJR060W DPP1Q05521 289 aa3.78□□□□□ -1.8
CBF1YJR060W SEC72P39742 193 aaKnown RBP3.77□□□□□ -1.81
CBF1YJR060W GIS2P53849 153 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
CBF1YJR060W FSF1Q12029 327 aaKnown RBP3.77□□□□□ -1.81
CBF1YJR060W UBC5P15732 148 aa3.76□□□□□ -1.81
CBF1YJR060W MRP49P32388 137 aa3.76□□□□□ -1.81
CBF1YJR060W IGD1P43598 195 aa3.76□□□□□ -1.81
CBF1YJR060W YGL118CP53132 145 aa3.76□□□□□ -1.81
CBF1YJR060W WIP1Q2V2P8 89 aa3.76□□□□□ -1.81
CBF1YJR060W YMR122W-AQ3E842 84 aa3.76□□□□□ -1.81
CBF1YJR060W POR1P04840 283 aaKnown RBP3.75□□□□□ -1.81
CBF1YJR060W SEC4P07560 215 aaKnown RBP3.75□□□□□ -1.81
CBF1YJR060W YKR032WP36127 104 aa3.75□□□□□ -1.81
CBF1YJR060W YBR013CP38215 129 aa3.75□□□□□ -1.81
CBF1YJR060W YER076CP40049 302 aa3.75□□□□□ -1.81
CBF1YJR060W DCV1P43595 202 aa3.75□□□□□ -1.81
CBF1YJR060W CGR1P53188 120 aa3.75□□□□□ -1.81
CBF1YJR060W YML108WQ03759 105 aa3.75□□□□□ -1.81
CBF1YJR060W PFY1P07274 126 aa3.74□□□□□ -1.81
CBF1YJR060W ARC15P40518 154 aaRIP-Chip data3.74□□□□□ -1.81not detected
CBF1YJR060W CYT2Q00873 224 aa3.74□□□□□ -1.81
CBF1YJR060W MGR2Q02889 113 aa3.74□□□□□ -1.81
CBF1YJR060W AIM29P36154 155 aa3.73□□□□□ -1.81
CBF1YJR060W RTC6O14464 93 aa3.72□□□□□ -1.81
CBF1YJR060W YKR070WP36151 352 aaKnown RBP3.72□□□□□ -1.81
CBF1YJR060W YNL200CP40165 246 aaKnown RBP3.72□□□□□ -1.81
CBF1YJR060W YJL028WP47062 111 aa3.72□□□□□ -1.81
CBF1YJR060W TOS6P48560 102 aa3.72□□□□□ -1.81
CBF1YJR060W MDN1Q12019 4910 aaKnown RBP3.72□□□□□ -1.81
CBF1YJR060W RPL33AP05744 107 aaKnown RBP3.71□□□□□ -1.82
CBF1YJR060W YAR029WP39549 74 aa3.71□□□□□ -1.82
CBF1YJR060W YIL059CP40520 121 aa3.71□□□□□ -1.82
CBF1YJR060W RPL33BP41056 107 aaKnown RBP3.71□□□□□ -1.82
CBF1YJR060W ERV14P53173 138 aa3.71□□□□□ -1.82
CBF1YJR060W FCF1Q05498 189 aaPredicted RBP3.71□□□□□ -1.82
CBF1YJR060W ERG28P40030 148 aa3.7□□□□□ -1.82
CBF1YJR060W YOR008C-AQ3E7B9 74 aa3.7□□□□□ -1.82
CBF1YJR060W YPR014CQ6B0W2 109 aa3.7□□□□□ -1.82
CBF1YJR060W HTL1Q9URQ5 78 aa3.7□□□□□ -1.82
CBF1YJR060W GSP1P32835 219 aaKnown RBP3.69□□□□□ -1.82
CBF1YJR060W GSP2P32836 220 aaKnown RBP3.69□□□□□ -1.82
CBF1YJR060W YBR209WP38311 105 aa3.69□□□□□ -1.82
CBF1YJR060W YJR146WP47174 117 aa3.69□□□□□ -1.82
CBF1YJR060W YIL014C-AQ02598 104 aa3.69□□□□□ -1.82
CBF1YJR060W YLL066W-BQ8TGJ7 56 aa3.69□□□□□ -1.82
CBF1YJR060W SVP26P38869 228 aa3.68□□□□□ -1.82
CBF1YJR060W OST3P48439 350 aa3.68□□□□□ -1.82
CBF1YJR060W PKR1Q03880 122 aaKnown RBP3.68□□□□□ -1.82
CBF1YJR060W ENV10Q99382 181 aa3.68□□□□□ -1.82
CBF1YJR060W HMRA2P0CY13 119 aa3.67□□□□□ -1.82
CBF1YJR060W ANB1P19211 157 aa3.67□□□□□ -1.82
CBF1YJR060W ARL3Q02804 198 aa3.67□□□□□ -1.82
CBF1YJR060W YMR320WQ04897 101 aa3.67□□□□□ -1.82
CBF1YJR060W MHR1Q06630 226 aa3.67□□□□□ -1.82
CBF1YJR060W CMC2Q3E7A4 109 aa3.67□□□□□ -1.82
CBF1YJR060W YPL229WQ99395 206 aa3.67□□□□□ -1.82
CBF1YJR060W RPL27BP0C2H7 136 aaKnown RBP3.66□□□□□ -1.82
CBF1YJR060W PRE1P22141 198 aaKnown RBP3.66□□□□□ -1.82
CBF1YJR060W YEL045CP32616 141 aa3.66□□□□□ -1.82
CBF1YJR060W YER134CP40081 178 aa3.66□□□□□ -1.82
CBF1YJR060W YGL088WP53151 121 aa3.66□□□□□ -1.82
CBF1YJR060W YDR042CQ03205 200 aa3.66□□□□□ -1.82
CBF1YJR060W APS1P35181 156 aa3.65□□□□□ -1.83
CBF1YJR060W SMP1P38128 452 aa3.65□□□□□ -1.83
CBF1YJR060W YEL008WP40001 126 aa3.65□□□□□ -1.83
CBF1YJR060W CUE4Q04201 117 aaPredicted RBP3.65□□□□□ -1.83
CBF1YJR060W CNL1Q06333 122 aa3.65□□□□□ -1.83
CBF1YJR060W DFM1Q12743 341 aaKnown RBP3.65□□□□□ -1.83
CBF1YJR060W COA3Q3E7B2 85 aa3.65□□□□□ -1.83
CBF1YJR060W YAR023CD6VPM8 179 aa3.64□□□□□ -1.83
CBF1YJR060W SSS1P35179 80 aa3.64□□□□□ -1.83
CBF1YJR060W POP3P53833 195 aaPredicted RBP3.64□□□□□ -1.83
CBF1YJR060W YPR195CQ06594 109 aa3.64□□□□□ -1.83
CBF1YJR060W YLR050CQ12155 161 aaKnown RBP3.64□□□□□ -1.83
CBF1YJR060W YMR175W-AQ3E766 64 aa3.64□□□□□ -1.83
CBF1YJR060W COA6Q3E846 104 aa3.64□□□□□ -1.83
CBF1YJR060W MRPL11P36521 249 aaPredicted RBP3.63□□□□□ -1.83
CBF1YJR060W RPC10P40422 70 aa3.63□□□□□ -1.83
CBF1YJR060W YMR103CQ04436 120 aa3.63□□□□□ -1.83
CBF1YJR060W PAU16P35994 123 aa3.62□□□□□ -1.83
CBF1YJR060W FYV4P38783 130 aaPredicted RBP3.62□□□□□ -1.83
CBF1YJR060W GAT4P40569 121 aa3.62□□□□□ -1.83
CBF1YJR060W CIN5P40917 295 aa3.62□□□□□ -1.83
CBF1YJR060W YLR194CQ05777 254 aa3.62□□□□□ -1.83
CBF1YJR060W RRT15Q3E811 62 aa3.62□□□□□ -1.83
CBF1YJR060W YAL067W-AQ8TGK6 75 aa3.62□□□□□ -1.83
CBF1YJR060W YBR219CP38317 127 aa3.61□□□□□ -1.83
CBF1YJR060W EDC2P40023 145 aaPredicted RBP3.61□□□□□ -1.83
CBF1YJR060W YDR034C-AP0C289 58 aa3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 60.7 ms