RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W NSA2P40078 261 aaKnown RBP2.75□□□□□ -1.97
NUP85YJR042W YGR269WP40326 108 aa2.75□□□□□ -1.97
NUP85YJR042W UPS1Q05776 175 aa2.75□□□□□ -1.97
NUP85YJR042W YNR034W-AQ3E841 98 aa2.75□□□□□ -1.97
NUP85YJR042W ATG40Q99325 256 aa2.75□□□□□ -1.97
NUP85YJR042W FUN14P18411 198 aa2.74□□□□□ -1.97
NUP85YJR042W SEN15Q04675 128 aa2.74□□□□□ -1.97
NUP85YJR042W YNR064CP53750 290 aa2.74□□□□□ -1.97
NUP85YJR042W MIX14Q04341 121 aa2.74□□□□□ -1.97
NUP85YJR042W RIM9Q04734 239 aa2.74□□□□□ -1.97
NUP85YJR042W CYB5P40312 120 aa2.73□□□□□ -1.97
NUP85YJR042W YFR045WP43617 309 aa2.73□□□□□ -1.97
NUP85YJR042W YNR077CP53758 84 aa2.73□□□□□ -1.97
NUP85YJR042W YDL241WQ07738 123 aa2.73□□□□□ -1.97
NUP85YJR042W YOR192C-CQ3E736 78 aa2.73□□□□□ -1.97
NUP85YJR042W YIL134C-AQ45U18 67 aa2.73□□□□□ -1.97
NUP85YJR042W UBC5P15732 148 aa2.73□□□□□ -1.97
NUP85YJR042W MIG1P27705 504 aa2.73□□□□□ -1.97
NUP85YJR042W UTH1P36135 365 aa2.73□□□□□ -1.97
NUP85YJR042W PAM17P36147 197 aa2.73□□□□□ -1.97
NUP85YJR042W SFT2P38166 215 aa2.73□□□□□ -1.97
NUP85YJR042W YHR138CP38841 114 aaPredicted RBP2.73□□□□□ -1.97
NUP85YJR042W RCE1Q03530 315 aa2.73□□□□□ -1.97
NUP85YJR042W YOL118CQ08259 102 aa2.73□□□□□ -1.97
NUP85YJR042W YOR097CQ12274 175 aaPredicted RBP2.73□□□□□ -1.97
NUP85YJR042W YMR230W-AQ3E7B5 62 aa2.73□□□□□ -1.97
NUP85YJR042W RPS25BP0C0T4 108 aaKnown RBP2.72□□□□□ -1.97
NUP85YJR042W ROX3P25046 220 aa2.72□□□□□ -1.97
NUP85YJR042W MRPL11P36521 249 aaPredicted RBP2.72□□□□□ -1.97
NUP85YJR042W YBR090CP38253 122 aa2.72□□□□□ -1.97
NUP85YJR042W YNL217WP40152 326 aa2.72□□□□□ -1.97
NUP85YJR042W YJL027CP47063 138 aaPredicted RBP2.72□□□□□ -1.97
NUP85YJR042W DSK2P48510 373 aa2.72□□□□□ -1.97
NUP85YJR042W YMR007WQ03675 126 aa2.72□□□□□ -1.97
NUP85YJR042W YMR103CQ04436 120 aa2.72□□□□□ -1.97
NUP85YJR042W RPS25AQ3E792 108 aaPredicted RBP2.72□□□□□ -1.97
NUP85YJR042W YNL162W-AQ3E7A8 72 aa2.72□□□□□ -1.97
NUP85YJR042W SCS22Q6Q595 175 aa2.72□□□□□ -1.97
NUP85YJR042W HFA1P32874 2273 aa2.72□□□□□ -1.97
NUP85YJR042W RAD6P06104 172 aa2.72□□□□□ -1.97
NUP85YJR042W HYP2P23301 157 aaKnown RBP2.72□□□□□ -1.97
NUP85YJR042W FZF1P32805 299 aa2.72□□□□□ -1.97
NUP85YJR042W PIR5P46999 287 aa2.72□□□□□ -1.97
NUP85YJR042W YPL067CQ02754 198 aa2.72□□□□□ -1.97
NUP85YJR042W PPT2Q12036 173 aa2.72□□□□□ -1.97
NUP85YJR042W YGL258W-AQ3E740 77 aa2.72□□□□□ -1.97
NUP85YJR042W KTI11Q3E840 82 aa2.72□□□□□ -1.97
NUP85YJR042W YGL010WP25338 174 aa2.71□□□□□ -1.98
NUP85YJR042W FIT3Q08907 204 aa2.71□□□□□ -1.98
NUP85YJR042W RPS22BQ3E7Y3 130 aaKnown RBP2.71□□□□□ -1.98
NUP85YJR042W INO4P13902 151 aa2.7□□□□□ -1.98
NUP85YJR042W FPR2P32472 135 aa2.7□□□□□ -1.98
NUP85YJR042W MRPS8Q03799 155 aa2.7□□□□□ -1.98
NUP85YJR042W YOR105WQ08504 108 aa2.7□□□□□ -1.98
NUP85YJR042W POC4Q12245 148 aaPredicted RBP2.7□□□□□ -1.98
NUP85YJR042W MIC27P50945 234 aa2.7□□□□□ -1.98
NUP85YJR042W LIP1Q03579 150 aa2.7□□□□□ -1.98
NUP85YJR042W SHH3Q04487 196 aa2.7□□□□□ -1.98
NUP85YJR042W RAF1Q06891 181 aa2.7□□□□□ -1.98
NUP85YJR042W SEN1Q00416 2231 aaKnown RBP2.7□□□□□ -1.98
NUP85YJR042W HMRA1P0CY11 126 aa2.69□□□□□ -1.98
NUP85YJR042W YER084WP40057 128 aa2.69□□□□□ -1.98
NUP85YJR042W PAU16P35994 123 aa2.69□□□□□ -1.98
NUP85YJR042W YML122CQ03207 126 aa2.69□□□□□ -1.98
NUP85YJR042W IRC23Q08416 157 aa2.69□□□□□ -1.98
NUP85YJR042W YHR130CP38834 111 aa2.68□□□□□ -1.98
NUP85YJR042W YHR173CP38864 112 aa2.68□□□□□ -1.98
NUP85YJR042W SNF11P38956 169 aa2.68□□□□□ -1.98
NUP85YJR042W SNU13P39990 126 aaKnown RBP2.68□□□□□ -1.98
NUP85YJR042W SIP18P50263 79 aa2.68□□□□□ -1.98
NUP85YJR042W ATP19P81451 68 aa2.68□□□□□ -1.98
NUP85YJR042W YMR295CQ03559 197 aa2.68□□□□□ -1.98
NUP85YJR042W SOD1P00445 154 aaKnown RBP2.68□□□□□ -1.98
NUP85YJR042W YKL044WP36092 106 aa2.68□□□□□ -1.98
NUP85YJR042W YIL163CP40448 117 aa2.68□□□□□ -1.98
NUP85YJR042W YFR035CP43608 114 aa2.68□□□□□ -1.98
NUP85YJR042W PAU23Q07987 124 aa2.68□□□□□ -1.98
NUP85YJR042W PAU17Q12370 124 aa2.68□□□□□ -1.98
NUP85YJR042W HAP3P13434 144 aa2.67□□□□□ -1.98
NUP85YJR042W PRE1P22141 198 aaKnown RBP2.67□□□□□ -1.98
NUP85YJR042W KNH1P50112 268 aa2.66□□□□□ -1.98
NUP85YJR042W NAT5Q08689 176 aa2.66□□□□□ -1.98
NUP85YJR042W YIL059CP40520 121 aa2.66□□□□□ -1.98
NUP85YJR042W YHP1Q04116 353 aa2.66□□□□□ -1.98
NUP85YJR042W FIT2Q08906 153 aa2.66□□□□□ -1.98
NUP85YJR042W YDL157CQ12082 118 aa2.66□□□□□ -1.98
NUP85YJR042W YOS1Q3E834 85 aa2.66□□□□□ -1.98
NUP85YJR042W UTR5P32630 166 aa2.65□□□□□ -1.98
NUP85YJR042W FYV5P25585 152 aa2.65□□□□□ -1.99
NUP85YJR042W YPR117WQ06116 2489 aa2.64□□□□□ -1.99
NUP85YJR042W RPS23AP0CX29 145 aaKnown RBP2.64□□□□□ -1.99
NUP85YJR042W RPS23BP0CX30 145 aa2.64□□□□□ -1.99
NUP85YJR042W YBL071CP38185 102 aa2.64□□□□□ -1.99
NUP85YJR042W YDR114CQ04597 100 aa2.64□□□□□ -1.99
NUP85YJR042W SOM1Q05676 74 aa2.64□□□□□ -1.99
NUP85YJR042W MIC10Q96VH5 97 aa2.64□□□□□ -1.99
NUP85YJR042W TDA2P40045 126 aa2.64□□□□□ -1.99
NUP85YJR042W BRP1P53194 125 aa2.64□□□□□ -1.99
NUP85YJR042W FMP27Q06179 2628 aa2.63□□□□□ -1.99
NUP85YJR042W MRPL31P14063 131 aaPredicted RBP2.63□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms