RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM4, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM4YER112W CCW14O13547 238 aa0.15□□□□□ -2.39
LSM4YER112W MPC2P38857 129 aa0.14□□□□□ -2.39
LSM4YER112W VMA21P41806 77 aa0.14□□□□□ -2.39
LSM4YER112W YLR419WQ06698 1435 aaKnown RBP0.13□□□□□ -2.39
LSM4YER112W HUR1P45820 110 aa0.13□□□□□ -2.39
LSM4YER112W RUB1Q03919 77 aa0.12□□□□□ -2.39
LSM4YER112W WIP1Q2V2P8 89 aa0.12□□□□□ -2.39
LSM4YER112W YPL038W-AQ3E7B4 63 aa0.12□□□□□ -2.39
LSM4YER112W RPO41P13433 1351 aaKnown RBP0.11□□□□□ -2.39
LSM4YER112W ATX1P38636 73 aa0.11□□□□□ -2.39
LSM4YER112W PAU15P40585 124 aa0.11□□□□□ -2.39
LSM4YER112W SRB6P32570 121 aa0.1□□□□□ -2.39
LSM4YER112W YDR210WQ03482 75 aa0.1□□□□□ -2.39
LSM4YER112W SWC7Q06707 132 aa0.1□□□□□ -2.39
LSM4YER112W YCR101CP25607 182 aa0.09□□□□□ -2.4
LSM4YER112W PAU16P35994 123 aa0.09□□□□□ -2.4
LSM4YER112W COX12Q01519 83 aa0.09□□□□□ -2.4
LSM4YER112W YIR021W-AQ3E739 70 aa0.08□□□□□ -2.4
LSM4YER112W RPS11AP0CX47 156 aaKnown RBP0.07□□□□□ -2.4
LSM4YER112W RPS11BP0CX48 156 aaKnown RBP0.07□□□□□ -2.4
LSM4YER112W TY1B-BLQ12490 1755 aa0.06□□□□□ -2.4
LSM4YER112W YRF1-2P40105 1681 aa0.06□□□□□ -2.4
LSM4YER112W BUD23P25627 275 aaPredicted RBP0.06□□□□□ -2.4
LSM4YER112W SPP41P38904 1435 aa0.04□□□□□ -2.4
LSM4YER112W MRX7P53869 86 aa0.03□□□□□ -2.4
LSM4YER112W NTE1Q04958 1679 aa0.02□□□□□ -2.41
LSM4YER112W YNL198CP40166 100 aa0.01□□□□□ -2.41
LSM4YER112W SSN2P38931 1420 aa0.01□□□□□ -2.41
LSM4YER112W SRB8P25648 1427 aa0□□□□□ -2.41
LSM4YER112W YBR292CP38357 123 aa-0.01□□□□□ -2.41
LSM4YER112W BPT1P14772 1559 aa-0.02□□□□□ -2.41
LSM4YER112W MRP17P28778 131 aa-0.02□□□□□ -2.41
LSM4YER112W MRPL38P35996 138 aaPredicted RBP-0.02□□□□□ -2.41
LSM4YER112W SNA2P56508 79 aa-0.02□□□□□ -2.41
LSM4YER112W ICY1Q04329 127 aa-0.02□□□□□ -2.41
LSM4YER112W YCR095W-AQ3E787 52 aa-0.02□□□□□ -2.41
LSM4YER112W YOS1Q3E834 85 aa-0.02□□□□□ -2.41
LSM4YER112W YRF1-1P0CX20 1796 aa-0.03□□□□□ -2.41
LSM4YER112W YRF1-5P0CX21 1796 aa-0.03□□□□□ -2.41
LSM4YER112W YRF1-8P0CX22 1796 aa-0.03□□□□□ -2.41
LSM4YER112W YER039C-AP0CD97 72 aa-0.03□□□□□ -2.41
LSM4YER112W LYS2P07702 1392 aa-0.04□□□□□ -2.42
LSM4YER112W YOR304C-AO14468 76 aa-0.05□□□□□ -2.42
LSM4YER112W GNA1P43577 159 aaPredicted RBP-0.06□□□□□ -2.42
LSM4YER112W KRE5P22023 1365 aa-0.06□□□□□ -2.42
LSM4YER112W PAU20Q08322 120 aa-0.07□□□□□ -2.42
LSM4YER112W MIC10Q96VH5 97 aa-0.07□□□□□ -2.42
LSM4YER112W YFR009W-AP0C5M9 85 aa-0.09□□□□□ -2.42
LSM4YER112W RPC10P40422 70 aa-0.09□□□□□ -2.42
LSM4YER112W RSM18P40033 138 aa-0.1□□□□□ -2.43
LSM4YER112W YBR016WP38216 128 aa-0.11□□□□□ -2.43
LSM4YER112W YMR090WQ04304 227 aaKnown RBP-0.11□□□□□ -2.43
LSM4YER112W PAU6P0CE90 120 aa-0.12□□□□□ -2.43
LSM4YER112W PAU18P0CE91 120 aa-0.12□□□□□ -2.43
LSM4YER112W UBC4P15731 148 aa-0.12□□□□□ -2.43
LSM4YER112W YNR034W-AQ3E841 98 aa-0.12□□□□□ -2.43
LSM4YER112W TY3B-IQ7LHG5 1498 aaKnown RBP-0.12□□□□□ -2.43
LSM4YER112W YBR056W-AI2HB52 66 aa-0.13□□□□□ -2.43
LSM4YER112W AIM19P40502 157 aa-0.13□□□□□ -2.43
LSM4YER112W YMR103CQ04436 120 aa-0.13□□□□□ -2.43
LSM4YER112W PAU5P43575 122 aa-0.14□□□□□ -2.43
LSM4YER112W UBC5P15732 148 aa-0.15□□□□□ -2.43
LSM4YER112W ROX3P25046 220 aa-0.15□□□□□ -2.43
LSM4YER112W SGF11Q03067 99 aa-0.15□□□□□ -2.43
LSM4YER112W YBL071CP38185 102 aa-0.16□□□□□ -2.44
LSM4YER112W RPL38P49167 78 aaKnown RBP-0.16□□□□□ -2.44
LSM4YER112W CAT8P39113 1433 aa-0.16□□□□□ -2.44
LSM4YER112W TY1B-BRQ12193 1756 aa-0.17□□□□□ -2.44
LSM4YER112W PAU1P0CE88 120 aa-0.17□□□□□ -2.44
LSM4YER112W PAU14P0CE89 120 aa-0.17□□□□□ -2.44
LSM4YER112W PAU8P0CE92 120 aa-0.17□□□□□ -2.44
LSM4YER112W PAU11P0CE93 120 aa-0.17□□□□□ -2.44
LSM4YER112W LHP1P33399 275 aaKnown RBP-0.17□□□□□ -2.44
LSM4YER112W PAU13P38725 120 aa-0.17□□□□□ -2.44
LSM4YER112W PAU10Q03050 120 aa-0.17□□□□□ -2.44
LSM4YER112W MIX14Q04341 121 aa-0.17□□□□□ -2.44
LSM4YER112W PAU9Q3E770 120 aa-0.17□□□□□ -2.44
LSM4YER112W YJR107C-AP0CT86 78 aa-0.18□□□□□ -2.44
LSM4YER112W BUD4P47136 1447 aa-0.2□□□□□ -2.44
LSM4YER112W PDX3P38075 228 aaKnown RBP-0.2□□□□□ -2.44
LSM4YER112W YIL134C-AQ45U18 67 aa-0.2□□□□□ -2.44
LSM4YER112W GEA1P47102 1408 aaPredicted RBP-0.21□□□□□ -2.44
LSM4YER112W TY1B-LR3P0C2I6 1755 aaKnown RBP-0.21□□□□□ -2.44
LSM4YER112W TY1B-PR3P0C2J1 1755 aaKnown RBP-0.21□□□□□ -2.44
LSM4YER112W RPS12P48589 143 aaKnown RBP-0.21□□□□□ -2.44
LSM4YER112W RSM19P53733 91 aaPredicted RBP-0.21□□□□□ -2.44
LSM4YER112W TSC11P40061 1430 aa-0.21□□□□□ -2.44
LSM4YER112W YHL005CP38752 130 aa-0.22□□□□□ -2.44
LSM4YER112W YBR090CP38253 122 aa-0.23□□□□□ -2.45
LSM4YER112W PAU4P53427 120 aa-0.23□□□□□ -2.45
LSM4YER112W COX7P10174 60 aa-0.24□□□□□ -2.45
LSM4YER112W EMC5P40540 141 aa-0.24□□□□□ -2.45
LSM4YER112W PDR11P40550 1411 aa-0.25□□□□□ -2.45
LSM4YER112W MDS3P53094 1487 aa-0.25□□□□□ -2.45
LSM4YER112W DNF3Q12674 1656 aa-0.27□□□□□ -2.45
LSM4YER112W YER137CP40083 148 aaKnown RBP-0.27□□□□□ -2.45
LSM4YER112W RSF2P46974 1380 aa-0.28□□□□□ -2.45
LSM4YER112W SPC1P46965 94 aa-0.28□□□□□ -2.45
LSM4YER112W YOR289WQ12012 251 aaPredicted RBP-0.28□□□□□ -2.45
LSM4YER112W YNL042W-BQ3E7Z2 85 aa-0.28□□□□□ -2.45
Retrieved 100 of 5,963 RNA–protein pairs in 49.7 ms