RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W RPS11BP0CX48 156 aaKnown RBP-0.36□□□□□ -2.47
LOC1YFR001W YDR210WQ03482 75 aa-0.36□□□□□ -2.47
LOC1YFR001W RPO41P13433 1351 aaKnown RBP-0.36□□□□□ -2.47
LOC1YFR001W YPL038W-AQ3E7B4 63 aa-0.37□□□□□ -2.47
LOC1YFR001W ATX1P38636 73 aa-0.38□□□□□ -2.47
LOC1YFR001W PAU15P40585 124 aa-0.39□□□□□ -2.47
LOC1YFR001W YLR042CQ07990 161 aa-0.39□□□□□ -2.47
LOC1YFR001W YCR101CP25607 182 aa-0.4□□□□□ -2.47
LOC1YFR001W YHR138CP38841 114 aaPredicted RBP-0.4□□□□□ -2.47
LOC1YFR001W PAU16P35994 123 aa-0.41□□□□□ -2.48
LOC1YFR001W YNL198CP40166 100 aa-0.42□□□□□ -2.48
LOC1YFR001W YGR164WP53291 111 aa-0.42□□□□□ -2.48
LOC1YFR001W RTR2Q12378 196 aa-0.43□□□□□ -2.48
LOC1YFR001W HUR1P45820 110 aa-0.45□□□□□ -2.48
LOC1YFR001W TY1B-BLQ12490 1755 aa-0.45□□□□□ -2.48
LOC1YFR001W YLR419WQ06698 1435 aaKnown RBP-0.46□□□□□ -2.48
LOC1YFR001W YRF1-2P40105 1681 aa-0.46□□□□□ -2.48
LOC1YFR001W BUD23P25627 275 aaPredicted RBP-0.46□□□□□ -2.48
LOC1YFR001W COX12Q01519 83 aa-0.46□□□□□ -2.48
LOC1YFR001W APS2Q00381 147 aa-0.47□□□□□ -2.48
LOC1YFR001W YFR009W-AP0C5M9 85 aa-0.48□□□□□ -2.49
LOC1YFR001W MRPL38P35996 138 aaPredicted RBP-0.48□□□□□ -2.49
LOC1YFR001W YBR016WP38216 128 aa-0.48□□□□□ -2.49
LOC1YFR001W RPC10P40422 70 aa-0.48□□□□□ -2.49
LOC1YFR001W VMA21P41806 77 aa-0.48□□□□□ -2.49
LOC1YFR001W SRB6P32570 121 aa-0.49□□□□□ -2.49
LOC1YFR001W MRX7P53869 86 aa-0.49□□□□□ -2.49
LOC1YFR001W YIR021W-AQ3E739 70 aa-0.49□□□□□ -2.49
LOC1YFR001W SGF11Q03067 99 aa-0.5□□□□□ -2.49
LOC1YFR001W ICY1Q04329 127 aa-0.5□□□□□ -2.49
LOC1YFR001W SWC7Q06707 132 aa-0.52□□□□□ -2.49
LOC1YFR001W WIP1Q2V2P8 89 aa-0.52□□□□□ -2.49
LOC1YFR001W SSN2P38931 1420 aa-0.54□□□□□ -2.5
LOC1YFR001W SRB8P25648 1427 aa-0.55□□□□□ -2.5
LOC1YFR001W YCR095W-AQ3E787 52 aa-0.55□□□□□ -2.5
LOC1YFR001W YBR292CP38357 123 aa-0.56□□□□□ -2.5
LOC1YFR001W RSM18P40033 138 aa-0.56□□□□□ -2.5
LOC1YFR001W PAU6P0CE90 120 aa-0.57□□□□□ -2.5
LOC1YFR001W PAU18P0CE91 120 aa-0.57□□□□□ -2.5
LOC1YFR001W SNA2P56508 79 aa-0.57□□□□□ -2.5
LOC1YFR001W PAU20Q08322 120 aa-0.58□□□□□ -2.5
LOC1YFR001W MIC10Q96VH5 97 aa-0.58□□□□□ -2.5
LOC1YFR001W YRF1-1P0CX20 1796 aa-0.59□□□□□ -2.5
LOC1YFR001W YRF1-5P0CX21 1796 aa-0.59□□□□□ -2.5
LOC1YFR001W YRF1-8P0CX22 1796 aa-0.59□□□□□ -2.5
LOC1YFR001W MRP17P28778 131 aa-0.59□□□□□ -2.5
LOC1YFR001W YNR034W-AQ3E841 98 aa-0.59□□□□□ -2.5
LOC1YFR001W CAT8P39113 1433 aa-0.59□□□□□ -2.5
LOC1YFR001W YJR107C-AP0CT86 78 aa-0.6□□□□□ -2.51
LOC1YFR001W YIL134C-AQ45U18 67 aa-0.61□□□□□ -2.51
LOC1YFR001W YER039C-AP0CD97 72 aa-0.62□□□□□ -2.51
LOC1YFR001W YOS1Q3E834 85 aa-0.62□□□□□ -2.51
LOC1YFR001W LYS2P07702 1392 aa-0.62□□□□□ -2.51
LOC1YFR001W PAU5P43575 122 aa-0.63□□□□□ -2.51
LOC1YFR001W KRE5P22023 1365 aa-0.63□□□□□ -2.51
LOC1YFR001W NTE1Q04958 1679 aa-0.64□□□□□ -2.51
LOC1YFR001W SPP41P38904 1435 aa-0.65□□□□□ -2.51
LOC1YFR001W YBL071CP38185 102 aa-0.66□□□□□ -2.52
LOC1YFR001W RPL38P49167 78 aaKnown RBP-0.66□□□□□ -2.52
LOC1YFR001W BPT1P14772 1559 aa-0.66□□□□□ -2.52
LOC1YFR001W RSF2P46974 1380 aa-0.68□□□□□ -2.52
LOC1YFR001W ROX3P25046 220 aa-0.68□□□□□ -2.52
LOC1YFR001W YOR304C-AO14468 76 aa-0.69□□□□□ -2.52
LOC1YFR001W PAU1P0CE88 120 aa-0.69□□□□□ -2.52
LOC1YFR001W PAU14P0CE89 120 aa-0.69□□□□□ -2.52
LOC1YFR001W PAU8P0CE92 120 aa-0.69□□□□□ -2.52
LOC1YFR001W PAU11P0CE93 120 aa-0.69□□□□□ -2.52
LOC1YFR001W PAU13P38725 120 aa-0.69□□□□□ -2.52
LOC1YFR001W AIM19P40502 157 aa-0.69□□□□□ -2.52
LOC1YFR001W GNA1P43577 159 aaPredicted RBP-0.69□□□□□ -2.52
LOC1YFR001W PAU10Q03050 120 aa-0.69□□□□□ -2.52
LOC1YFR001W PAU9Q3E770 120 aa-0.69□□□□□ -2.52
LOC1YFR001W UBC4P15731 148 aa-0.7□□□□□ -2.52
LOC1YFR001W YMR103CQ04436 120 aa-0.7□□□□□ -2.52
LOC1YFR001W TY1B-LR3P0C2I6 1755 aaKnown RBP-0.71□□□□□ -2.52
LOC1YFR001W TY1B-PR3P0C2J1 1755 aaKnown RBP-0.71□□□□□ -2.52
LOC1YFR001W BUD4P47136 1447 aa-0.73□□□□□ -2.53
LOC1YFR001W PDX3P38075 228 aaKnown RBP-0.74□□□□□ -2.53
LOC1YFR001W UBC5P15732 148 aa-0.75□□□□□ -2.53
LOC1YFR001W PAU4P53427 120 aa-0.75□□□□□ -2.53
LOC1YFR001W YMR090WQ04304 227 aaKnown RBP-0.75□□□□□ -2.53
LOC1YFR001W RSM19P53733 91 aaPredicted RBP-0.76□□□□□ -2.53
LOC1YFR001W UTP20P35194 2493 aaKnown RBP-0.77□□□□□ -2.53
LOC1YFR001W TY1B-BRQ12193 1756 aa-0.77□□□□□ -2.53
LOC1YFR001W LHP1P33399 275 aaKnown RBP-0.77□□□□□ -2.53
LOC1YFR001W YCR108CQ3E819 63 aa-0.77□□□□□ -2.53
LOC1YFR001W Q0032Q9ZZX7 96 aa-0.77□□□□□ -2.53
LOC1YFR001W COX7P10174 60 aa-0.78□□□□□ -2.53
LOC1YFR001W SPC1P46965 94 aa-0.78□□□□□ -2.53
LOC1YFR001W NHP10Q03435 203 aa-0.78□□□□□ -2.53
LOC1YFR001W YNL042W-BQ3E7Z2 85 aa-0.78□□□□□ -2.53
LOC1YFR001W SEN1Q00416 2231 aaKnown RBP-0.79□□□□□ -2.54
LOC1YFR001W TY3B-IQ7LHG5 1498 aaKnown RBP-0.79□□□□□ -2.54
LOC1YFR001W MIX14Q04341 121 aa-0.79□□□□□ -2.54
LOC1YFR001W YHL005CP38752 130 aa-0.82□□□□□ -2.54
LOC1YFR001W YDR381C-AQ3E6R5 114 aa-0.82□□□□□ -2.54
LOC1YFR001W YOR289WQ12012 251 aaPredicted RBP-0.83□□□□□ -2.54
LOC1YFR001W YBR090CP38253 122 aa-0.84□□□□□ -2.54
LOC1YFR001W YBR201C-AQ2V2Q3 67 aa-0.84□□□□□ -2.54
LOC1YFR001W EMC5P40540 141 aa-0.85□□□□□ -2.55
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms